EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCGRG00001022833 (Gene tree)
Gene ID
-
Gene Symbol
Rbms1
Alias
2600014B10Rik|MSSP-1|MSSP-2|MSSP-3|YC1
Full Name
RNA binding motif single stranded interacting protein 1
Gene Type
protein_coding
Species
Cricetulus_griseus_chok1gshd
Status
putative
Strand
Plus strand
Length
210760 bases
Position
chrscaffold_3:90111499-90322258
Accession
100767838
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCGRP00001025152RRM_1PF00076.226.6e-3312
ENSCGRP00001025152RRM_1PF00076.226.6e-3322
ENSCGRP00001025159RRM_1PF00076.227.1e-3312
ENSCGRP00001025159RRM_1PF00076.227.1e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCGRT00001029398-1212-ENSCGRP00001025152403 (aa)XP_003500490UPI00022F423F
ENSCGRT00001029405-4288-ENSCGRP00001025159417 (aa)--
Gene Model
Click here to download ENSCGRG00001022833's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001022833's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCGRG00001022833Rbms110069.267ENSCGRG00001007243Rbms39971.698
ENSCGRG00001022833Rbms15633.871ENSCGRG00001020348Elavl47334.783
ENSCGRG00001022833Rbms19272.043ENSCGRG00001023923Rbms28773.504
ENSCGRG00001022833Rbms15135.484ENSCGRG00001018927Elavl36336.207
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCGRG00001022833Rbms110097.044ENSG00000153250RBMS110099.213Homo_sapiens
ENSCGRG00001022833Rbms110072.749ENSAPOG00000024437-10071.801Acanthochromis_polyacanthus
ENSCGRG00001022833Rbms19061.436ENSAPOG00000013761rbms1a8964.826Acanthochromis_polyacanthus
ENSCGRG00001022833Rbms19496.094ENSAMEG00000012661RBMS110096.094Ailuropoda_melanoleuca
ENSCGRG00001022833Rbms18658.551ENSACIG00000000113rbms1a8958.721Amphilophus_citrinellus
ENSCGRG00001022833Rbms19675.578ENSACIG00000021498RBMS19775.578Amphilophus_citrinellus
ENSCGRG00001022833Rbms19958.738ENSAOCG00000010066rbms1a8965.217Amphiprion_ocellaris
ENSCGRG00001022833Rbms110073.397ENSAOCG00000014482-10073.397Amphiprion_ocellaris
ENSCGRG00001022833Rbms110073.159ENSAPEG00000018371-10073.159Amphiprion_percula
ENSCGRG00001022833Rbms19958.738ENSAPEG00000023563rbms1a8965.116Amphiprion_percula
ENSCGRG00001022833Rbms110070.784ENSATEG00000018573RBMS110070.309Anabas_testudineus
ENSCGRG00001022833Rbms19958.981ENSATEG00000015450rbms1a8965.407Anabas_testudineus
ENSCGRG00001022833Rbms19592.932ENSAPLG00000007282RBMS110092.911Anas_platyrhynchos
ENSCGRG00001022833Rbms19591.451ENSACAG00000011984RBMS18089.637Anolis_carolinensis
ENSCGRG00001022833Rbms17996.894ENSANAG00000024424RBMS110096.894Aotus_nancymaae
ENSCGRG00001022833Rbms110070.714ENSACLG00000013048RBMS110070.714Astatotilapia_calliptera
ENSCGRG00001022833Rbms18664.348ENSACLG00000021512rbms1a9064.535Astatotilapia_calliptera
ENSCGRG00001022833Rbms110074.020ENSAMXG00000009969RBMS110075.245Astyanax_mexicanus
