EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001022666 (Gene tree)
Gene ID: -
Gene Symbol: Prpf6
Alias: 1190003A07Rik|2610031L17Rik|ANT-1|U5-102K
Full Name: pre-mRNA-processing factor 6
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 61656 bases
Position: chrscaffold_74:1254588-1316243
Accession: 100767706
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001024891	PRP1_N	PF06424.12	1.7e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001029137	-	3087	XM_007610551	ENSCGRP00001024891	941 (aa)	XP_007608741	UPI0004542BAF

Gene Model

Click here to download ENSCGRG00001022666's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001022666's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001022666	Prpf6	100	98.193	ENSG00000101161	PRPF6	100	98.193	Homo_sapiens
ENSCGRG00001022666	Prpf6	100	93.092	ENSAPOG00000010395	prpf6	96	93.518	Acanthochromis_polyacanthus
ENSCGRG00001022666	Prpf6	100	97.558	ENSAMEG00000001916	PRPF6	99	97.558	Ailuropoda_melanoleuca
ENSCGRG00001022666	Prpf6	100	92.880	ENSACIG00000019862	prpf6	96	93.305	Amphilophus_citrinellus
ENSCGRG00001022666	Prpf6	100	93.092	ENSAOCG00000012988	prpf6	96	93.518	Amphiprion_ocellaris
ENSCGRG00001022666	Prpf6	100	86.397	ENSAPEG00000008301	prpf6	100	86.929	Amphiprion_percula
ENSCGRG00001022666	Prpf6	100	92.561	ENSATEG00000005581	prpf6	96	92.986	Anabas_testudineus
ENSCGRG00001022666	Prpf6	100	98.087	ENSACAG00000006464	PRPF6	95	98.087	Anolis_carolinensis
ENSCGRG00001022666	Prpf6	100	98.300	ENSANAG00000012661	PRPF6	100	98.940	Aotus_nancymaae
ENSCGRG00001022666	Prpf6	100	92.774	ENSACLG00000025875	prpf6	96	93.199	Astatotilapia_calliptera
ENSCGRG00001022666	Prpf6	99	93.298	ENSAMXG00000001929	prpf6	96	93.723	Astyanax_mexicanus
ENSCGRG00001022666	Prpf6	100	98.300	ENSBTAG00000011656	PRPF6	100	98.300	Bos_taurus
ENSCGRG00001022666	Prpf6	100	98.300	ENSCJAG00000010616	PRPF6	100	98.300	Callithrix_jacchus
ENSCGRG00001022666	Prpf6	100	98.831	ENSCAFG00000013165	PRPF6	100	98.831	Canis_familiaris
ENSCGRG00001022666	Prpf6	100	98.831	ENSCAFG00020002050	PRPF6	100	98.831	Canis_lupus_dingo
ENSCGRG00001022666	Prpf6	100	98.300	ENSCHIG00000018187	PRPF6	100	98.300	Capra_hircus
ENSCGRG00001022666	Prpf6	100	99.044	ENSTSYG00000007814	PRPF6	100	99.044	Carlito_syrichta
ENSCGRG00001022666	Prpf6	97	98.255	ENSCAPG00000015077	PRPF6	100	98.255	Cavia_aperea
ENSCGRG00001022666	Prpf6	100	99.575	ENSCPOG00000007518	PRPF6	100	99.575	Cavia_porcellus
ENSCGRG00001022666	Prpf6	100	95.112	ENSCCAG00000024564	PRPF6	100	95.112	Cebus_capucinus
ENSCGRG00001022666	Prpf6	100	98.087	ENSCATG00000037473	PRPF6	100	98.087	Cercocebus_atys
