EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001022693 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 46122 bases
Position: chrscaffold_43:4736335-4782456
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001024962	PAP_RNA-bind	PF04926.15	5.3e-25	1	1
ENSCGRP00001024974	PAP_RNA-bind	PF04926.15	5.3e-25	1	1
ENSCGRP00001024965	PAP_RNA-bind	PF04926.15	5.4e-25	1	1
ENSCGRP00001024969	PAP_RNA-bind	PF04926.15	5.6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001029211	-	2157	-	ENSCGRP00001024965	718 (aa)	-	-
ENSCGRT00001029208	-	2220	-	ENSCGRP00001024962	739 (aa)	-	-
ENSCGRT00001029220	-	2226	-	ENSCGRP00001024974	741 (aa)	-	-
ENSCGRT00001029215	-	2082	-	ENSCGRP00001024969	693 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001022693's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001022693's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001022693	-	99	87.263	ENSCGRG00001002732	-	99	87.263
ENSCGRG00001022693	-	100	91.340	ENSCGRG00001000229	-	100	91.340
ENSCGRG00001022693	-	98	60.268	ENSCGRG00001014951	Papolg	99	60.680

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001022693	-	100	95.718	ENSG00000090060	PAPOLA	98	98.925	Homo_sapiens
ENSCGRG00001022693	-	99	96.070	ENSAMEG00000014142	PAPOLA	100	95.816	Ailuropoda_melanoleuca
ENSCGRG00001022693	-	99	90.786	ENSAPLG00000006645	PAPOLA	100	90.553	Anas_platyrhynchos
ENSCGRG00001022693	-	99	92.402	ENSACAG00000013474	PAPOLA	99	95.599	Anolis_carolinensis
ENSCGRG00001022693	-	77	90.824	ENSANAG00000027941	-	98	90.824	Aotus_nancymaae
ENSCGRG00001022693	-	99	96.816	ENSANAG00000018274	PAPOLA	99	98.529	Aotus_nancymaae
ENSCGRG00001022693	-	100	73.314	ENSAMXG00000018141	papola	99	85.225	Astyanax_mexicanus
ENSCGRG00001022693	-	100	97.547	ENSBTAG00000004054	PAPOLA	100	97.547	Bos_taurus
ENSCGRG00001022693	-	100	96.567	ENSCJAG00000006512	PAPOLA	99	98.532	Callithrix_jacchus
ENSCGRG00001022693	-	100	95.705	ENSCAFG00000017783	PAPOLA	100	95.705	Canis_familiaris
ENSCGRG00001022693	-	100	96.240	ENSCAFG00020011550	PAPOLA	100	96.240	Canis_lupus_dingo
ENSCGRG00001022693	-	100	95.940	ENSCHIG00000025004	-	100	95.940	Capra_hircus
ENSCGRG00001022693	-	99	96.667	ENSTSYG00000012384	PAPOLA	99	96.667	Carlito_syrichta
ENSCGRG00001022693	-	100	93.362	ENSCPOG00000002648	PAPOLA	100	93.362	Cavia_porcellus
ENSCGRG00001022693	-	100	95.580	ENSCCAG00000025120	PAPOLA	98	97.967	Cebus_capucinus
ENSCGRG00001022693	-	100	95.718	ENSCATG00000018815	PAPOLA	99	98.883	Cercocebus_atys
ENSCGRG00001022693	-	100	97.258	ENSCLAG00000016342	PAPOLA	100	97.258	Chinchilla_lanigera
ENSCGRG00001022693	-	100	95.570	ENSCSAG00000010516	PAPOLA	100	95.570	Chlorocebus_sabaeus
ENSCGRG00001022693	-	72	81.471	ENSCHOG00000001115	PAPOLA	72	81.471	Choloepus_hoffmanni
ENSCGRG00001022693	-	100	92.703	ENSCPBG00000024125	PAPOLA	100	92.703	Chrysemys_picta_bellii
ENSCGRG00001022693	-	99	90.310	ENSCANG00000000159	PAPOLA	100	90.310	Colobus_angolensis_palliatus
ENSCGRG00001022693	-	100	100.000	ENSCGRG00000003664	-	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001022693	-	98	84.435	ENSCGRG00000001888	-	96	84.022	Cricetulus_griseus_crigri
ENSCGRG00001022693	-	100	86.402	ENSCGRG00000000257	-	100	86.402	Cricetulus_griseus_crigri
ENSCGRG00001022693	-	91	45.781	ENSCSEG00000001841	-	74	52.883	Cynoglossus_semilaevis
ENSCGRG00001022693	-	100	70.937	ENSDARG00000009585	papola	100	70.937	Danio_rerio
