EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001022610 (Gene tree)
Gene ID: -
Gene Symbol: Snrnp200
Alias: A330064G03Rik|Ascc3l1|HELIC2|U5-200KD
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 29928 bases
Position: chrscaffold_3:27445030-27474957
Accession: 100758820
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001024870	ResIII	PF04851.15	2.4e-25	1	2
ENSCGRP00001024870	ResIII	PF04851.15	2.4e-25	2	2
ENSCGRP00001024862	ResIII	PF04851.15	2.4e-25	1	2
ENSCGRP00001024862	ResIII	PF04851.15	2.4e-25	2	2
ENSCGRP00001024870	DEAD	PF00270.29	1.7e-52	1	2
ENSCGRP00001024870	DEAD	PF00270.29	1.7e-52	2	2
ENSCGRP00001024862	DEAD	PF00270.29	1.7e-52	1	2
ENSCGRP00001024862	DEAD	PF00270.29	1.7e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001029116	-	6411	XM_007639842	ENSCGRP00001024870	2136 (aa)	XP_007638032	-
ENSCGRT00001029108	-	6414	-	ENSCGRP00001024862	2137 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001022610's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001022610's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001022610	Snrnp200	72	31.882	ENSCGRG00001016995	Hfm1	57	31.882
ENSCGRG00001022610	Snrnp200	86	42.084	ENSCGRG00001000918	Ascc3	80	44.332

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001022610	Snrnp200	100	99.766	ENSG00000144028	SNRNP200	100	99.766	Homo_sapiens
ENSCGRG00001022610	Snrnp200	99	90.888	ENSAPOG00000010223	snrnp200	99	90.777	Acanthochromis_polyacanthus
ENSCGRG00001022610	Snrnp200	100	99.719	ENSAMEG00000008996	SNRNP200	100	99.719	Ailuropoda_melanoleuca
ENSCGRG00001022610	Snrnp200	97	90.257	ENSACIG00000001764	snrnp200	98	90.257	Amphilophus_citrinellus
ENSCGRG00001022610	Snrnp200	99	90.794	ENSAOCG00000024593	snrnp200	100	90.043	Amphiprion_ocellaris
ENSCGRG00001022610	Snrnp200	97	90.096	ENSAPEG00000012554	snrnp200	100	90.096	Amphiprion_percula
ENSCGRG00001022610	Snrnp200	99	90.653	ENSATEG00000022522	snrnp200	99	90.543	Anabas_testudineus
ENSCGRG00001022610	Snrnp200	99	97.690	ENSAPLG00000004313	SNRNP200	100	97.690	Anas_platyrhynchos
ENSCGRG00001022610	Snrnp200	99	97.381	ENSACAG00000000434	SNRNP200	100	97.381	Anolis_carolinensis
ENSCGRG00001022610	Snrnp200	100	95.154	ENSANAG00000036625	SNRNP200	100	95.662	Aotus_nancymaae
ENSCGRG00001022610	Snrnp200	99	90.512	ENSACLG00000011188	snrnp200	99	90.403	Astatotilapia_calliptera
ENSCGRG00001022610	Snrnp200	99	90.606	ENSAMXG00000005684	snrnp200	99	90.496	Astyanax_mexicanus
ENSCGRG00001022610	Snrnp200	100	99.251	ENSBTAG00000000848	SNRNP200	100	99.251	Bos_taurus
ENSCGRG00001022610	Snrnp200	100	99.719	ENSCJAG00000007514	SNRNP200	100	99.719	Callithrix_jacchus
ENSCGRG00001022610	Snrnp200	100	98.927	ENSCAFG00020019979	SNRNP200	100	99.767	Canis_lupus_dingo
ENSCGRG00001022610	Snrnp200	100	99.438	ENSCHIG00000020611	SNRNP200	100	99.438	Capra_hircus