ENSCGRG00001022666	Prpf6	100	95.537	ENSCLAG00000003854	PRPF6	100	95.537	Chinchilla_lanigera
ENSCGRG00001022666	Prpf6	100	93.031	ENSCSAG00000016742	PRPF6	100	93.031	Chlorocebus_sabaeus
ENSCGRG00001022666	Prpf6	85	81.301	ENSCHOG00000003315	-	100	81.301	Choloepus_hoffmanni
ENSCGRG00001022666	Prpf6	100	98.193	ENSCPBG00000013964	PRPF6	96	98.193	Chrysemys_picta_bellii
ENSCGRG00001022666	Prpf6	99	73.573	ENSCING00000008817	-	99	73.573	Ciona_intestinalis
ENSCGRG00001022666	Prpf6	100	98.087	ENSCANG00000038230	PRPF6	100	98.087	Colobus_angolensis_palliatus
ENSCGRG00001022666	Prpf6	100	87.354	ENSCSEG00000018561	prpf6	100	87.779	Cynoglossus_semilaevis
ENSCGRG00001022666	Prpf6	100	92.986	ENSCVAG00000010550	prpf6	96	93.411	Cyprinodon_variegatus
ENSCGRG00001022666	Prpf6	100	92.667	ENSDARG00000091367	prpf6	99	93.092	Danio_rerio
ENSCGRG00001022666	Prpf6	100	97.556	ENSDNOG00000040544	PRPF6	100	97.556	Dasypus_novemcinctus
ENSCGRG00001022666	Prpf6	91	98.248	ENSDORG00000005406	Prpf6	100	98.248	Dipodomys_ordii
ENSCGRG00001022666	Prpf6	99	72.013	FBgn0036828	CG6841	98	72.318	Drosophila_melanogaster
ENSCGRG00001022666	Prpf6	85	95.760	ENSETEG00000004447	PRPF6	85	95.760	Echinops_telfairi
ENSCGRG00001022666	Prpf6	99	87.169	ENSEBUG00000008835	prpf6	99	87.169	Eptatretus_burgeri
ENSCGRG00001022666	Prpf6	100	98.406	ENSEASG00005023115	PRPF6	100	98.406	Equus_asinus_asinus
ENSCGRG00001022666	Prpf6	100	94.155	ENSECAG00000013983	PRPF6	100	94.155	Equus_caballus
ENSCGRG00001022666	Prpf6	90	100.000	ENSEEUG00000000180	PRPF6	82	100.000	Erinaceus_europaeus
ENSCGRG00001022666	Prpf6	100	91.605	ENSELUG00000001945	prpf6	93	91.605	Esox_lucius
ENSCGRG00001022666	Prpf6	100	98.618	ENSFCAG00000001183	PRPF6	100	98.618	Felis_catus
ENSCGRG00001022666	Prpf6	100	90.436	ENSFALG00000006046	-	97	90.436	Ficedula_albicollis
ENSCGRG00001022666	Prpf6	100	98.087	ENSFALG00000010326	-	97	98.087	Ficedula_albicollis
ENSCGRG00001022666	Prpf6	100	98.087	ENSFDAG00000006451	PRPF6	100	99.546	Fukomys_damarensis
ENSCGRG00001022666	Prpf6	100	93.730	ENSFHEG00000000560	prpf6	96	93.730	Fundulus_heteroclitus
ENSCGRG00001022666	Prpf6	100	89.535	ENSGMOG00000015622	prpf6	99	89.535	Gadus_morhua
ENSCGRG00001022666	Prpf6	100	98.087	ENSGALG00000006001	PRPF6	100	98.087	Gallus_gallus
ENSCGRG00001022666	Prpf6	100	88.417	ENSGAFG00000021109	prpf6	96	88.842	Gambusia_affinis
ENSCGRG00001022666	Prpf6	100	91.605	ENSGACG00000002576	prpf6	99	91.605	Gasterosteus_aculeatus
ENSCGRG00001022666	Prpf6	100	98.087	ENSGAGG00000008653	PRPF6	96	98.087	Gopherus_agassizii
ENSCGRG00001022666	Prpf6	100	98.193	ENSGGOG00000016876	PRPF6	100	98.193	Gorilla_gorilla
