EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001022673 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 703 bases
Position: chrscaffold_9:25552359-25553061
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001024894	LSM	PF01423.22	3.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001029140	-	372	-	ENSCGRP00001024894	123 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001022673's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001022673's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001022673	-	54	32.353	ENSCGRG00001013932	Lsm2	72	32.353
ENSCGRG00001022673	-	95	88.983	ENSCGRG00001004317	-	95	88.983

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001022673	-	93	81.034	ENSG00000181817	LSM10	93	81.034	Homo_sapiens
ENSCGRG00001022673	-	94	82.051	ENSAMEG00000019854	LSM10	93	82.051	Ailuropoda_melanoleuca
ENSCGRG00001022673	-	93	62.069	ENSACIG00000015420	oscp1a	75	62.069	Amphilophus_citrinellus
ENSCGRG00001022673	-	93	62.931	ENSAOCG00000014654	-	94	62.931	Amphiprion_ocellaris
ENSCGRG00001022673	-	88	61.468	ENSAOCG00000015607	LSM10	83	61.468	Amphiprion_ocellaris
ENSCGRG00001022673	-	93	62.931	ENSAOCG00000015618	LSM10	94	62.931	Amphiprion_ocellaris
ENSCGRG00001022673	-	88	61.468	ENSAPEG00000021851	LSM10	83	61.468	Amphiprion_percula
ENSCGRG00001022673	-	93	62.931	ENSAPEG00000021845	-	94	62.931	Amphiprion_percula
ENSCGRG00001022673	-	90	57.143	ENSATEG00000006310	oscp1a	81	57.143	Anabas_testudineus
ENSCGRG00001022673	-	94	58.974	ENSACAG00000001231	LSM10	93	58.974	Anolis_carolinensis
ENSCGRG00001022673	-	93	81.897	ENSANAG00000031489	-	93	81.897	Aotus_nancymaae
ENSCGRG00001022673	-	93	81.897	ENSANAG00000018759	-	93	81.897	Aotus_nancymaae
ENSCGRG00001022673	-	88	62.963	ENSACLG00000004728	oscp1a	86	62.963	Astatotilapia_calliptera
ENSCGRG00001022673	-	96	61.345	ENSAMXG00000025301	oscp1a	97	61.345	Astyanax_mexicanus
ENSCGRG00001022673	-	93	81.034	ENSBTAG00000024096	LSM10	93	81.034	Bos_taurus
ENSCGRG00001022673	-	93	82.759	ENSCJAG00000044880	LSM10	93	82.759	Callithrix_jacchus
ENSCGRG00001022673	-	94	85.470	ENSCAFG00000003382	LSM10	93	85.470	Canis_familiaris
ENSCGRG00001022673	-	94	85.470	ENSCAFG00020008920	LSM10	93	85.470	Canis_lupus_dingo
ENSCGRG00001022673	-	93	81.034	ENSCHIG00000009398	LSM10	93	81.034	Capra_hircus
ENSCGRG00001022673	-	94	81.197	ENSCAPG00000012567	LSM10	93	81.197	Cavia_aperea
ENSCGRG00001022673	-	94	81.197	ENSCPOG00000039302	LSM10	93	81.197	Cavia_porcellus
ENSCGRG00001022673	-	93	80.172	ENSCCAG00000008378	-	93	80.172	Cebus_capucinus
ENSCGRG00001022673	-	93	81.897	ENSCCAG00000018913	-	93	81.897	Cebus_capucinus
ENSCGRG00001022673	-	93	81.897	ENSCATG00000006589	LSM10	93	81.897	Cercocebus_atys
ENSCGRG00001022673	-	94	82.906	ENSCLAG00000008633	LSM10	93	82.906	Chinchilla_lanigera
ENSCGRG00001022673	-	93	81.897	ENSCSAG00000000134	LSM10	93	81.897	Chlorocebus_sabaeus
ENSCGRG00001022673	-	94	80.672	ENSCHOG00000008615	LSM10	94	80.672	Choloepus_hoffmanni
ENSCGRG00001022673	-	70	30.233	ENSCING00000024984	-	73	30.233	Ciona_intestinalis
ENSCGRG00001022673	-	75	32.609	ENSCSAVG00000001896	-	77	32.609	Ciona_savignyi
