EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001022738 (Gene tree)
Gene ID: -
Gene Symbol: Ercc6l2
Alias: 0610007P08Rik|1700019D06Rik|9330134C04Rik
Full Name: excision repair cross-complementing rodent repair deficiency%2C complementation group 6 like 2
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 55906 bases
Position: chrscaffold_6:75174891-75230796
Accession: 1923501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001025000	ResIII	PF04851.15	2.3e-11	1	1
ENSCGRP00001024994	ResIII	PF04851.15	1.1e-09	1	1
ENSCGRP00001025000	DEAD	PF00270.29	3.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001029240	-	1386	-	ENSCGRP00001024994	461 (aa)	-	-
ENSCGRT00001029246	-	2100	-	ENSCGRP00001025000	700 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001022738's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001022738's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001022738	Ercc6l2	81	30.523	ENSCGRG00001014807	Rad54l	72	30.523
ENSCGRG00001022738	Ercc6l2	83	30.252	ENSCGRG00001020184	Rad54b	61	30.252
ENSCGRG00001022738	Ercc6l2	76	32.593	ENSCGRG00001021624	Chd1l	50	32.778

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001022738	Ercc6l2	99	89.016	ENSG00000182150	ERCC6L2	100	96.341	Homo_sapiens
ENSCGRG00001022738	Ercc6l2	93	88.345	ENSAMEG00000011657	ERCC6L2	97	87.980	Ailuropoda_melanoleuca
ENSCGRG00001022738	Ercc6l2	99	75.323	ENSAPLG00000006105	ERCC6L2	99	75.323	Anas_platyrhynchos
ENSCGRG00001022738	Ercc6l2	98	76.350	ENSACAG00000012947	ERCC6L2	100	76.350	Anolis_carolinensis
ENSCGRG00001022738	Ercc6l2	95	62.389	ENSACLG00000015088	ercc6l2	66	62.389	Astatotilapia_calliptera
ENSCGRG00001022738	Ercc6l2	99	89.286	ENSCJAG00000008862	ERCC6L2	98	89.286	Callithrix_jacchus
ENSCGRG00001022738	Ercc6l2	99	87.286	ENSCAFG00000001219	ERCC6L2	70	87.286	Canis_familiaris
ENSCGRG00001022738	Ercc6l2	99	88.857	ENSTSYG00000013871	ERCC6L2	99	88.857	Carlito_syrichta
ENSCGRG00001022738	Ercc6l2	92	80.094	ENSCAPG00000009212	ERCC6L2	100	80.094	Cavia_aperea
ENSCGRG00001022738	Ercc6l2	99	86.657	ENSCPOG00000004544	-	99	83.333	Cavia_porcellus
ENSCGRG00001022738	Ercc6l2	99	89.301	ENSCCAG00000026980	ERCC6L2	98	89.301	Cebus_capucinus
ENSCGRG00001022738	Ercc6l2	99	76.857	ENSCHOG00000006282	ERCC6L2	98	76.857	Choloepus_hoffmanni
ENSCGRG00001022738	Ercc6l2	99	88.588	ENSCANG00000039934	ERCC6L2	98	88.588	Colobus_angolensis_palliatus
ENSCGRG00001022738	Ercc6l2	93	99.766	ENSCGRG00000015854	Ercc6l2	66	100.000	Cricetulus_griseus_crigri
ENSCGRG00001022738	Ercc6l2	97	86.444	ENSDORG00000010788	Ercc6l2	98	86.889	Dipodomys_ordii