ENSCGRG00001022693	-	65	88.983	ENSDORG00000013415	-	100	90.254	Dipodomys_ordii
ENSCGRG00001022693	-	99	82.768	ENSETEG00000004889	PAPOLA	100	82.768	Echinops_telfairi
ENSCGRG00001022693	-	100	69.048	ENSELUG00000018972	papola	100	68.966	Esox_lucius
ENSCGRG00001022693	-	100	97.835	ENSFCAG00000006784	PAPOLA	100	97.835	Felis_catus
ENSCGRG00001022693	-	99	93.750	ENSFALG00000002547	PAPOLA	98	88.026	Ficedula_albicollis
ENSCGRG00001022693	-	99	95.942	ENSFDAG00000010370	PAPOLA	100	95.942	Fukomys_damarensis
ENSCGRG00001022693	-	73	66.910	ENSGMOG00000010209	papola	100	67.276	Gadus_morhua
ENSCGRG00001022693	-	100	90.257	ENSGALG00000033099	PAPOLA	100	90.257	Gallus_gallus
ENSCGRG00001022693	-	69	54.167	ENSGACG00000006142	-	100	53.750	Gasterosteus_aculeatus
ENSCGRG00001022693	-	96	94.864	ENSGAGG00000020500	PAPOLA	99	94.864	Gopherus_agassizii
ENSCGRG00001022693	-	100	95.718	ENSGGOG00000006287	PAPOLA	100	95.718	Gorilla_gorilla
ENSCGRG00001022693	-	100	77.943	ENSHGLG00000007467	-	100	77.673	Heterocephalus_glaber_female
ENSCGRG00001022693	-	100	96.681	ENSHGLG00000007909	-	100	96.681	Heterocephalus_glaber_female
ENSCGRG00001022693	-	99	83.651	ENSHGLG00000017457	-	100	82.970	Heterocephalus_glaber_female
ENSCGRG00001022693	-	100	96.537	ENSHGLG00100017273	PAPOLA	100	96.537	Heterocephalus_glaber_male
ENSCGRG00001022693	-	100	68.655	ENSIPUG00000005919	papola	100	68.274	Ictalurus_punctatus
ENSCGRG00001022693	-	100	97.547	ENSSTOG00000011471	PAPOLA	100	97.547	Ictidomys_tridecemlineatus
ENSCGRG00001022693	-	99	96.812	ENSJJAG00000024340	Papola	100	96.812	Jaculus_jaculus
ENSCGRG00001022693	-	99	76.923	ENSLACG00000018136	PAPOLA	100	76.747	Latimeria_chalumnae
ENSCGRG00001022693	-	99	65.912	ENSLOCG00000008632	papola	99	66.045	Lepisosteus_oculatus
ENSCGRG00001022693	-	99	95.380	ENSLAFG00000000946	PAPOLA	99	95.380	Loxodonta_africana
ENSCGRG00001022693	-	100	95.718	ENSMFAG00000001792	PAPOLA	99	98.706	Macaca_fascicularis
ENSCGRG00001022693	-	100	95.570	ENSMMUG00000018610	PAPOLA	100	96.557	Macaca_mulatta
ENSCGRG00001022693	-	100	95.718	ENSMNEG00000043747	PAPOLA	100	97.431	Macaca_nemestrina
ENSCGRG00001022693	-	100	95.718	ENSMLEG00000032066	PAPOLA	100	95.718	Mandrillus_leucophaeus
ENSCGRG00001022693	-	84	89.533	ENSMGAG00000013228	-	100	89.533	Meleagris_gallopavo
ENSCGRG00001022693	-	100	99.567	ENSMAUG00000017178	Papola	100	99.567	Mesocricetus_auratus
ENSCGRG00001022693	-	100	97.695	ENSMICG00000010347	PAPOLA	100	97.695	Microcebus_murinus
ENSCGRG00001022693	-	100	99.423	ENSMOCG00000021670	Papola	100	99.423	Microtus_ochrogaster
ENSCGRG00001022693	-	100	95.399	ENSMODG00000012887	-	100	95.399	Monodelphis_domestica
ENSCGRG00001022693	-	99	81.389	ENSMODG00000001969	-	99	81.528	Monodelphis_domestica
ENSCGRG00001022693	-	100	98.413	MGP_CAROLIEiJ_G0018093	Papola	100	98.413	Mus_caroli
ENSCGRG00001022693	-	100	98.701	ENSMUSG00000021111	Papola	100	98.701	Mus_musculus
ENSCGRG00001022693	-	100	98.701	MGP_PahariEiJ_G0029850	Papola	100	98.701	Mus_pahari
ENSCGRG00001022693	-	100	98.846	MGP_SPRETEiJ_G0018943	Papola	100	98.846	Mus_spretus
ENSCGRG00001022693	-	100	96.888	ENSMPUG00000003054	PAPOLA	100	96.888	Mustela_putorius_furo
ENSCGRG00001022693	-	100	94.452	ENSMLUG00000010922	PAPOLA	100	94.452	Myotis_lucifugus
ENSCGRG00001022693	-	100	97.403	ENSNGAG00000022172	Papola	100	97.403	Nannospalax_galili