ENSCGRG00001022610	Snrnp200	100	99.766	ENSTSYG00000010467	SNRNP200	100	99.766	Carlito_syrichta
ENSCGRG00001022610	Snrnp200	99	99.389	ENSCAPG00000017234	SNRNP200	99	99.389	Cavia_aperea
ENSCGRG00001022610	Snrnp200	100	99.672	ENSCPOG00000006776	SNRNP200	100	99.672	Cavia_porcellus
ENSCGRG00001022610	Snrnp200	100	99.719	ENSCCAG00000033962	SNRNP200	100	99.719	Cebus_capucinus
ENSCGRG00001022610	Snrnp200	100	99.766	ENSCATG00000015790	SNRNP200	100	99.766	Cercocebus_atys
ENSCGRG00001022610	Snrnp200	100	99.532	ENSCLAG00000004116	SNRNP200	100	99.532	Chinchilla_lanigera
ENSCGRG00001022610	Snrnp200	100	99.719	ENSCSAG00000017369	SNRNP200	100	99.719	Chlorocebus_sabaeus
ENSCGRG00001022610	Snrnp200	75	99.213	ENSCHOG00000012981	-	59	99.213	Choloepus_hoffmanni
ENSCGRG00001022610	Snrnp200	100	97.616	ENSCPBG00000022571	SNRNP200	100	97.616	Chrysemys_picta_bellii
ENSCGRG00001022610	Snrnp200	99	76.506	ENSCING00000005082	-	99	76.646	Ciona_intestinalis
ENSCGRG00001022610	Snrnp200	100	94.255	ENSCANG00000033932	SNRNP200	100	99.701	Colobus_angolensis_palliatus
ENSCGRG00001022610	Snrnp200	100	99.532	ENSCGRG00000016472	Snrnp200	100	99.532	Cricetulus_griseus_crigri
ENSCGRG00001022610	Snrnp200	100	89.934	ENSCSEG00000016399	snrnp200	100	89.934	Cynoglossus_semilaevis
ENSCGRG00001022610	Snrnp200	100	85.627	ENSCVAG00000017631	snrnp200	99	85.627	Cyprinodon_variegatus
ENSCGRG00001022610	Snrnp200	100	90.356	ENSDARG00000077536	snrnp200	99	90.356	Danio_rerio
ENSCGRG00001022610	Snrnp200	100	98.221	ENSDNOG00000011227	SNRNP200	100	98.221	Dasypus_novemcinctus
ENSCGRG00001022610	Snrnp200	100	97.148	ENSDORG00000005861	Snrnp200	100	97.148	Dipodomys_ordii
ENSCGRG00001022610	Snrnp200	100	74.255	FBgn0263599	l(3)72Ab	99	74.162	Drosophila_melanogaster
ENSCGRG00001022610	Snrnp200	95	99.483	ENSETEG00000000162	SNRNP200	74	99.483	Echinops_telfairi
ENSCGRG00001022610	Snrnp200	83	81.256	ENSEBUG00000016524	snrnp200	95	81.256	Eptatretus_burgeri
ENSCGRG00001022610	Snrnp200	100	98.601	ENSEASG00005001884	SNRNP200	100	98.601	Equus_asinus_asinus
ENSCGRG00001022610	Snrnp200	100	99.719	ENSECAG00000019675	SNRNP200	100	99.719	Equus_caballus
ENSCGRG00001022610	Snrnp200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSCGRG00001022610	Snrnp200	99	90.841	ENSELUG00000018948	snrnp200	99	90.730	Esox_lucius
ENSCGRG00001022610	Snrnp200	100	99.766	ENSFCAG00000010699	SNRNP200	100	99.766	Felis_catus
ENSCGRG00001022610	Snrnp200	95	89.995	ENSFALG00000001368	-	95	92.857	Ficedula_albicollis
ENSCGRG00001022610	Snrnp200	100	99.579	ENSFDAG00000004683	SNRNP200	100	99.579	Fukomys_damarensis
ENSCGRG00001022610	Snrnp200	100	87.781	ENSFHEG00000003786	snrnp200	99	87.781	Fundulus_heteroclitus
ENSCGRG00001022610	Snrnp200	100	89.673	ENSGMOG00000004881	snrnp200	99	89.626	Gadus_morhua
ENSCGRG00001022610	Snrnp200	100	88.015	ENSGAFG00000010807	snrnp200	99	88.015	Gambusia_affinis
