EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001023387 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 1593 bases
Position: chrscaffold_11:60843472-60845064
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001025924	RRM_5	PF13893.6	2.3e-06	1	1
ENSCGRP00001025924	RRM_1	PF00076.22	2.6e-43	1	2
ENSCGRP00001025924	RRM_1	PF00076.22	2.6e-43	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001030170	-	615	-	ENSCGRP00001025924	204 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001023387's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001023387's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001023387	-	77	33.333	ENSCGRG00001013417	Tia1	85	33.333
ENSCGRG00001023387	-	96	72.680	ENSCGRG00001007983	Pabpc6	59	75.138
ENSCGRG00001023387	-	84	33.987	ENSCGRG00001013676	Elavl1	94	33.987
ENSCGRG00001023387	-	77	33.333	ENSCGRG00001012762	Tial1	68	33.333
ENSCGRG00001023387	-	98	59.694	ENSCGRG00001002070	Pabpc4l	98	64.535
ENSCGRG00001023387	-	96	63.776	ENSCGRG00001021938	Pabpc1l	62	68.362
ENSCGRG00001023387	-	74	36.486	ENSCGRG00001018909	Rbm3	51	31.646
ENSCGRG00001023387	-	77	32.877	ENSCGRG00001019777	Celf3	54	32.877
ENSCGRG00001023387	-	96	73.846	ENSCGRG00001018166	Pabpc4	60	76.923
ENSCGRG00001023387	-	96	77.835	ENSCGRG00001022067	-	57	80.110

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001023387	-	98	92.462	ENSG00000184388	PABPC1L2B	99	92.462	Homo_sapiens
ENSCGRG00001023387	-	98	92.462	ENSG00000186288	PABPC1L2A	99	92.462	Homo_sapiens
ENSCGRG00001023387	-	96	77.436	ENSAPOG00000015105	pabpc1a	57	80.110	Acanthochromis_polyacanthus
ENSCGRG00001023387	-	96	77.320	ENSAPOG00000017776	pabpc1b	60	79.558	Acanthochromis_polyacanthus
ENSCGRG00001023387	-	98	92.965	ENSAMEG00000019441	-	99	92.965	Ailuropoda_melanoleuca
ENSCGRG00001023387	-	96	77.320	ENSACIG00000018366	pabpc1b	59	79.006	Amphilophus_citrinellus
ENSCGRG00001023387	-	96	77.436	ENSACIG00000004685	pabpc1a	57	80.110	Amphilophus_citrinellus
ENSCGRG00001023387	-	96	77.835	ENSAOCG00000011656	pabpc1a	57	80.110	Amphiprion_ocellaris
ENSCGRG00001023387	-	96	77.320	ENSAOCG00000019839	pabpc1b	58	79.558	Amphiprion_ocellaris
ENSCGRG00001023387	-	96	77.320	ENSAPEG00000010435	pabpc1b	58	79.558	Amphiprion_percula
ENSCGRG00001023387	-	96	77.835	ENSAPEG00000006963	pabpc1a	57	80.110	Amphiprion_percula
ENSCGRG00001023387	-	96	77.436	ENSATEG00000012917	pabpc1b	57	79.558	Anabas_testudineus
ENSCGRG00001023387	-	96	77.436	ENSATEG00000024852	pabpc1a	57	80.110	Anabas_testudineus
ENSCGRG00001023387	-	98	92.462	ENSANAG00000019429	-	99	92.462	Aotus_nancymaae
ENSCGRG00001023387	-	98	92.462	ENSANAG00000019431	-	99	92.462	Aotus_nancymaae
ENSCGRG00001023387	-	96	77.436	ENSACLG00000009399	pabpc1a	68	79.641	Astatotilapia_calliptera
ENSCGRG00001023387	-	96	76.804	ENSACLG00000014335	pabpc1b	58	79.006	Astatotilapia_calliptera
ENSCGRG00001023387	-	96	76.923	ENSAMXG00000008599	pabpc1b	58	79.558	Astyanax_mexicanus
ENSCGRG00001023387	-	98	93.467	ENSBTAG00000052491	-	93	93.939	Bos_taurus
ENSCGRG00001023387	-	98	93.970	ENSBTAG00000050902	-	95	93.970	Bos_taurus