ENSCGRG00001022738	Ercc6l2	99	82.857	ENSETEG00000010686	ERCC6L2	98	82.857	Echinops_telfairi
ENSCGRG00001022738	Ercc6l2	99	70.185	ENSEEUG00000009341	ERCC6L2	99	70.185	Erinaceus_europaeus
ENSCGRG00001022738	Ercc6l2	98	77.339	ENSFALG00000003400	ERCC6L2	63	77.339	Ficedula_albicollis
ENSCGRG00001022738	Ercc6l2	99	86.857	ENSFDAG00000000805	ERCC6L2	99	86.857	Fukomys_damarensis
ENSCGRG00001022738	Ercc6l2	93	63.573	ENSGMOG00000007751	ercc6l2	61	65.798	Gadus_morhua
ENSCGRG00001022738	Ercc6l2	93	65.187	ENSGACG00000006992	ercc6l2	58	65.785	Gasterosteus_aculeatus
ENSCGRG00001022738	Ercc6l2	99	89.158	ENSGGOG00000002705	ERCC6L2	98	89.158	Gorilla_gorilla
ENSCGRG00001022738	Ercc6l2	80	94.915	ENSHGLG00000009488	ERCC6L2	95	93.370	Heterocephalus_glaber_female
ENSCGRG00001022738	Ercc6l2	99	87.732	ENSJJAG00000018150	Ercc6l2	100	87.732	Jaculus_jaculus
ENSCGRG00001022738	Ercc6l2	99	86.771	ENSLAFG00000013092	ERCC6L2	100	86.771	Loxodonta_africana
ENSCGRG00001022738	Ercc6l2	99	88.302	ENSMNEG00000035630	ERCC6L2	98	88.302	Macaca_nemestrina
ENSCGRG00001022738	Ercc6l2	99	88.730	ENSMLEG00000019530	ERCC6L2	98	88.730	Mandrillus_leucophaeus
ENSCGRG00001022738	Ercc6l2	99	95.683	ENSMAUG00000004820	-	66	97.636	Mesocricetus_auratus
ENSCGRG00001022738	Ercc6l2	99	90.442	ENSMICG00000029160	ERCC6L2	98	90.442	Microcebus_murinus
ENSCGRG00001022738	Ercc6l2	99	93.900	ENSMOCG00000019362	-	98	93.900	Microtus_ochrogaster
ENSCGRG00001022738	Ercc6l2	98	61.850	ENSMMOG00000001419	ercc6l2	59	61.850	Mola_mola
ENSCGRG00001022738	Ercc6l2	98	63.597	ENSMALG00000016933	ercc6l2	60	67.363	Monopterus_albus
ENSCGRG00001022738	Ercc6l2	99	92.275	MGP_CAROLIEiJ_G0018635	-	100	93.129	Mus_caroli
ENSCGRG00001022738	Ercc6l2	99	92.704	ENSMUSG00000021470	Ercc6l2	100	92.704	Mus_musculus
ENSCGRG00001022738	Ercc6l2	99	93.133	MGP_PahariEiJ_G0019699	-	100	94.006	Mus_pahari
ENSCGRG00001022738	Ercc6l2	99	92.418	MGP_SPRETEiJ_G0019515	-	100	93.275	Mus_spretus
ENSCGRG00001022738	Ercc6l2	93	87.850	ENSMPUG00000006738	ERCC6L2	68	87.227	Mustela_putorius_furo
ENSCGRG00001022738	Ercc6l2	99	85.755	ENSMLUG00000000845	ERCC6L2	98	85.755	Myotis_lucifugus
ENSCGRG00001022738	Ercc6l2	100	90.157	ENSNGAG00000016174	Ercc6l2	100	90.157	Nannospalax_galili
ENSCGRG00001022738	Ercc6l2	99	89.158	ENSNLEG00000016784	ERCC6L2	98	89.158	Nomascus_leucogenys
ENSCGRG00001022738	Ercc6l2	93	87.879	ENSOPRG00000011647	ERCC6L2	100	88.746	Ochotona_princeps
ENSCGRG00001022738	Ercc6l2	99	86.963	ENSODEG00000016588	ERCC6L2	98	88.318	Octodon_degus
ENSCGRG00001022738	Ercc6l2	99	60.567	ENSONIG00000015139	ercc6l2	99	60.709	Oreochromis_niloticus
