EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001022955 (Gene tree)
Gene ID: -
Gene Symbol: Swt1
Alias: 1200016B10Rik
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 65124 bases
Position: chrscaffold_1:39778872-39843995
Accession: 100752723
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001025342	PIN_4	PF13638.6	6.8e-28	1	1
ENSCGRP00001025335	PIN_4	PF13638.6	7.4e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001029581	-	2739	-	ENSCGRP00001025335	912 (aa)	-	-
ENSCGRT00001029588	-	3330	XM_007630442	ENSCGRP00001025342	863 (aa)	XP_007628632	UPI0004544CBF

Gene Model

Click here to download ENSCGRG00001022955's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001022955's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001022955	Swt1	98	73.149	ENSG00000116668	SWT1	99	73.149	Homo_sapiens
ENSCGRG00001022955	Swt1	63	33.962	ENSAPOG00000014897	-	58	33.904	Acanthochromis_polyacanthus
ENSCGRG00001022955	Swt1	100	69.657	ENSAMEG00000013585	SWT1	100	71.792	Ailuropoda_melanoleuca
ENSCGRG00001022955	Swt1	63	33.791	ENSAOCG00000013932	swt1	58	33.791	Amphiprion_ocellaris
ENSCGRG00001022955	Swt1	63	33.962	ENSAPEG00000009613	-	58	33.962	Amphiprion_percula
ENSCGRG00001022955	Swt1	63	35.069	ENSATEG00000018946	swt1	57	35.069	Anabas_testudineus
ENSCGRG00001022955	Swt1	70	52.397	ENSAPLG00000008607	SWT1	82	52.397	Anas_platyrhynchos
ENSCGRG00001022955	Swt1	68	46.633	ENSACAG00000002276	SWT1	68	46.633	Anolis_carolinensis
ENSCGRG00001022955	Swt1	98	72.486	ENSANAG00000027068	SWT1	99	72.848	Aotus_nancymaae
ENSCGRG00001022955	Swt1	67	32.195	ENSACLG00000009742	swt1	73	32.195	Astatotilapia_calliptera
ENSCGRG00001022955	Swt1	68	38.384	ENSAMXG00000010971	swt1	60	38.384	Astyanax_mexicanus
ENSCGRG00001022955	Swt1	70	65.438	ENSBTAG00000004492	SWT1	99	69.731	Bos_taurus
ENSCGRG00001022955	Swt1	100	69.536	ENSCJAG00000005544	SWT1	100	71.555	Callithrix_jacchus
ENSCGRG00001022955	Swt1	100	70.222	ENSCAFG00000013543	SWT1	98	72.506	Canis_familiaris
ENSCGRG00001022955	Swt1	100	69.045	ENSCAFG00020015648	SWT1	99	73.145	Canis_lupus_dingo
ENSCGRG00001022955	Swt1	92	72.922	ENSCHIG00000023511	SWT1	100	80.372	Capra_hircus
ENSCGRG00001022955	Swt1	98	74.062	ENSTSYG00000010470	SWT1	100	74.062	Carlito_syrichta
ENSCGRG00001022955	Swt1	93	71.617	ENSCPOG00000014251	SWT1	100	72.662	Cavia_porcellus
ENSCGRG00001022955	Swt1	98	73.620	ENSCCAG00000033926	SWT1	99	73.620	Cebus_capucinus
ENSCGRG00001022955	Swt1	98	72.907	ENSCATG00000042210	SWT1	99	81.772	Cercocebus_atys
ENSCGRG00001022955	Swt1	99	71.253	ENSCLAG00000013959	SWT1	99	72.452	Chinchilla_lanigera
ENSCGRG00001022955	Swt1	98	72.907	ENSCSAG00000012895	SWT1	99	73.377	Chlorocebus_sabaeus
ENSCGRG00001022955	Swt1	53	85.000	ENSCHOG00000002211	-	54	85.000	Choloepus_hoffmanni
ENSCGRG00001022955	Swt1	76	53.028	ENSCPBG00000015691	SWT1	78	51.321	Chrysemys_picta_bellii