ENSCGRG00001022666	Prpf6	100	92.774	ENSHBUG00000004496	prpf6	96	93.199	Haplochromis_burtoni
ENSCGRG00001022666	Prpf6	100	99.575	ENSHGLG00000009222	PRPF6	100	99.575	Heterocephalus_glaber_female
ENSCGRG00001022666	Prpf6	97	99.564	ENSHGLG00100016600	PRPF6	100	99.564	Heterocephalus_glaber_male
ENSCGRG00001022666	Prpf6	100	91.605	ENSHCOG00000011513	prpf6	96	92.030	Hippocampus_comes
ENSCGRG00001022666	Prpf6	100	93.836	ENSIPUG00000004912	prpf6	96	93.836	Ictalurus_punctatus
ENSCGRG00001022666	Prpf6	100	96.603	ENSSTOG00000002922	PRPF6	100	96.603	Ictidomys_tridecemlineatus
ENSCGRG00001022666	Prpf6	100	99.469	ENSJJAG00000000836	Prpf6	100	99.469	Jaculus_jaculus
ENSCGRG00001022666	Prpf6	100	92.561	ENSKMAG00000017800	prpf6	96	92.986	Kryptolebias_marmoratus
ENSCGRG00001022666	Prpf6	100	92.242	ENSLBEG00000012582	prpf6	96	92.242	Labrus_bergylta
ENSCGRG00001022666	Prpf6	100	94.793	ENSLOCG00000004827	prpf6	96	93.836	Lepisosteus_oculatus
ENSCGRG00001022666	Prpf6	100	97.875	ENSLAFG00000005272	PRPF6	100	97.875	Loxodonta_africana
ENSCGRG00001022666	Prpf6	100	98.087	ENSMFAG00000037542	PRPF6	100	98.087	Macaca_fascicularis
ENSCGRG00001022666	Prpf6	100	91.507	ENSMMUG00000015558	PRPF6	98	99.653	Macaca_mulatta
ENSCGRG00001022666	Prpf6	100	83.792	ENSMNEG00000045555	PRPF6	100	83.792	Macaca_nemestrina
ENSCGRG00001022666	Prpf6	100	92.880	ENSMAMG00000010718	prpf6	96	93.305	Mastacembelus_armatus
ENSCGRG00001022666	Prpf6	100	92.251	ENSMZEG00005015261	-	99	92.675	Maylandia_zebra
ENSCGRG00001022666	Prpf6	94	92.290	ENSMZEG00005026539	prpf6	100	92.744	Maylandia_zebra
ENSCGRG00001022666	Prpf6	97	98.037	ENSMGAG00000006634	PRPF6	100	98.037	Meleagris_gallopavo
ENSCGRG00001022666	Prpf6	100	99.894	ENSMAUG00000013969	Prpf6	100	99.894	Mesocricetus_auratus
ENSCGRG00001022666	Prpf6	87	98.418	ENSMICG00000017793	PRPF6	99	98.418	Microcebus_murinus
ENSCGRG00001022666	Prpf6	100	99.787	ENSMOCG00000001701	Prpf6	100	99.787	Microtus_ochrogaster
ENSCGRG00001022666	Prpf6	100	91.923	ENSMMOG00000020419	prpf6	100	92.349	Mola_mola
ENSCGRG00001022666	Prpf6	99	98.767	ENSMODG00000017051	PRPF6	99	98.767	Monodelphis_domestica
ENSCGRG00001022666	Prpf6	99	93.018	ENSMALG00000000089	prpf6	100	93.018	Monopterus_albus
ENSCGRG00001022666	Prpf6	100	93.199	MGP_CAROLIEiJ_G0024814	Prpf6	100	100.000	Mus_caroli
ENSCGRG00001022666	Prpf6	100	99.787	ENSMUSG00000002455	Prpf6	100	100.000	Mus_musculus
ENSCGRG00001022666	Prpf6	100	99.894	MGP_PahariEiJ_G0026262	Prpf6	100	100.000	Mus_pahari
ENSCGRG00001022666	Prpf6	100	99.787	MGP_SPRETEiJ_G0025741	Prpf6	100	100.000	Mus_spretus
ENSCGRG00001022666	Prpf6	91	98.093	ENSMPUG00000008673	PRPF6	99	98.093	Mustela_putorius_furo