ENSCGRG00001022833Rbms110068.009ENSAMXG00000002146rbms1a9967.062Astyanax_mexicanus
ENSCGRG00001022833Rbms110095.952ENSBTAG00000005180RBMS110095.952Bos_taurus
ENSCGRG00001022833Rbms19990.773ENSCJAG00000012871-9994.638Callithrix_jacchus
ENSCGRG00001022833Rbms19191.257ENSCJAG00000022465-9890.765Callithrix_jacchus
ENSCGRG00001022833Rbms110097.291ENSCJAG00000014861-10097.291Callithrix_jacchus
ENSCGRG00001022833Rbms19597.975ENSCAFG00000009922RBMS110092.381Canis_familiaris
ENSCGRG00001022833Rbms110098.015ENSCAFG00020006120RBMS110098.015Canis_lupus_dingo
ENSCGRG00001022833Rbms110098.015ENSCHIG00000023380RBMS110098.015Capra_hircus
ENSCGRG00001022833Rbms110097.291ENSTSYG00000005584RBMS110097.838Carlito_syrichta
ENSCGRG00001022833Rbms110098.015ENSCPOG00000012310RBMS110098.015Cavia_porcellus
ENSCGRG00001022833Rbms110097.291ENSCCAG00000033841RBMS110097.291Cebus_capucinus
ENSCGRG00001022833Rbms110097.291ENSCATG00000043032RBMS110097.927Cercocebus_atys
ENSCGRG00001022833Rbms110098.263ENSCLAG00000003031RBMS110098.263Chinchilla_lanigera
ENSCGRG00001022833Rbms110097.291ENSCSAG00000015687RBMS110097.291Chlorocebus_sabaeus
ENSCGRG00001022833Rbms15497.761ENSCHOG00000001579RBMS17397.761Choloepus_hoffmanni
ENSCGRG00001022833Rbms110093.350ENSCPBG00000026455RBMS110093.350Chrysemys_picta_bellii
ENSCGRG00001022833Rbms110097.291ENSCANG00000042152RBMS110097.838Colobus_angolensis_palliatus
ENSCGRG00001022833Rbms1100100.000ENSCGRG00000008824Rbms1100100.000Cricetulus_griseus_crigri
ENSCGRG00001022833Rbms18962.222ENSCSEG00000000889rbms1a9062.791Cynoglossus_semilaevis
ENSCGRG00001022833Rbms110068.558ENSCSEG00000010652RBMS19473.295Cynoglossus_semilaevis
ENSCGRG00001022833Rbms110069.121ENSCVAG00000002027RBMS19675.568Cyprinodon_variegatus
ENSCGRG00001022833Rbms19958.738ENSCVAG00000014698rbms1a8964.826Cyprinodon_variegatus
ENSCGRG00001022833Rbms110067.849ENSDARG00000074023rbms1a9966.903Danio_rerio
ENSCGRG00001022833Rbms19396.658ENSDNOG00000040691RBMS110096.658Dasypus_novemcinctus
ENSCGRG00001022833Rbms110098.015ENSDORG00000007103Rbms110098.187Dipodomys_ordii
ENSCGRG00001022833Rbms19485.564ENSETEG00000012135RBMS110085.564Echinops_telfairi
ENSCGRG00001022833Rbms110095.714ENSEASG00005023132RBMS110095.714Equus_asinus_asinus
ENSCGRG00001022833Rbms110096.798ENSECAG00000019894RBMS110096.798Equus_caballus
ENSCGRG00001022833Rbms179100.000ENSEEUG00000005628RBMS179100.000Erinaceus_europaeus
ENSCGRG00001022833Rbms19961.005ENSELUG00000018923rbms1a9468.000Esox_lucius
ENSCGRG00001022833Rbms19370.789ENSELUG00000019328RBMS19470.789Esox_lucius
ENSCGRG00001022833Rbms110097.044ENSFCAG00000012524RBMS110097.568Felis_catus
ENSCGRG00001022833Rbms18793.123ENSFALG00000004440RBMS19493.123Ficedula_albicollis
ENSCGRG00001022833Rbms110098.511ENSFDAG00000015692RBMS110098.511Fukomys_damarensis