ENSCGRG00001022610	Snrnp200	100	90.005	ENSGACG00000011474	snrnp200	99	89.911	Gasterosteus_aculeatus
ENSCGRG00001022610	Snrnp200	95	97.584	ENSGAGG00000016069	SNRNP200	99	97.584	Gopherus_agassizii
ENSCGRG00001022610	Snrnp200	100	99.766	ENSGGOG00000005174	SNRNP200	100	99.766	Gorilla_gorilla
ENSCGRG00001022610	Snrnp200	97	87.780	ENSHBUG00000011322	snrnp200	99	87.827	Haplochromis_burtoni
ENSCGRG00001022610	Snrnp200	100	99.672	ENSHGLG00000006654	SNRNP200	100	99.672	Heterocephalus_glaber_female
ENSCGRG00001022610	Snrnp200	100	99.672	ENSHGLG00100018594	SNRNP200	100	99.672	Heterocephalus_glaber_male
ENSCGRG00001022610	Snrnp200	100	99.719	ENSSTOG00000016351	SNRNP200	100	99.719	Ictidomys_tridecemlineatus
ENSCGRG00001022610	Snrnp200	100	99.625	ENSJJAG00000023659	Snrnp200	100	99.625	Jaculus_jaculus
ENSCGRG00001022610	Snrnp200	100	87.541	ENSKMAG00000003665	snrnp200	99	87.541	Kryptolebias_marmoratus
ENSCGRG00001022610	Snrnp200	100	90.262	ENSLBEG00000021585	snrnp200	99	90.262	Labrus_bergylta
ENSCGRG00001022610	Snrnp200	82	94.664	ENSLACG00000000226	SNRNP200	99	94.664	Latimeria_chalumnae
ENSCGRG00001022610	Snrnp200	100	92.088	ENSLOCG00000015198	snrnp200	99	92.088	Lepisosteus_oculatus
ENSCGRG00001022610	Snrnp200	100	99.438	ENSLAFG00000015626	SNRNP200	100	99.438	Loxodonta_africana
ENSCGRG00001022610	Snrnp200	100	99.719	ENSMFAG00000040174	SNRNP200	100	99.719	Macaca_fascicularis
ENSCGRG00001022610	Snrnp200	100	99.719	ENSMMUG00000023261	SNRNP200	100	99.719	Macaca_mulatta
ENSCGRG00001022610	Snrnp200	100	99.672	ENSMNEG00000032398	SNRNP200	100	99.672	Macaca_nemestrina
ENSCGRG00001022610	Snrnp200	100	99.766	ENSMLEG00000019083	SNRNP200	100	99.766	Mandrillus_leucophaeus
ENSCGRG00001022610	Snrnp200	100	90.220	ENSMAMG00000007851	snrnp200	99	90.173	Mastacembelus_armatus
ENSCGRG00001022610	Snrnp200	97	87.780	ENSMZEG00005010787	snrnp200	99	87.827	Maylandia_zebra
ENSCGRG00001022610	Snrnp200	97	97.242	ENSMGAG00000001831	SNRNP200	100	97.242	Meleagris_gallopavo
ENSCGRG00001022610	Snrnp200	100	99.953	ENSMAUG00000011825	Snrnp200	100	99.953	Mesocricetus_auratus
ENSCGRG00001022610	Snrnp200	100	99.719	ENSMICG00000004710	SNRNP200	100	99.719	Microcebus_murinus
ENSCGRG00001022610	Snrnp200	100	97.378	ENSMOCG00000011814	Snrnp200	100	97.378	Microtus_ochrogaster
ENSCGRG00001022610	Snrnp200	99	89.009	ENSMMOG00000014167	snrnp200	99	88.904	Mola_mola
ENSCGRG00001022610	Snrnp200	100	98.830	ENSMODG00000008475	SNRNP200	100	98.830	Monodelphis_domestica
ENSCGRG00001022610	Snrnp200	99	90.794	ENSMALG00000001973	snrnp200	99	90.684	Monopterus_albus
ENSCGRG00001022610	Snrnp200	100	99.766	MGP_CAROLIEiJ_G0024250	Snrnp200	100	99.766	Mus_caroli
ENSCGRG00001022610	Snrnp200	100	99.813	ENSMUSG00000003660	Snrnp200	100	99.813	Mus_musculus
ENSCGRG00001022610	Snrnp200	100	99.860	MGP_PahariEiJ_G0025695	Snrnp200	100	99.860	Mus_pahari
ENSCGRG00001022610	Snrnp200	100	99.813	MGP_SPRETEiJ_G0025170	Snrnp200	100	100.000	Mus_spretus