ENSCGRG00001022666	Prpf6	100	99.681	ENSNGAG00000003365	Prpf6	100	99.681	Nannospalax_galili
ENSCGRG00001022666	Prpf6	100	92.880	ENSNBRG00000015025	prpf6	96	93.305	Neolamprologus_brichardi
ENSCGRG00001022666	Prpf6	100	98.087	ENSNLEG00000010208	PRPF6	100	98.087	Nomascus_leucogenys
ENSCGRG00001022666	Prpf6	100	88.735	ENSMEUG00000009824	-	90	88.735	Notamacropus_eugenii
ENSCGRG00001022666	Prpf6	100	93.518	ENSODEG00000004841	PRPF6	100	93.518	Octodon_degus
ENSCGRG00001022666	Prpf6	100	92.774	ENSONIG00000017406	prpf6	96	93.199	Oreochromis_niloticus
ENSCGRG00001022666	Prpf6	100	98.406	ENSOANG00000004920	PRPF6	100	98.406	Ornithorhynchus_anatinus
ENSCGRG00001022666	Prpf6	99	97.103	ENSOCUG00000014151	PRPF6	100	97.103	Oryctolagus_cuniculus
ENSCGRG00001022666	Prpf6	100	92.561	ENSORLG00000009592	prpf6	96	92.561	Oryzias_latipes
ENSCGRG00001022666	Prpf6	100	92.667	ENSORLG00020001458	prpf6	96	92.667	Oryzias_latipes_hni
ENSCGRG00001022666	Prpf6	100	92.667	ENSORLG00015018762	prpf6	96	92.667	Oryzias_latipes_hsok
ENSCGRG00001022666	Prpf6	100	92.561	ENSOMEG00000012174	prpf6	96	92.986	Oryzias_melastigma
ENSCGRG00001022666	Prpf6	100	91.507	ENSOGAG00000007573	PRPF6	100	91.507	Otolemur_garnettii
ENSCGRG00001022666	Prpf6	100	97.875	ENSOARG00000008776	PRPF6	99	97.875	Ovis_aries
ENSCGRG00001022666	Prpf6	100	98.193	ENSPPAG00000008686	PRPF6	100	98.193	Pan_paniscus
ENSCGRG00001022666	Prpf6	100	98.618	ENSPPRG00000008497	PRPF6	100	98.618	Panthera_pardus
ENSCGRG00001022666	Prpf6	97	98.582	ENSPTIG00000011184	PRPF6	97	98.582	Panthera_tigris_altaica
ENSCGRG00001022666	Prpf6	100	98.193	ENSPTRG00000013765	PRPF6	100	98.193	Pan_troglodytes
ENSCGRG00001022666	Prpf6	100	97.556	ENSPANG00000024135	PRPF6	100	97.556	Papio_anubis
ENSCGRG00001022666	Prpf6	100	94.368	ENSPKIG00000005627	prpf6	99	94.793	Paramormyrops_kingsleyae
ENSCGRG00001022666	Prpf6	94	98.299	ENSPSIG00000007717	PRPF6	100	98.299	Pelodiscus_sinensis
ENSCGRG00001022666	Prpf6	100	90.340	ENSPMGG00000008925	prpf6	96	90.552	Periophthalmus_magnuspinnatus
ENSCGRG00001022666	Prpf6	100	99.787	ENSPEMG00000016036	Prpf6	100	99.787	Peromyscus_maniculatus_bairdii
ENSCGRG00001022666	Prpf6	99	88.523	ENSPMAG00000006144	prpf6	99	88.523	Petromyzon_marinus
ENSCGRG00001022666	Prpf6	100	98.512	ENSPCIG00000017909	PRPF6	100	98.512	Phascolarctos_cinereus
ENSCGRG00001022666	Prpf6	100	93.305	ENSPFOG00000006431	prpf6	96	93.730	Poecilia_formosa
ENSCGRG00001022666	Prpf6	100	93.199	ENSPLAG00000005974	prpf6	96	93.624	Poecilia_latipinna
ENSCGRG00001022666	Prpf6	100	93.411	ENSPMEG00000009977	prpf6	96	93.836	Poecilia_mexicana