ENSCGRG00001022693	-	99	91.076	ENSNLEG00000000625	PAPOLA	100	91.076	Nomascus_leucogenys
ENSCGRG00001022693	-	66	86.260	ENSMEUG00000007831	-	74	85.827	Notamacropus_eugenii
ENSCGRG00001022693	-	97	90.846	ENSOPRG00000007625	PAPOLA	100	90.846	Ochotona_princeps
ENSCGRG00001022693	-	68	54.219	ENSONIG00000001062	-	96	54.219	Oreochromis_niloticus
ENSCGRG00001022693	-	99	96.527	ENSOANG00000013812	PAPOLA	99	96.527	Ornithorhynchus_anatinus
ENSCGRG00001022693	-	99	93.351	ENSOCUG00000011531	PAPOLA	99	93.351	Oryctolagus_cuniculus
ENSCGRG00001022693	-	100	96.486	ENSOGAG00000004611	PAPOLA	100	96.486	Otolemur_garnettii
ENSCGRG00001022693	-	100	96.482	ENSOARG00000016579	-	100	96.482	Ovis_aries
ENSCGRG00001022693	-	100	95.718	ENSPPAG00000030505	PAPOLA	100	95.718	Pan_paniscus
ENSCGRG00001022693	-	100	96.797	ENSPPRG00000008616	PAPOLA	100	96.797	Panthera_pardus
ENSCGRG00001022693	-	99	96.783	ENSPTIG00000018852	PAPOLA	99	96.783	Panthera_tigris_altaica
ENSCGRG00001022693	-	100	95.718	ENSPTRG00000006704	PAPOLA	100	95.718	Pan_troglodytes
ENSCGRG00001022693	-	100	95.718	ENSPANG00000025582	PAPOLA	98	98.883	Papio_anubis
ENSCGRG00001022693	-	96	74.359	ENSPKIG00000014471	papola	100	70.884	Paramormyrops_kingsleyae
ENSCGRG00001022693	-	100	93.243	ENSPSIG00000014157	PAPOLA	87	93.243	Pelodiscus_sinensis
ENSCGRG00001022693	-	100	99.323	ENSPEMG00000000043	Papola	100	99.323	Peromyscus_maniculatus_bairdii
ENSCGRG00001022693	-	100	95.135	ENSPCIG00000013234	PAPOLA	100	95.924	Phascolarctos_cinereus
ENSCGRG00001022693	-	100	93.154	ENSPPYG00000006128	PAPOLA	100	93.154	Pongo_abelii
ENSCGRG00001022693	-	89	90.701	ENSPCAG00000004199	PAPOLA	100	90.701	Procavia_capensis
ENSCGRG00001022693	-	99	93.632	ENSPCOG00000022117	PAPOLA	99	93.632	Propithecus_coquereli
ENSCGRG00001022693	-	100	95.264	ENSPVAG00000013925	PAPOLA	100	95.264	Pteropus_vampyrus
ENSCGRG00001022693	-	100	72.496	ENSPNAG00000010467	papola	100	72.521	Pygocentrus_nattereri
ENSCGRG00001022693	-	100	97.970	ENSRNOG00000004827	Papola	100	97.970	Rattus_norvegicus
ENSCGRG00001022693	-	99	96.126	ENSRBIG00000038490	PAPOLA	100	96.126	Rhinopithecus_bieti
ENSCGRG00001022693	-	100	95.718	ENSRROG00000025545	PAPOLA	100	95.718	Rhinopithecus_roxellana
ENSCGRG00001022693	-	99	96.413	ENSSBOG00000024061	PAPOLA	100	96.413	Saimiri_boliviensis_boliviensis
ENSCGRG00001022693	-	99	95.109	ENSSHAG00000015211	PAPOLA	100	94.858	Sarcophilus_harrisii
ENSCGRG00001022693	-	100	71.448	ENSSFOG00015004431	papola	99	84.810	Scleropages_formosus
ENSCGRG00001022693	-	98	47.731	ENSSDUG00000018247	-	97	46.695	Seriola_dumerili
ENSCGRG00001022693	-	100	92.297	ENSSPUG00000005835	PAPOLA	100	92.297	Sphenodon_punctatus
ENSCGRG00001022693	-	100	97.547	ENSSSCG00000002505	-	100	97.547	Sus_scrofa
ENSCGRG00001022693	-	99	90.773	ENSTGUG00000012687	PAPOLA	99	90.773	Taeniopygia_guttata
ENSCGRG00001022693	-	75	88.043	ENSTBEG00000000194	PAPOLA	75	88.043	Tupaia_belangeri
ENSCGRG00001022693	-	79	96.875	ENSTTRG00000005717	PAPOLA	80	89.535	Tursiops_truncatus
ENSCGRG00001022693	-	61	99.052	ENSUAMG00000025737	PAPOLA	98	99.052	Ursus_americanus
ENSCGRG00001022693	-	99	95.788	ENSVPAG00000006464	PAPOLA	100	95.788	Vicugna_pacos
ENSCGRG00001022693	-	100	97.547	ENSVVUG00000028340	PAPOLA	100	97.547	Vulpes_vulpes
ENSCGRG00001022693	-	100	83.762	ENSXETG00000013949	papola	100	83.762	Xenopus_tropicalis