ENSCGRG00001022955	Swt1	98	72.486	ENSCANG00000032207	SWT1	99	81.678	Colobus_angolensis_palliatus
ENSCGRG00001022955	Swt1	100	100.000	ENSCGRG00000010224	Swt1	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001022955	Swt1	70	33.125	ENSCSEG00000017352	swt1	85	32.936	Cynoglossus_semilaevis
ENSCGRG00001022955	Swt1	68	38.308	ENSDARG00000094010	swt1	69	36.052	Danio_rerio
ENSCGRG00001022955	Swt1	89	67.030	ENSDNOG00000005254	SWT1	100	68.000	Dasypus_novemcinctus
ENSCGRG00001022955	Swt1	100	69.522	ENSDORG00000010531	Swt1	100	70.968	Dipodomys_ordii
ENSCGRG00001022955	Swt1	90	71.205	ENSEASG00005005530	SWT1	98	71.103	Equus_asinus_asinus
ENSCGRG00001022955	Swt1	92	70.983	ENSECAG00000012085	SWT1	99	72.782	Equus_caballus
ENSCGRG00001022955	Swt1	85	82.759	ENSEEUG00000003664	SWT1	88	82.759	Erinaceus_europaeus
ENSCGRG00001022955	Swt1	72	34.870	ENSELUG00000020565	swt1	67	35.447	Esox_lucius
ENSCGRG00001022955	Swt1	100	71.160	ENSFCAG00000011286	SWT1	100	73.039	Felis_catus
ENSCGRG00001022955	Swt1	67	50.987	ENSFALG00000003206	SWT1	67	50.987	Ficedula_albicollis
ENSCGRG00001022955	Swt1	98	73.719	ENSFDAG00000007569	SWT1	100	73.244	Fukomys_damarensis
ENSCGRG00001022955	Swt1	71	49.841	ENSGALG00000034230	SWT1	74	49.238	Gallus_gallus
ENSCGRG00001022955	Swt1	72	31.871	ENSGAFG00000007803	-	68	31.871	Gambusia_affinis
ENSCGRG00001022955	Swt1	80	50.275	ENSGAGG00000025050	SWT1	99	56.822	Gopherus_agassizii
ENSCGRG00001022955	Swt1	61	81.679	ENSGGOG00000041167	-	95	81.679	Gorilla_gorilla
ENSCGRG00001022955	Swt1	69	32.283	ENSHBUG00000006188	swt1	73	32.283	Haplochromis_burtoni
ENSCGRG00001022955	Swt1	99	71.364	ENSHGLG00000006542	SWT1	99	72.460	Heterocephalus_glaber_female
ENSCGRG00001022955	Swt1	99	72.604	ENSHGLG00100014408	SWT1	99	73.702	Heterocephalus_glaber_male
ENSCGRG00001022955	Swt1	73	34.757	ENSIPUG00000009113	-	69	34.904	Ictalurus_punctatus
ENSCGRG00001022955	Swt1	100	72.142	ENSSTOG00000010356	SWT1	100	73.667	Ictidomys_tridecemlineatus
ENSCGRG00001022955	Swt1	98	71.715	ENSJJAG00000015927	Swt1	100	71.715	Jaculus_jaculus
ENSCGRG00001022955	Swt1	67	35.516	ENSKMAG00000012533	swt1	61	35.516	Kryptolebias_marmoratus
ENSCGRG00001022955	Swt1	63	35.813	ENSLBEG00000020663	-	57	35.813	Labrus_bergylta
ENSCGRG00001022955	Swt1	75	45.157	ENSLACG00000009194	SWT1	99	45.157	Latimeria_chalumnae
ENSCGRG00001022955	Swt1	63	41.049	ENSLOCG00000001749	swt1	98	41.002	Lepisosteus_oculatus
ENSCGRG00001022955	Swt1	68	82.313	ENSLAFG00000004346	-	100	82.313	Loxodonta_africana
ENSCGRG00001022955	Swt1	98	72.907	ENSMFAG00000031793	SWT1	99	82.051	Macaca_fascicularis
ENSCGRG00001022955	Swt1	98	70.633	ENSMMUG00000013882	SWT1	99	79.038	Macaca_mulatta
ENSCGRG00001022955	Swt1	98	73.018	ENSMNEG00000035502	SWT1	99	82.051	Macaca_nemestrina
ENSCGRG00001022955	Swt1	98	73.370	ENSMLEG00000038692	SWT1	99	81.942	Mandrillus_leucophaeus