ENSCGRG00001022666	Prpf6	100	93.305	ENSPREG00000017993	prpf6	92	93.730	Poecilia_reticulata
ENSCGRG00001022666	Prpf6	100	97.662	ENSPPYG00000011256	PRPF6	100	97.662	Pongo_abelii
ENSCGRG00001022666	Prpf6	95	99.673	ENSPCAG00000006536	PRPF6	88	99.673	Procavia_capensis
ENSCGRG00001022666	Prpf6	100	98.406	ENSPCOG00000016881	PRPF6	100	98.406	Propithecus_coquereli
ENSCGRG00001022666	Prpf6	100	92.561	ENSPVAG00000014316	PRPF6	100	92.561	Pteropus_vampyrus
ENSCGRG00001022666	Prpf6	100	76.327	ENSPNYG00000001939	prpf6	96	81.615	Pundamilia_nyererei
ENSCGRG00001022666	Prpf6	100	93.518	ENSPNAG00000015606	prpf6	96	93.943	Pygocentrus_nattereri
ENSCGRG00001022666	Prpf6	100	99.787	ENSRNOG00000051498	Prpf6	100	99.787	Rattus_norvegicus
ENSCGRG00001022666	Prpf6	100	98.087	ENSRBIG00000043613	PRPF6	100	98.087	Rhinopithecus_bieti
ENSCGRG00001022666	Prpf6	100	94.921	ENSRROG00000040969	PRPF6	98	98.270	Rhinopithecus_roxellana
ENSCGRG00001022666	Prpf6	91	93.772	ENSSBOG00000020632	PRPF6	93	93.772	Saimiri_boliviensis_boliviensis
ENSCGRG00001022666	Prpf6	100	98.512	ENSSHAG00000016810	PRPF6	100	98.512	Sarcophilus_harrisii
ENSCGRG00001022666	Prpf6	99	94.629	ENSSFOG00015020859	prpf6	100	95.059	Scleropages_formosus
ENSCGRG00001022666	Prpf6	100	92.136	ENSSMAG00000008112	prpf6	96	92.136	Scophthalmus_maximus
ENSCGRG00001022666	Prpf6	100	92.774	ENSSDUG00000016142	prpf6	96	93.199	Seriola_dumerili
ENSCGRG00001022666	Prpf6	100	92.774	ENSSLDG00000025283	prpf6	100	89.692	Seriola_lalandi_dorsalis
ENSCGRG00001022666	Prpf6	94	96.825	ENSSPUG00000018260	PRPF6	100	96.825	Sphenodon_punctatus
ENSCGRG00001022666	Prpf6	100	92.774	ENSSPAG00000015850	prpf6	96	93.199	Stegastes_partitus
ENSCGRG00001022666	Prpf6	100	98.300	ENSSSCG00000029119	PRPF6	100	98.186	Sus_scrofa
ENSCGRG00001022666	Prpf6	100	98.193	ENSTGUG00000007221	PRPF6	99	98.193	Taeniopygia_guttata
ENSCGRG00001022666	Prpf6	100	91.711	ENSTRUG00000002920	prpf6	96	92.136	Takifugu_rubripes
ENSCGRG00001022666	Prpf6	100	85.412	ENSTNIG00000017873	prpf6	100	85.835	Tetraodon_nigroviridis
ENSCGRG00001022666	Prpf6	89	98.895	ENSTBEG00000005348	PRPF6	85	98.895	Tupaia_belangeri
ENSCGRG00001022666	Prpf6	100	97.768	ENSTTRG00000013068	PRPF6	100	97.768	Tursiops_truncatus
ENSCGRG00001022666	Prpf6	98	97.065	ENSUMAG00000021631	PRPF6	98	97.065	Ursus_maritimus
ENSCGRG00001022666	Prpf6	100	98.831	ENSVVUG00000014948	PRPF6	100	98.831	Vulpes_vulpes
ENSCGRG00001022666	Prpf6	100	96.493	ENSXETG00000012054	prpf6	97	96.493	Xenopus_tropicalis
ENSCGRG00001022666	Prpf6	100	93.411	ENSXCOG00000008082	prpf6	96	93.836	Xiphophorus_couchianus
ENSCGRG00001022666	Prpf6	100	93.411	ENSXMAG00000015581	prpf6	96	93.836	Xiphophorus_maculatus