ENSCGRG00001022610	Snrnp200	100	99.672	ENSMPUG00000008949	SNRNP200	100	99.672	Mustela_putorius_furo
ENSCGRG00001022610	Snrnp200	100	99.018	ENSMLUG00000010493	SNRNP200	100	99.018	Myotis_lucifugus
ENSCGRG00001022610	Snrnp200	100	95.318	ENSMLUG00000027511	-	100	95.318	Myotis_lucifugus
ENSCGRG00001022610	Snrnp200	100	99.860	ENSNGAG00000021993	Snrnp200	100	99.860	Nannospalax_galili
ENSCGRG00001022610	Snrnp200	90	90.261	ENSNBRG00000017960	snrnp200	98	90.261	Neolamprologus_brichardi
ENSCGRG00001022610	Snrnp200	100	95.119	ENSNLEG00000000025	SNRNP200	100	95.137	Nomascus_leucogenys
ENSCGRG00001022610	Snrnp200	100	100.000	ENSMEUG00000010532	SNRNP200	79	100.000	Notamacropus_eugenii
ENSCGRG00001022610	Snrnp200	100	95.833	ENSOPRG00000015464	SNRNP200	100	95.833	Ochotona_princeps
ENSCGRG00001022610	Snrnp200	100	99.532	ENSODEG00000008366	SNRNP200	100	99.532	Octodon_degus
ENSCGRG00001022610	Snrnp200	99	90.512	ENSONIG00000010714	snrnp200	99	90.403	Oreochromis_niloticus
ENSCGRG00001022610	Snrnp200	100	99.625	ENSOCUG00000009864	SNRNP200	100	99.625	Oryctolagus_cuniculus
ENSCGRG00001022610	Snrnp200	100	90.309	ENSORLG00000012286	snrnp200	100	90.309	Oryzias_latipes
ENSCGRG00001022610	Snrnp200	100	90.356	ENSORLG00020004648	snrnp200	100	90.356	Oryzias_latipes_hni
ENSCGRG00001022610	Snrnp200	100	90.309	ENSORLG00015019114	snrnp200	100	90.309	Oryzias_latipes_hsok
ENSCGRG00001022610	Snrnp200	99	90.559	ENSOMEG00000011834	snrnp200	99	90.449	Oryzias_melastigma
ENSCGRG00001022610	Snrnp200	100	99.766	ENSOGAG00000006879	SNRNP200	100	99.766	Otolemur_garnettii
ENSCGRG00001022610	Snrnp200	100	98.409	ENSOARG00000013949	SNRNP200	100	98.409	Ovis_aries
ENSCGRG00001022610	Snrnp200	100	99.766	ENSPPAG00000041559	SNRNP200	100	99.766	Pan_paniscus
ENSCGRG00001022610	Snrnp200	100	99.766	ENSPPRG00000004435	SNRNP200	100	99.766	Panthera_pardus
ENSCGRG00001022610	Snrnp200	100	99.298	ENSPTIG00000006380	SNRNP200	100	99.298	Panthera_tigris_altaica
ENSCGRG00001022610	Snrnp200	100	99.766	ENSPTRG00000012230	SNRNP200	100	99.766	Pan_troglodytes
ENSCGRG00001022610	Snrnp200	100	99.719	ENSPANG00000006017	SNRNP200	100	99.719	Papio_anubis
ENSCGRG00001022610	Snrnp200	100	91.105	ENSPKIG00000014762	snrnp200	99	91.105	Paramormyrops_kingsleyae
ENSCGRG00001022610	Snrnp200	100	96.584	ENSPSIG00000008580	SNRNP200	100	96.584	Pelodiscus_sinensis
ENSCGRG00001022610	Snrnp200	100	98.830	ENSPCIG00000023050	SNRNP200	100	98.830	Phascolarctos_cinereus
ENSCGRG00001022610	Snrnp200	100	90.360	ENSPFOG00000015110	snrnp200	99	90.360	Poecilia_formosa
ENSCGRG00001022610	Snrnp200	97	90.220	ENSPLAG00000006711	snrnp200	99	90.220	Poecilia_latipinna
ENSCGRG00001022610	Snrnp200	97	90.165	ENSPMEG00000021166	snrnp200	99	90.165	Poecilia_mexicana
ENSCGRG00001022610	Snrnp200	100	90.449	ENSPREG00000008875	snrnp200	99	90.449	Poecilia_reticulata