ENSCGRG00001022833Rbms19958.738ENSFHEG00000005662rbms1a7981.529Fundulus_heteroclitus
ENSCGRG00001022833Rbms110068.409ENSFHEG00000000720RBMS110068.646Fundulus_heteroclitus
ENSCGRG00001022833Rbms18363.506ENSGMOG00000000525rbms1a9962.778Gadus_morhua
ENSCGRG00001022833Rbms110088.729ENSGALG00000011132RBMS110088.729Gallus_gallus
ENSCGRG00001022833Rbms18964.444ENSGAFG00000011633rbms1a9565.116Gambusia_affinis
ENSCGRG00001022833Rbms19473.177ENSGAFG00000007708RBMS19771.358Gambusia_affinis
ENSCGRG00001022833Rbms19061.968ENSGACG00000015174rbms1a9166.254Gasterosteus_aculeatus
ENSCGRG00001022833Rbms110069.359ENSGACG00000005671RBMS110068.884Gasterosteus_aculeatus
ENSCGRG00001022833Rbms110093.103ENSGAGG00000007866RBMS110093.103Gopherus_agassizii
ENSCGRG00001022833Rbms110089.524ENSGGOG00000043756-10089.524Gorilla_gorilla
ENSCGRG00001022833Rbms19695.641ENSGGOG00000001264RBMS110097.668Gorilla_gorilla
ENSCGRG00001022833Rbms18664.348ENSHBUG00000004802rbms1a9064.535Haplochromis_burtoni
ENSCGRG00001022833Rbms19472.658ENSHBUG00000004516RBMS19476.880Haplochromis_burtoni
ENSCGRG00001022833Rbms110097.767ENSHGLG00000010387RBMS110097.767Heterocephalus_glaber_female
ENSCGRG00001022833Rbms19894.221ENSHGLG00100014105RBMS110097.716Heterocephalus_glaber_male
ENSCGRG00001022833Rbms110068.409ENSHCOG00000016668RBMS110068.409Hippocampus_comes
ENSCGRG00001022833Rbms18962.778ENSHCOG00000020097rbms1a8963.372Hippocampus_comes
ENSCGRG00001022833Rbms110068.246ENSIPUG00000010131RBMS19967.299Ictalurus_punctatus
ENSCGRG00001022833Rbms110077.396ENSIPUG00000014677RBMS110077.396Ictalurus_punctatus
ENSCGRG00001022833Rbms110098.263ENSSTOG00000012501RBMS110098.263Ictidomys_tridecemlineatus
ENSCGRG00001022833Rbms110097.767ENSJJAG00000016543Rbms110097.767Jaculus_jaculus
ENSCGRG00001022833Rbms19377.394ENSKMAG00000013911RBMS19477.394Kryptolebias_marmoratus
ENSCGRG00001022833Rbms19060.212ENSKMAG00000011839-8963.478Kryptolebias_marmoratus
ENSCGRG00001022833Rbms110071.259ENSLBEG00000005787RBMS110071.259Labrus_bergylta
ENSCGRG00001022833Rbms19958.495ENSLBEG00000025962rbms1a8964.826Labrus_bergylta
ENSCGRG00001022833Rbms110076.832ENSLACG00000004324RBMS110075.945Latimeria_chalumnae
ENSCGRG00001022833Rbms110077.910ENSLOCG00000008622rbms1a9484.043Lepisosteus_oculatus
ENSCGRG00001022833Rbms19496.834ENSLAFG00000017217RBMS110096.834Loxodonta_africana
ENSCGRG00001022833Rbms110097.291ENSMFAG00000000274RBMS110097.838Macaca_fascicularis
ENSCGRG00001022833Rbms110097.291ENSMMUG00000016825RBMS110097.291Macaca_mulatta
ENSCGRG00001022833Rbms110097.291ENSMNEG00000039425RBMS110097.838Macaca_nemestrina
ENSCGRG00001022833Rbms19992.346ENSMLEG00000031517RBMS110097.568Mandrillus_leucophaeus
ENSCGRG00001022833Rbms110070.546ENSMAMG00000003159-10071.021Mastacembelus_armatus
ENSCGRG00001022833Rbms19957.039ENSMAMG00000005018rbms1a8963.081Mastacembelus_armatus