ENSCGRG00001023387	-	98	92.462	ENSCJAG00000041326	-	99	92.462	Callithrix_jacchus
ENSCGRG00001023387	-	98	92.965	ENSCAFG00020002052	-	95	92.965	Canis_lupus_dingo
ENSCGRG00001023387	-	98	92.965	ENSCHIG00000011138	-	99	92.965	Capra_hircus
ENSCGRG00001023387	-	98	93.467	ENSCHIG00000006283	-	99	93.467	Capra_hircus
ENSCGRG00001023387	-	98	92.965	ENSTSYG00000001775	-	99	92.965	Carlito_syrichta
ENSCGRG00001023387	-	98	92.965	ENSCPOG00000009525	-	99	92.965	Cavia_porcellus
ENSCGRG00001023387	-	98	92.462	ENSCCAG00000031524	-	99	92.462	Cebus_capucinus
ENSCGRG00001023387	-	98	92.462	ENSCATG00000042826	-	99	92.462	Cercocebus_atys
ENSCGRG00001023387	-	98	92.462	ENSCATG00000043125	-	99	92.462	Cercocebus_atys
ENSCGRG00001023387	-	98	92.965	ENSCLAG00000017409	-	99	92.965	Chinchilla_lanigera
ENSCGRG00001023387	-	98	92.965	ENSCLAG00000017412	-	99	92.965	Chinchilla_lanigera
ENSCGRG00001023387	-	98	92.462	ENSCSAG00000000102	-	99	92.462	Chlorocebus_sabaeus
ENSCGRG00001023387	-	96	77.835	ENSCSEG00000013324	pabpc1a	58	80.110	Cynoglossus_semilaevis
ENSCGRG00001023387	-	96	76.410	ENSCSEG00000015241	-	58	79.006	Cynoglossus_semilaevis
ENSCGRG00001023387	-	96	78.351	ENSCVAG00000005489	pabpc1b	57	80.110	Cyprinodon_variegatus
ENSCGRG00001023387	-	96	77.436	ENSCVAG00000021872	pabpc1a	57	80.110	Cyprinodon_variegatus
ENSCGRG00001023387	-	96	77.436	ENSDARG00000017219	pabpc1a	58	79.670	Danio_rerio
ENSCGRG00001023387	-	96	76.804	ENSDARG00000021140	pabpc1b	92	83.471	Danio_rerio
ENSCGRG00001023387	-	98	90.955	ENSDNOG00000030926	-	99	90.955	Dasypus_novemcinctus
ENSCGRG00001023387	-	98	91.960	ENSDORG00000011362	-	99	91.960	Dipodomys_ordii
ENSCGRG00001023387	-	98	93.467	ENSEASG00005010399	-	95	93.467	Equus_asinus_asinus
ENSCGRG00001023387	-	98	93.467	ENSECAG00000002620	-	95	93.467	Equus_caballus
ENSCGRG00001023387	-	98	89.447	ENSEEUG00000008203	-	99	89.899	Erinaceus_europaeus
ENSCGRG00001023387	-	96	76.923	ENSELUG00000003614	pabpc1a	58	79.121	Esox_lucius
ENSCGRG00001023387	-	92	53.723	ENSELUG00000005389	-	75	55.801	Esox_lucius
ENSCGRG00001023387	-	96	77.436	ENSELUG00000015062	-	58	80.110	Esox_lucius
ENSCGRG00001023387	-	98	92.965	ENSFCAG00000039701	-	99	92.965	Felis_catus
ENSCGRG00001023387	-	98	92.965	ENSFDAG00000005484	-	99	92.965	Fukomys_damarensis
ENSCGRG00001023387	-	96	77.436	ENSFHEG00000018979	pabpc1a	57	80.110	Fundulus_heteroclitus
ENSCGRG00001023387	-	96	77.949	ENSFHEG00000008186	pabpc1b	58	80.110	Fundulus_heteroclitus
ENSCGRG00001023387	-	96	77.320	ENSGMOG00000002448	-	57	79.558	Gadus_morhua
ENSCGRG00001023387	-	96	76.923	ENSGMOG00000013448	pabpc1a	57	79.121	Gadus_morhua
ENSCGRG00001023387	-	96	78.351	ENSGAFG00000010193	pabpc1b	60	80.110	Gambusia_affinis
ENSCGRG00001023387	-	96	77.436	ENSGAFG00000019750	pabpc1a	61	79.670	Gambusia_affinis
ENSCGRG00001023387	-	96	76.410	ENSGACG00000003771	pabpc1b	64	79.121	Gasterosteus_aculeatus
ENSCGRG00001023387	-	96	77.835	ENSGACG00000003572	pabpc1a	57	80.110	Gasterosteus_aculeatus
ENSCGRG00001023387	-	98	92.462	ENSGGOG00000038606	-	99	92.462	Gorilla_gorilla