ENSCGRG00001022673	-	93	81.897	ENSCANG00000019928	LSM10	93	81.897	Colobus_angolensis_palliatus
ENSCGRG00001022673	-	95	88.983	ENSCGRG00000014935	-	95	88.983	Cricetulus_griseus_crigri
ENSCGRG00001022673	-	100	100.000	ENSCGRG00000015514	-	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001022673	-	93	58.621	ENSCSEG00000010374	oscp1a	77	58.621	Cynoglossus_semilaevis
ENSCGRG00001022673	-	88	62.037	ENSCVAG00000001536	oscp1a	80	62.037	Cyprinodon_variegatus
ENSCGRG00001022673	-	65	61.728	ENSDARG00000109563	CABZ01074453.1	92	61.728	Danio_rerio
ENSCGRG00001022673	-	94	64.957	ENSDARG00000101222	oscp1a	95	64.957	Danio_rerio
ENSCGRG00001022673	-	93	84.483	ENSDNOG00000036662	LSM10	93	84.483	Dasypus_novemcinctus
ENSCGRG00001022673	-	89	89.091	ENSDORG00000007579	Lsm10	88	89.091	Dipodomys_ordii
ENSCGRG00001022673	-	80	31.313	FBgn0033554	Lsm10	70	31.313	Drosophila_melanogaster
ENSCGRG00001022673	-	94	81.197	ENSETEG00000005703	LSM10	93	81.197	Echinops_telfairi
ENSCGRG00001022673	-	85	50.476	ENSEBUG00000001312	oscp1a	84	50.476	Eptatretus_burgeri
ENSCGRG00001022673	-	94	85.470	ENSEASG00005012194	LSM10	93	85.470	Equus_asinus_asinus
ENSCGRG00001022673	-	94	86.325	ENSECAG00000005071	LSM10	93	86.325	Equus_caballus
ENSCGRG00001022673	-	94	83.761	ENSEEUG00000012032	LSM10	93	83.761	Erinaceus_europaeus
ENSCGRG00001022673	-	94	61.538	ENSELUG00000007452	oscp1a	94	61.538	Esox_lucius
ENSCGRG00001022673	-	94	62.393	ENSFALG00000000851	LSM10	93	62.393	Ficedula_albicollis
ENSCGRG00001022673	-	94	79.487	ENSFDAG00000021056	LSM10	93	79.487	Fukomys_damarensis
ENSCGRG00001022673	-	86	63.551	ENSFHEG00000001058	oscp1a	91	63.551	Fundulus_heteroclitus
ENSCGRG00001022673	-	80	62.626	ENSGMOG00000019832	oscp1a	82	62.626	Gadus_morhua
ENSCGRG00001022673	-	94	65.812	ENSGALG00000002127	LSM10	93	65.812	Gallus_gallus
ENSCGRG00001022673	-	91	57.143	ENSGAFG00000016445	oscp1a	89	57.143	Gambusia_affinis
ENSCGRG00001022673	-	93	59.483	ENSGACG00000002329	oscp1a	93	59.483	Gasterosteus_aculeatus
ENSCGRG00001022673	-	94	64.957	ENSGAGG00000024848	LSM10	93	64.957	Gopherus_agassizii
ENSCGRG00001022673	-	93	82.759	ENSGGOG00000003556	LSM10	93	82.759	Gorilla_gorilla
ENSCGRG00001022673	-	88	62.963	ENSHBUG00000001722	oscp1a	86	62.963	Haplochromis_burtoni
ENSCGRG00001022673	-	94	80.342	ENSHGLG00000011625	LSM10	93	80.342	Heterocephalus_glaber_female
ENSCGRG00001022673	-	94	80.342	ENSHGLG00100001769	LSM10	93	80.342	Heterocephalus_glaber_male
ENSCGRG00001022673	-	78	65.625	ENSIPUG00000005808	oscp1a	82	65.625	Ictalurus_punctatus
ENSCGRG00001022673	-	94	83.761	ENSSTOG00000000606	LSM10	93	83.761	Ictidomys_tridecemlineatus
ENSCGRG00001022673	-	93	58.621	ENSKMAG00000012143	oscp1a	94	58.621	Kryptolebias_marmoratus
ENSCGRG00001022673	-	88	62.037	ENSLBEG00000017764	oscp1a	87	62.037	Labrus_bergylta
ENSCGRG00001022673	-	89	69.725	ENSLACG00000015904	LSM10	82	69.725	Latimeria_chalumnae
ENSCGRG00001022673	-	93	62.931	ENSLOCG00000018277	oscp1a	93	62.931	Lepisosteus_oculatus
ENSCGRG00001022673	-	93	84.483	ENSLAFG00000009600	LSM10	93	84.483	Loxodonta_africana