ENSCGRG00001022833Rbms18177.439ENSMZEG00005007313RBMS19177.676Maylandia_zebra
ENSCGRG00001022833Rbms18664.348ENSMZEG00005005661rbms1a9064.535Maylandia_zebra
ENSCGRG00001022833Rbms18792.330ENSMGAG00000011054RBMS110091.185Meleagris_gallopavo
ENSCGRG00001022833Rbms110099.504ENSMAUG00000008550Rbms110099.504Mesocricetus_auratus
ENSCGRG00001022833Rbms110096.798ENSMICG00000008325RBMS110097.409Microcebus_murinus
ENSCGRG00001022833Rbms110098.759ENSMOCG00000022617Rbms110098.759Microtus_ochrogaster
ENSCGRG00001022833Rbms110071.021ENSMMOG00000003707RBMS19675.521Mola_mola
ENSCGRG00001022833Rbms18760.548ENSMMOG00000018249rbms1a8168.456Mola_mola
ENSCGRG00001022833Rbms110094.541ENSMODG00000005250RBMS110094.541Monodelphis_domestica
ENSCGRG00001022833Rbms19958.495ENSMALG00000014235rbms1a8964.826Monopterus_albus
ENSCGRG00001022833Rbms19669.652ENSMALG00000015715-9967.866Monopterus_albus
ENSCGRG00001022833Rbms110098.015MGP_CAROLIEiJ_G0023586Rbms110098.015Mus_caroli
ENSCGRG00001022833Rbms110098.015ENSMUSG00000026970Rbms110098.015Mus_musculus
ENSCGRG00001022833Rbms110097.602MGP_PahariEiJ_G0025037Rbms110097.602Mus_pahari
ENSCGRG00001022833Rbms110098.263MGP_SPRETEiJ_G0024508Rbms110098.263Mus_spretus
ENSCGRG00001022833Rbms110094.511ENSMPUG00000000539RBMS110094.511Mustela_putorius_furo
ENSCGRG00001022833Rbms19596.222ENSMLUG00000008762RBMS19596.222Myotis_lucifugus
ENSCGRG00001022833Rbms110098.511ENSNGAG00000013636Rbms110098.511Nannospalax_galili
ENSCGRG00001022833Rbms17467.000ENSNBRG00000020217rbms1a8567.333Neolamprologus_brichardi
ENSCGRG00001022833Rbms18772.521ENSNBRG00000015151RBMS19472.727Neolamprologus_brichardi
ENSCGRG00001022833Rbms110097.044ENSNLEG00000001667RBMS110097.568Nomascus_leucogenys
ENSCGRG00001022833Rbms17979.814ENSMEUG00000000746RBMS110079.814Notamacropus_eugenii
ENSCGRG00001022833Rbms110090.148ENSOPRG00000012431RBMS110090.148Ochotona_princeps
ENSCGRG00001022833Rbms110098.263ENSODEG00000013934RBMS110098.263Octodon_degus
ENSCGRG00001022833Rbms19958.838ENSONIG00000003329rbms1a8865.407Oreochromis_niloticus
ENSCGRG00001022833Rbms110071.190ENSONIG00000008934RBMS110071.190Oreochromis_niloticus
ENSCGRG00001022833Rbms15356.485ENSOANG00000004477-9957.500Ornithorhynchus_anatinus
ENSCGRG00001022833Rbms19493.438ENSOANG00000006166RBMS19693.438Ornithorhynchus_anatinus
ENSCGRG00001022833Rbms19496.570ENSOCUG00000017365RBMS18996.570Oryctolagus_cuniculus
ENSCGRG00001022833Rbms19668.069ENSORLG00000016818RBMS19966.746Oryzias_latipes
ENSCGRG00001022833Rbms18962.222ENSORLG00000003917rbms1a9062.791Oryzias_latipes
ENSCGRG00001022833Rbms18961.944ENSORLG00020018663rbms1a9062.500Oryzias_latipes_hni
ENSCGRG00001022833Rbms19667.822ENSORLG00020022335RBMS19966.508Oryzias_latipes_hni
ENSCGRG00001022833Rbms19668.317ENSORLG00015018208RBMS19966.983Oryzias_latipes_hsok