ENSCGRG00001022955	Swt1	69	32.283	ENSMZEG00005018489	swt1	73	32.283	Maylandia_zebra
ENSCGRG00001022955	Swt1	67	50.756	ENSMGAG00000000973	SWT1	100	50.924	Meleagris_gallopavo
ENSCGRG00001022955	Swt1	100	86.587	ENSMAUG00000007996	Swt1	100	86.587	Mesocricetus_auratus
ENSCGRG00001022955	Swt1	98	76.159	ENSMICG00000014975	SWT1	100	76.159	Microcebus_murinus
ENSCGRG00001022955	Swt1	100	87.445	ENSMOCG00000009776	Swt1	100	87.445	Microtus_ochrogaster
ENSCGRG00001022955	Swt1	99	57.826	ENSMODG00000007472	SWT1	99	57.530	Monodelphis_domestica
ENSCGRG00001022955	Swt1	66	35.235	ENSMALG00000019308	swt1	60	35.235	Monopterus_albus
ENSCGRG00001022955	Swt1	99	80.328	MGP_CAROLIEiJ_G0014692	Swt1	100	88.043	Mus_caroli
ENSCGRG00001022955	Swt1	99	79.563	ENSMUSG00000052748	Swt1	99	85.870	Mus_musculus
ENSCGRG00001022955	Swt1	100	81.332	MGP_PahariEiJ_G0027928	Swt1	100	90.217	Mus_pahari
ENSCGRG00001022955	Swt1	99	79.891	MGP_SPRETEiJ_G0015499	Swt1	100	88.043	Mus_spretus
ENSCGRG00001022955	Swt1	98	71.650	ENSMPUG00000011913	SWT1	100	71.792	Mustela_putorius_furo
ENSCGRG00001022955	Swt1	99	70.562	ENSMLUG00000001142	SWT1	98	70.562	Myotis_lucifugus
ENSCGRG00001022955	Swt1	100	80.174	ENSNGAG00000021080	Swt1	100	79.826	Nannospalax_galili
ENSCGRG00001022955	Swt1	98	72.928	ENSNLEG00000018031	SWT1	99	72.818	Nomascus_leucogenys
ENSCGRG00001022955	Swt1	100	45.061	ENSMEUG00000000236	-	99	45.806	Notamacropus_eugenii
ENSCGRG00001022955	Swt1	88	66.587	ENSOPRG00000000692	SWT1	88	66.587	Ochotona_princeps
ENSCGRG00001022955	Swt1	63	35.401	ENSONIG00000009994	swt1	100	35.401	Oreochromis_niloticus
ENSCGRG00001022955	Swt1	83	56.522	ENSOANG00000001013	-	96	56.863	Ornithorhynchus_anatinus
ENSCGRG00001022955	Swt1	99	64.938	ENSOCUG00000004901	SWT1	99	65.502	Oryctolagus_cuniculus
ENSCGRG00001022955	Swt1	66	33.981	ENSORLG00000009682	swt1	62	33.981	Oryzias_latipes
ENSCGRG00001022955	Swt1	66	34.194	ENSORLG00020011654	swt1	62	34.194	Oryzias_latipes_hni
ENSCGRG00001022955	Swt1	66	33.819	ENSORLG00015007734	swt1	63	33.819	Oryzias_latipes_hsok
ENSCGRG00001022955	Swt1	74	33.714	ENSOMEG00000006607	swt1	68	33.714	Oryzias_melastigma
ENSCGRG00001022955	Swt1	100	71.665	ENSOGAG00000016195	SWT1	100	73.319	Otolemur_garnettii
ENSCGRG00001022955	Swt1	100	70.699	ENSOARG00000004156	SWT1	99	71.538	Ovis_aries
ENSCGRG00001022955	Swt1	98	73.260	ENSPPAG00000021400	SWT1	99	73.260	Pan_paniscus
ENSCGRG00001022955	Swt1	100	71.350	ENSPPRG00000023754	SWT1	100	73.481	Panthera_pardus
ENSCGRG00001022955	Swt1	100	71.460	ENSPTIG00000021889	SWT1	100	73.591	Panthera_tigris_altaica
ENSCGRG00001022955	Swt1	98	73.039	ENSPTRG00000001777	SWT1	99	73.039	Pan_troglodytes
ENSCGRG00001022955	Swt1	98	72.437	ENSPANG00000005099	SWT1	99	81.261	Papio_anubis
ENSCGRG00001022955	Swt1	69	35.188	ENSPKIG00000005979	swt1	63	35.188	Paramormyrops_kingsleyae
ENSCGRG00001022955	Swt1	74	52.011	ENSPSIG00000008961	SWT1	75	52.662	Pelodiscus_sinensis