ENSCGRG00001022673	-	93	81.897	ENSMFAG00000009115	LSM10	93	81.897	Macaca_fascicularis
ENSCGRG00001022673	-	93	81.897	ENSMMUG00000017338	LSM10	93	81.897	Macaca_mulatta
ENSCGRG00001022673	-	93	81.897	ENSMNEG00000020023	LSM10	93	81.897	Macaca_nemestrina
ENSCGRG00001022673	-	93	81.897	ENSMLEG00000025150	LSM10	93	81.897	Mandrillus_leucophaeus
ENSCGRG00001022673	-	93	59.483	ENSMAMG00000004427	oscp1a	93	59.483	Mastacembelus_armatus
ENSCGRG00001022673	-	88	62.963	ENSMZEG00005026307	oscp1a	86	62.963	Maylandia_zebra
ENSCGRG00001022673	-	94	64.957	ENSMGAG00000015707	LSM10	93	64.957	Meleagris_gallopavo
ENSCGRG00001022673	-	95	86.441	ENSMAUG00000016624	Lsm10	95	86.441	Mesocricetus_auratus
ENSCGRG00001022673	-	94	87.179	ENSMOCG00000021943	Lsm10	94	87.179	Microtus_ochrogaster
ENSCGRG00001022673	-	90	60.714	ENSMMOG00000013597	oscp1a	82	60.714	Mola_mola
ENSCGRG00001022673	-	94	75.214	ENSMODG00000023328	LSM10	93	75.214	Monodelphis_domestica
ENSCGRG00001022673	-	55	50.000	ENSMALG00000012661	oscp1a	57	50.000	Monopterus_albus
ENSCGRG00001022673	-	94	84.615	MGP_CAROLIEiJ_G0026467	Lsm10	94	84.615	Mus_caroli
ENSCGRG00001022673	-	94	85.470	ENSMUSG00000050188	Lsm10	94	85.470	Mus_musculus
ENSCGRG00001022673	-	94	85.470	MGP_PahariEiJ_G0028798	Lsm10	94	85.470	Mus_pahari
ENSCGRG00001022673	-	94	85.470	MGP_SPRETEiJ_G0027446	Lsm10	94	85.470	Mus_spretus
ENSCGRG00001022673	-	94	85.470	ENSMPUG00000018593	LSM10	93	85.470	Mustela_putorius_furo
ENSCGRG00001022673	-	89	85.321	ENSMLUG00000023895	LSM10	87	85.321	Myotis_lucifugus
ENSCGRG00001022673	-	94	84.615	ENSNGAG00000015011	Lsm10	93	84.615	Nannospalax_galili
ENSCGRG00001022673	-	88	63.889	ENSNBRG00000014306	oscp1a	86	63.889	Neolamprologus_brichardi
ENSCGRG00001022673	-	93	82.759	ENSNLEG00000033754	LSM10	93	82.759	Nomascus_leucogenys
ENSCGRG00001022673	-	94	75.214	ENSMEUG00000006313	LSM10	93	75.214	Notamacropus_eugenii
ENSCGRG00001022673	-	94	79.487	ENSOPRG00000001699	LSM10	93	79.487	Ochotona_princeps
ENSCGRG00001022673	-	94	82.906	ENSODEG00000019161	LSM10	93	82.906	Octodon_degus
ENSCGRG00001022673	-	88	63.889	ENSONIG00000020904	oscp1a	87	63.889	Oreochromis_niloticus
ENSCGRG00001022673	-	94	69.231	ENSOANG00000002066	LSM10	93	69.231	Ornithorhynchus_anatinus
ENSCGRG00001022673	-	94	78.632	ENSOCUG00000005333	LSM10	93	78.632	Oryctolagus_cuniculus
ENSCGRG00001022673	-	94	61.538	ENSORLG00000009504	oscp1a	95	61.538	Oryzias_latipes
ENSCGRG00001022673	-	94	61.538	ENSORLG00020016201	oscp1a	95	61.538	Oryzias_latipes_hni
ENSCGRG00001022673	-	94	61.538	ENSORLG00015007794	oscp1a	95	61.538	Oryzias_latipes_hsok
ENSCGRG00001022673	-	94	82.906	ENSOGAG00000002653	LSM10	93	82.906	Otolemur_garnettii
ENSCGRG00001022673	-	93	81.034	ENSOARG00000009596	LSM10	93	81.034	Ovis_aries
ENSCGRG00001022673	-	93	81.034	ENSPPAG00000023465	LSM10	93	81.034	Pan_paniscus
ENSCGRG00001022673	-	94	85.470	ENSPPRG00000014619	LSM10	93	85.470	Panthera_pardus
ENSCGRG00001022673	-	94	85.470	ENSPTIG00000004613	LSM10	93	85.470	Panthera_tigris_altaica
ENSCGRG00001022673	-	93	81.034	ENSPTRG00000000539	LSM10	93	81.034	Pan_troglodytes