ENSCGRG00001022610	Snrnp200	100	99.766	ENSPPYG00000012068	SNRNP200	100	99.766	Pongo_abelii
ENSCGRG00001022610	Snrnp200	97	98.718	ENSPCAG00000008536	SNRNP200	89	98.718	Procavia_capensis
ENSCGRG00001022610	Snrnp200	100	99.766	ENSPCOG00000024608	SNRNP200	100	99.766	Propithecus_coquereli
ENSCGRG00001022610	Snrnp200	96	99.660	ENSPVAG00000005860	SNRNP200	93	99.660	Pteropus_vampyrus
ENSCGRG00001022610	Snrnp200	99	85.995	ENSPNYG00000017476	snrnp200	99	85.901	Pundamilia_nyererei
ENSCGRG00001022610	Snrnp200	100	86.096	ENSPNAG00000010998	snrnp200	99	86.096	Pygocentrus_nattereri
ENSCGRG00001022610	Snrnp200	100	99.953	ENSRNOG00000012157	Snrnp200	100	99.953	Rattus_norvegicus
ENSCGRG00001022610	Snrnp200	100	99.766	ENSRBIG00000044690	-	100	99.766	Rhinopithecus_bieti
ENSCGRG00001022610	Snrnp200	100	99.766	ENSRROG00000037952	-	100	99.766	Rhinopithecus_roxellana
ENSCGRG00001022610	Snrnp200	100	99.719	ENSSBOG00000035471	SNRNP200	100	99.719	Saimiri_boliviensis_boliviensis
ENSCGRG00001022610	Snrnp200	97	98.742	ENSSHAG00000000758	SNRNP200	100	98.742	Sarcophilus_harrisii
ENSCGRG00001022610	Snrnp200	99	91.733	ENSSFOG00015018826	snrnp200	99	91.620	Scleropages_formosus
ENSCGRG00001022610	Snrnp200	99	90.465	ENSSMAG00000005463	snrnp200	99	90.356	Scophthalmus_maximus
ENSCGRG00001022610	Snrnp200	99	90.747	ENSSDUG00000021410	snrnp200	99	90.637	Seriola_dumerili
ENSCGRG00001022610	Snrnp200	99	90.700	ENSSLDG00000010884	snrnp200	99	90.590	Seriola_lalandi_dorsalis
ENSCGRG00001022610	Snrnp200	95	98.928	ENSSARG00000010728	SNRNP200	96	98.928	Sorex_araneus
ENSCGRG00001022610	Snrnp200	100	97.378	ENSSPUG00000003726	-	100	97.378	Sphenodon_punctatus
ENSCGRG00001022610	Snrnp200	99	90.794	ENSSPAG00000001842	snrnp200	99	90.684	Stegastes_partitus
ENSCGRG00001022610	Snrnp200	100	99.579	ENSSSCG00000008127	SNRNP200	100	99.579	Sus_scrofa
ENSCGRG00001022610	Snrnp200	99	87.914	ENSTGUG00000014475	-	100	87.914	Taeniopygia_guttata
ENSCGRG00001022610	Snrnp200	99	90.418	ENSTRUG00000001307	snrnp200	99	90.309	Takifugu_rubripes
ENSCGRG00001022610	Snrnp200	100	85.858	ENSTNIG00000004320	snrnp200	100	85.858	Tetraodon_nigroviridis
ENSCGRG00001022610	Snrnp200	82	100.000	ENSTBEG00000003329	-	67	100.000	Tupaia_belangeri
ENSCGRG00001022610	Snrnp200	100	99.391	ENSTTRG00000004983	SNRNP200	100	99.391	Tursiops_truncatus
ENSCGRG00001022610	Snrnp200	75	92.829	ENSUAMG00000008395	-	95	92.829	Ursus_americanus
ENSCGRG00001022610	Snrnp200	100	99.766	ENSUMAG00000012385	SNRNP200	100	99.766	Ursus_maritimus
ENSCGRG00001022610	Snrnp200	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSCGRG00001022610	Snrnp200	100	99.533	ENSVVUG00000026247	SNRNP200	100	99.533	Vulpes_vulpes
ENSCGRG00001022610	Snrnp200	100	94.343	ENSXETG00000001243	snrnp200	100	94.343	Xenopus_tropicalis
ENSCGRG00001022610	Snrnp200	97	90.471	ENSXMAG00000002058	snrnp200	98	90.471	Xiphophorus_maculatus