ENSCGRG00001022955	Swt1	100	87.991	ENSPEMG00000008208	Swt1	100	87.991	Peromyscus_maniculatus_bairdii
ENSCGRG00001022955	Swt1	100	56.915	ENSPCIG00000002443	SWT1	99	75.573	Phascolarctos_cinereus
ENSCGRG00001022955	Swt1	65	34.163	ENSPFOG00000010988	-	69	34.167	Poecilia_formosa
ENSCGRG00001022955	Swt1	65	34.095	ENSPLAG00000022908	-	60	34.095	Poecilia_latipinna
ENSCGRG00001022955	Swt1	72	32.847	ENSPMEG00000006943	-	68	32.847	Poecilia_mexicana
ENSCGRG00001022955	Swt1	98	72.707	ENSPPYG00000000415	SWT1	99	73.179	Pongo_abelii
ENSCGRG00001022955	Swt1	98	60.419	ENSPCAG00000008337	SWT1	99	60.155	Procavia_capensis
ENSCGRG00001022955	Swt1	68	82.418	ENSPCOG00000018195	-	93	82.418	Propithecus_coquereli
ENSCGRG00001022955	Swt1	78	72.829	ENSPVAG00000005968	SWT1	79	73.061	Pteropus_vampyrus
ENSCGRG00001022955	Swt1	71	31.250	ENSPNYG00000012934	swt1	79	31.250	Pundamilia_nyererei
ENSCGRG00001022955	Swt1	74	35.336	ENSPNAG00000017795	swt1	70	34.497	Pygocentrus_nattereri
ENSCGRG00001022955	Swt1	100	84.296	ENSRNOG00000032258	Swt1	100	83.787	Rattus_norvegicus
ENSCGRG00001022955	Swt1	98	70.387	ENSRBIG00000040630	SWT1	99	79.281	Rhinopithecus_bieti
ENSCGRG00001022955	Swt1	66	70.261	ENSRROG00000028596	SWT1	100	69.340	Rhinopithecus_roxellana
ENSCGRG00001022955	Swt1	98	73.098	ENSSBOG00000028825	SWT1	99	73.098	Saimiri_boliviensis_boliviensis
ENSCGRG00001022955	Swt1	100	57.605	ENSSHAG00000009241	SWT1	99	58.324	Sarcophilus_harrisii
ENSCGRG00001022955	Swt1	65	40.175	ENSSFOG00015004895	swt1	57	39.825	Scleropages_formosus
ENSCGRG00001022955	Swt1	63	34.775	ENSSDUG00000012345	swt1	58	34.708	Seriola_dumerili
ENSCGRG00001022955	Swt1	63	34.256	ENSSLDG00000003821	swt1	58	34.192	Seriola_lalandi_dorsalis
ENSCGRG00001022955	Swt1	60	50.386	ENSSARG00000011524	-	99	50.386	Sorex_araneus
ENSCGRG00001022955	Swt1	94	42.503	ENSSPUG00000003899	SWT1	96	43.018	Sphenodon_punctatus
ENSCGRG00001022955	Swt1	63	33.901	ENSSPAG00000001030	swt1	58	33.560	Stegastes_partitus
ENSCGRG00001022955	Swt1	93	75.878	ENSSSCG00000015569	SWT1	100	74.419	Sus_scrofa
ENSCGRG00001022955	Swt1	64	53.501	ENSTGUG00000003718	-	100	53.501	Taeniopygia_guttata
ENSCGRG00001022955	Swt1	63	35.417	ENSTRUG00000006420	swt1	61	35.417	Takifugu_rubripes
ENSCGRG00001022955	Swt1	53	85.484	ENSTBEG00000016891	-	54	85.484	Tupaia_belangeri
ENSCGRG00001022955	Swt1	100	68.985	ENSTTRG00000005914	SWT1	100	70.861	Tursiops_truncatus
ENSCGRG00001022955	Swt1	100	69.103	ENSUAMG00000020937	SWT1	99	74.092	Ursus_americanus
ENSCGRG00001022955	Swt1	100	69.767	ENSUMAG00000021918	SWT1	100	72.093	Ursus_maritimus
ENSCGRG00001022955	Swt1	92	79.433	ENSVPAG00000011855	SWT1	92	79.433	Vicugna_pacos
ENSCGRG00001022955	Swt1	100	70.022	ENSVVUG00000009182	SWT1	100	72.456	Vulpes_vulpes
ENSCGRG00001022955	Swt1	65	33.555	ENSXMAG00000023472	-	60	33.555	Xiphophorus_maculatus