ENSCGRG00001022673	-	93	81.897	ENSPANG00000023172	LSM10	93	81.897	Papio_anubis
ENSCGRG00001022673	-	93	59.483	ENSPKIG00000003728	oscp1a	92	59.483	Paramormyrops_kingsleyae
ENSCGRG00001022673	-	94	65.812	ENSPSIG00000000590	LSM10	93	65.812	Pelodiscus_sinensis
ENSCGRG00001022673	-	59	59.459	ENSPMGG00000015718	oscp1a	94	59.459	Periophthalmus_magnuspinnatus
ENSCGRG00001022673	-	80	74.747	ENSPCIG00000014865	LSM10	71	74.747	Phascolarctos_cinereus
ENSCGRG00001022673	-	91	61.062	ENSPFOG00000020490	oscp1a	94	61.062	Poecilia_formosa
ENSCGRG00001022673	-	91	61.062	ENSPLAG00000016537	oscp1a	85	61.062	Poecilia_latipinna
ENSCGRG00001022673	-	85	63.810	ENSPMEG00000000174	oscp1a	90	63.810	Poecilia_mexicana
ENSCGRG00001022673	-	91	61.062	ENSPREG00000009899	oscp1a	85	61.062	Poecilia_reticulata
ENSCGRG00001022673	-	93	81.897	ENSPPYG00000001539	LSM10	93	81.897	Pongo_abelii
ENSCGRG00001022673	-	92	82.456	ENSPCAG00000002520	LSM10	92	82.456	Procavia_capensis
ENSCGRG00001022673	-	89	86.239	ENSPVAG00000008644	LSM10	87	86.239	Pteropus_vampyrus
ENSCGRG00001022673	-	88	62.963	ENSPNYG00000003138	oscp1a	86	62.963	Pundamilia_nyererei
ENSCGRG00001022673	-	94	60.684	ENSPNAG00000028829	oscp1a	95	60.684	Pygocentrus_nattereri
ENSCGRG00001022673	-	94	86.325	ENSRNOG00000025716	Lsm10	94	86.325	Rattus_norvegicus
ENSCGRG00001022673	-	93	81.897	ENSRBIG00000001561	LSM10	93	81.897	Rhinopithecus_bieti
ENSCGRG00001022673	-	93	81.897	ENSRROG00000011414	LSM10	93	81.897	Rhinopithecus_roxellana
ENSCGRG00001022673	-	93	81.897	ENSSBOG00000036413	-	93	81.897	Saimiri_boliviensis_boliviensis
ENSCGRG00001022673	-	94	74.359	ENSSHAG00000018056	LSM10	93	74.359	Sarcophilus_harrisii
ENSCGRG00001022673	-	77	63.158	ENSSFOG00015019954	lsm10	94	60.684	Scleropages_formosus
ENSCGRG00001022673	-	93	59.483	ENSSMAG00000001297	oscp1a	97	59.483	Scophthalmus_maximus
ENSCGRG00001022673	-	88	60.185	ENSSDUG00000007090	oscp1a	86	60.185	Seriola_dumerili
ENSCGRG00001022673	-	88	61.111	ENSSLDG00000000800	oscp1a	88	61.111	Seriola_lalandi_dorsalis
ENSCGRG00001022673	-	94	80.672	ENSSARG00000004211	LSM10	94	82.353	Sorex_araneus
ENSCGRG00001022673	-	93	59.483	ENSSPAG00000009229	oscp1a	94	59.483	Stegastes_partitus
ENSCGRG00001022673	-	93	81.034	ENSSSCG00000038916	LSM10	93	81.034	Sus_scrofa
ENSCGRG00001022673	-	94	64.103	ENSTGUG00000001602	-	94	64.103	Taeniopygia_guttata
ENSCGRG00001022673	-	94	64.103	ENSTGUG00000001600	-	94	64.103	Taeniopygia_guttata
ENSCGRG00001022673	-	89	65.138	ENSTRUG00000010531	oscp1a	86	65.138	Takifugu_rubripes
ENSCGRG00001022673	-	93	83.621	ENSTBEG00000016674	LSM10	93	83.621	Tupaia_belangeri
ENSCGRG00001022673	-	94	82.906	ENSUAMG00000020265	LSM10	93	82.906	Ursus_americanus
ENSCGRG00001022673	-	94	82.906	ENSUMAG00000001438	LSM10	53	82.906	Ursus_maritimus
ENSCGRG00001022673	-	94	85.470	ENSVVUG00000023209	LSM10	93	85.470	Vulpes_vulpes
ENSCGRG00001022673	-	94	59.829	ENSXETG00000027631	lsm10	93	59.829	Xenopus_tropicalis
ENSCGRG00001022673	-	93	57.759	ENSXCOG00000018776	oscp1a	72	57.759	Xiphophorus_couchianus
ENSCGRG00001022673	-	92	57.500	ENSXMAG00000019963	oscp1a	94	57.500	Xiphophorus_maculatus