ENSCGRG00001022833Rbms18962.222ENSORLG00015016556rbms1a9062.899Oryzias_latipes_hsok
ENSCGRG00001022833Rbms19668.734ENSOMEG00000002394RBMS19967.381Oryzias_melastigma
ENSCGRG00001022833Rbms19295.733ENSOGAG00000002900RBMS110095.733Otolemur_garnettii
ENSCGRG00001022833Rbms110098.015ENSOARG00000006870RBMS110098.015Ovis_aries
ENSCGRG00001022833Rbms19597.722ENSPPAG00000040083RBMS19997.722Pan_paniscus
ENSCGRG00001022833Rbms19392.819ENSPPAG00000036520-9992.819Pan_paniscus
ENSCGRG00001022833Rbms110097.044ENSPPRG00000005040RBMS110097.568Panthera_pardus
ENSCGRG00001022833Rbms19496.850ENSPTIG00000021240RBMS110097.568Panthera_tigris_altaica
ENSCGRG00001022833Rbms19593.264ENSPTRG00000039358-10093.005Pan_troglodytes
ENSCGRG00001022833Rbms110097.044ENSPTRG00000052304RBMS110097.044Pan_troglodytes
ENSCGRG00001022833Rbms110098.015ENSPANG00000001383RBMS110098.015Papio_anubis
ENSCGRG00001022833Rbms19672.030ENSPKIG00000012818rbms1a10075.062Paramormyrops_kingsleyae
ENSCGRG00001022833Rbms110077.506ENSPKIG00000001498rbms1a10076.528Paramormyrops_kingsleyae
ENSCGRG00001022833Rbms110093.797ENSPSIG00000010240RBMS110093.797Pelodiscus_sinensis
ENSCGRG00001022833Rbms18176.435ENSPMGG00000006310RBMS19568.016Periophthalmus_magnuspinnatus
ENSCGRG00001022833Rbms19954.964ENSPMGG00000004341rbms1a9060.870Periophthalmus_magnuspinnatus
ENSCGRG00001022833Rbms110099.752ENSPEMG00000009449Rbms110099.752Peromyscus_maniculatus_bairdii
ENSCGRG00001022833Rbms110094.541ENSPCIG00000018405RBMS110094.541Phascolarctos_cinereus
ENSCGRG00001022833Rbms19958.738ENSPFOG00000016116rbms1a8965.116Poecilia_formosa
ENSCGRG00001022833Rbms110069.834ENSPFOG00000017483RBMS110069.834Poecilia_formosa
ENSCGRG00001022833Rbms110068.884ENSPLAG00000000920RBMS110070.071Poecilia_latipinna
ENSCGRG00001022833Rbms19958.738ENSPLAG00000013864rbms1a8965.116Poecilia_latipinna
ENSCGRG00001022833Rbms19958.738ENSPMEG00000016185rbms1a8965.116Poecilia_mexicana
ENSCGRG00001022833Rbms110069.834ENSPMEG00000015838RBMS110069.834Poecilia_mexicana
ENSCGRG00001022833Rbms19958.738ENSPREG00000020161rbms1a8965.116Poecilia_reticulata
ENSCGRG00001022833Rbms110070.071ENSPREG00000008146RBMS110070.071Poecilia_reticulata
ENSCGRG00001022833Rbms110093.128ENSPPYG00000012879-10093.128Pongo_abelii
ENSCGRG00001022833Rbms110090.394ENSPCAG00000009673RBMS110090.394Procavia_capensis
ENSCGRG00001022833Rbms110097.044ENSPCOG00000027294RBMS110097.568Propithecus_coquereli
ENSCGRG00001022833Rbms18898.618ENSPVAG00000010429RBMS18798.618Pteropus_vampyrus
ENSCGRG00001022833Rbms110071.190ENSPNYG00000002643RBMS110071.190Pundamilia_nyererei
ENSCGRG00001022833Rbms18773.580ENSPNAG00000010225rbms1a8873.580Pygocentrus_nattereri
ENSCGRG00001022833Rbms110075.000ENSPNAG00000023479RBMS110076.225Pygocentrus_nattereri
ENSCGRG00001022833Rbms110098.263ENSRNOG00000008482Rbms110098.263Rattus_norvegicus