ENSCGRG00001022738	Ercc6l2	99	88.588	ENSOCUG00000000442	-	100	88.445	Oryctolagus_cuniculus
ENSCGRG00001022738	Ercc6l2	93	65.654	ENSORLG00000004287	ercc6l2	58	68.085	Oryzias_latipes
ENSCGRG00001022738	Ercc6l2	93	65.654	ENSORLG00015010250	ercc6l2	58	68.627	Oryzias_latipes_hsok
ENSCGRG00001022738	Ercc6l2	93	91.142	ENSOGAG00000003146	ERCC6L2	66	92.308	Otolemur_garnettii
ENSCGRG00001022738	Ercc6l2	98	89.620	ENSOARG00000008546	ERCC6L2	71	88.555	Ovis_aries
ENSCGRG00001022738	Ercc6l2	99	89.301	ENSPPAG00000035061	ERCC6L2	98	89.301	Pan_paniscus
ENSCGRG00001022738	Ercc6l2	99	88.857	ENSPPRG00000019238	ERCC6L2	98	88.857	Panthera_pardus
ENSCGRG00001022738	Ercc6l2	99	88.714	ENSPTIG00000009148	ERCC6L2	98	88.714	Panthera_tigris_altaica
ENSCGRG00001022738	Ercc6l2	99	89.158	ENSPTRG00000048689	ERCC6L2	98	89.158	Pan_troglodytes
ENSCGRG00001022738	Ercc6l2	98	79.562	ENSPSIG00000010627	ERCC6L2	100	79.562	Pelodiscus_sinensis
ENSCGRG00001022738	Ercc6l2	98	95.168	ENSPEMG00000006631	-	66	95.636	Peromyscus_maniculatus_bairdii
ENSCGRG00001022738	Ercc6l2	97	82.164	ENSPCIG00000020095	-	58	82.164	Phascolarctos_cinereus
ENSCGRG00001022738	Ercc6l2	99	85.571	ENSPCOG00000026714	ERCC6L2	98	85.571	Propithecus_coquereli
ENSCGRG00001022738	Ercc6l2	93	86.713	ENSPVAG00000003926	ERCC6L2	98	79.601	Pteropus_vampyrus
ENSCGRG00001022738	Ercc6l2	95	62.426	ENSPNYG00000015347	ercc6l2	63	62.426	Pundamilia_nyererei
ENSCGRG00001022738	Ercc6l2	99	85.143	ENSRBIG00000018434	ERCC6L2	98	85.143	Rhinopithecus_bieti
ENSCGRG00001022738	Ercc6l2	99	88.588	ENSRROG00000029000	ERCC6L2	98	88.588	Rhinopithecus_roxellana
ENSCGRG00001022738	Ercc6l2	84	79.587	ENSSHAG00000000781	-	100	79.587	Sarcophilus_harrisii
ENSCGRG00001022738	Ercc6l2	98	62.571	ENSSLDG00000018663	ercc6l2	61	64.145	Seriola_lalandi_dorsalis
ENSCGRG00001022738	Ercc6l2	99	76.547	ENSSPUG00000004336	ERCC6L2	54	75.976	Sphenodon_punctatus
ENSCGRG00001022738	Ercc6l2	98	60.485	ENSSPAG00000004484	ercc6l2	60	60.628	Stegastes_partitus
ENSCGRG00001022738	Ercc6l2	98	76.462	ENSTGUG00000000524	ERCC6L2	100	76.462	Taeniopygia_guttata
ENSCGRG00001022738	Ercc6l2	99	59.915	ENSTRUG00000014634	ercc6l2	66	59.915	Takifugu_rubripes
ENSCGRG00001022738	Ercc6l2	84	88.083	ENSTBEG00000014213	ERCC6L2	87	94.340	Tupaia_belangeri
ENSCGRG00001022738	Ercc6l2	99	83.024	ENSTTRG00000005372	ERCC6L2	98	83.024	Tursiops_truncatus
ENSCGRG00001022738	Ercc6l2	93	90.210	ENSVPAG00000004701	ERCC6L2	99	89.557	Vicugna_pacos
ENSCGRG00001022738	Ercc6l2	97	72.754	ENSXETG00000014835	ercc6l2	63	72.754	Xenopus_tropicalis