ENSCGRG00001022833Rbms110097.044ENSRBIG00000044262RBMS110097.044Rhinopithecus_bieti
ENSCGRG00001022833Rbms110096.190ENSRROG00000043108RBMS110096.190Rhinopithecus_roxellana
ENSCGRG00001022833Rbms19397.172ENSSBOG00000034705RBMS110097.172Saimiri_boliviensis_boliviensis
ENSCGRG00001022833Rbms110094.293ENSSHAG00000012271RBMS110094.293Sarcophilus_harrisii
ENSCGRG00001022833Rbms18778.693ENSSFOG00015014493rbms1a9578.693Scleropages_formosus
ENSCGRG00001022833Rbms19979.703ENSSFOG00015022929rbms19979.703Scleropages_formosus
ENSCGRG00001022833Rbms18664.348ENSSMAG00000012722rbms1a9564.535Scophthalmus_maximus
ENSCGRG00001022833Rbms110071.496ENSSMAG00000012152RBMS19671.496Scophthalmus_maximus
ENSCGRG00001022833Rbms19958.738ENSSDUG00000020602rbms1a9565.116Seriola_dumerili
ENSCGRG00001022833Rbms110071.971ENSSDUG00000018803RBMS110071.971Seriola_dumerili
ENSCGRG00001022833Rbms110071.734ENSSLDG00000016556RBMS110071.734Seriola_lalandi_dorsalis
ENSCGRG00001022833Rbms19958.738ENSSLDG00000009495rbms1a8965.116Seriola_lalandi_dorsalis
ENSCGRG00001022833Rbms110068.473ENSSARG00000011085RBMS110068.473Sorex_araneus
ENSCGRG00001022833Rbms18792.614ENSSPUG00000017163RBMS19492.614Sphenodon_punctatus
ENSCGRG00001022833Rbms19958.252ENSSPAG00000005371rbms1a8964.535Stegastes_partitus
ENSCGRG00001022833Rbms110072.684ENSSPAG00000000059RBMS110072.684Stegastes_partitus
ENSCGRG00001022833Rbms110094.272ENSSSCG00000015888RBMS110094.272Sus_scrofa
ENSCGRG00001022833Rbms110093.548ENSTGUG00000006606RBMS110093.548Taeniopygia_guttata
ENSCGRG00001022833Rbms18563.743ENSTRUG00000017155rbms1a8963.663Takifugu_rubripes
ENSCGRG00001022833Rbms110066.430ENSTRUG00000005466-9672.021Takifugu_rubripes
ENSCGRG00001022833Rbms18762.108ENSTNIG00000009477rbms1a9962.346Tetraodon_nigroviridis
ENSCGRG00001022833Rbms19373.740ENSTNIG00000016496RBMS19775.852Tetraodon_nigroviridis
ENSCGRG00001022833Rbms19486.614ENSTBEG00000016156RBMS110086.614Tupaia_belangeri
ENSCGRG00001022833Rbms19496.588ENSTTRG00000011058RBMS110096.588Tursiops_truncatus
ENSCGRG00001022833Rbms110097.519ENSUAMG00000022331RBMS110097.519Ursus_americanus
ENSCGRG00001022833Rbms19596.985ENSUMAG00000008605RBMS19996.985Ursus_maritimus
ENSCGRG00001022833Rbms19495.276ENSVPAG00000002716RBMS110095.276Vicugna_pacos
ENSCGRG00001022833Rbms110094.272ENSVVUG00000018682RBMS110098.187Vulpes_vulpes
ENSCGRG00001022833Rbms19482.245ENSXETG00000016204rbms110081.462Xenopus_tropicalis
ENSCGRG00001022833Rbms18775.000ENSXCOG00000000211RBMS19575.000Xiphophorus_couchianus
ENSCGRG00001022833Rbms18961.389ENSXCOG00000001659rbms1a8961.919Xiphophorus_couchianus
ENSCGRG00001022833Rbms18964.444ENSXMAG00000001802rbms1a8965.116Xiphophorus_maculatus
ENSCGRG00001022833Rbms110069.834ENSXMAG00000011405RBMS110069.834Xiphophorus_maculatus

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