ENSCGRG00001023387	-	98	92.462	ENSGGOG00000043933	-	99	92.462	Gorilla_gorilla
ENSCGRG00001023387	-	96	76.804	ENSHBUG00000002075	pabpc1b	60	79.006	Haplochromis_burtoni
ENSCGRG00001023387	-	96	77.436	ENSHBUG00000020487	pabpc1a	68	79.641	Haplochromis_burtoni
ENSCGRG00001023387	-	98	91.960	ENSHGLG00000019762	-	99	91.960	Heterocephalus_glaber_female
ENSCGRG00001023387	-	98	91.960	ENSHGLG00000019668	-	99	91.960	Heterocephalus_glaber_female
ENSCGRG00001023387	-	98	91.960	ENSHGLG00100020854	-	99	91.960	Heterocephalus_glaber_male
ENSCGRG00001023387	-	96	66.489	ENSHCOG00000003175	pabpc1b	69	67.582	Hippocampus_comes
ENSCGRG00001023387	-	96	77.436	ENSHCOG00000013502	pabpc1a	57	80.110	Hippocampus_comes
ENSCGRG00001023387	-	96	77.835	ENSIPUG00000008848	pabpc1a	59	80.110	Ictalurus_punctatus
ENSCGRG00001023387	-	97	58.586	ENSIPUG00000021244	-	53	62.712	Ictalurus_punctatus
ENSCGRG00001023387	-	96	77.320	ENSIPUG00000010791	-	61	79.558	Ictalurus_punctatus
ENSCGRG00001023387	-	98	93.467	ENSSTOG00000022096	-	99	93.467	Ictidomys_tridecemlineatus
ENSCGRG00001023387	-	98	93.467	ENSSTOG00000026028	-	99	93.467	Ictidomys_tridecemlineatus
ENSCGRG00001023387	-	98	93.970	ENSJJAG00000007037	-	99	93.970	Jaculus_jaculus
ENSCGRG00001023387	-	96	77.436	ENSKMAG00000000605	pabpc1a	57	80.110	Kryptolebias_marmoratus
ENSCGRG00001023387	-	96	77.436	ENSKMAG00000008049	pabpc1b	63	79.121	Kryptolebias_marmoratus
ENSCGRG00001023387	-	96	77.320	ENSLBEG00000026845	pabpc1b	58	79.558	Labrus_bergylta
ENSCGRG00001023387	-	96	77.436	ENSLBEG00000024002	-	58	79.670	Labrus_bergylta
ENSCGRG00001023387	-	97	91.919	ENSLAFG00000023096	-	99	91.919	Loxodonta_africana
ENSCGRG00001023387	-	98	92.000	ENSMFAG00000028878	-	99	92.000	Macaca_fascicularis
ENSCGRG00001023387	-	98	92.462	ENSMMUG00000037681	-	99	92.462	Macaca_mulatta
ENSCGRG00001023387	-	98	92.462	ENSMMUG00000039929	-	99	92.462	Macaca_mulatta
ENSCGRG00001023387	-	98	92.462	ENSMMUG00000009740	-	99	92.462	Macaca_mulatta
ENSCGRG00001023387	-	98	92.462	ENSMNEG00000037732	-	99	92.462	Macaca_nemestrina
ENSCGRG00001023387	-	98	92.462	ENSMLEG00000027495	-	99	92.462	Mandrillus_leucophaeus
ENSCGRG00001023387	-	96	77.835	ENSMAMG00000014610	pabpc1b	59	79.558	Mastacembelus_armatus
ENSCGRG00001023387	-	96	77.436	ENSMAMG00000004502	-	68	79.641	Mastacembelus_armatus
ENSCGRG00001023387	-	96	76.804	ENSMZEG00005026745	pabpc1b	58	79.006	Maylandia_zebra
ENSCGRG00001023387	-	96	77.436	ENSMZEG00005025416	pabpc1a	68	79.641	Maylandia_zebra
ENSCGRG00001023387	-	98	93.467	ENSMICG00000047642	-	99	93.467	Microcebus_murinus
ENSCGRG00001023387	-	96	77.436	ENSMMOG00000018044	pabpc1a	68	79.641	Mola_mola
ENSCGRG00001023387	-	96	77.320	ENSMMOG00000018009	pabpc1b	61	79.558	Mola_mola
ENSCGRG00001023387	-	96	71.282	ENSMODG00000013156	-	57	74.176	Monodelphis_domestica
ENSCGRG00001023387	-	96	67.010	ENSMODG00000015024	-	57	69.613	Monodelphis_domestica
ENSCGRG00001023387	-	96	77.835	ENSMALG00000006066	pabpc1b	63	79.558	Monopterus_albus
ENSCGRG00001023387	-	96	77.436	ENSMALG00000013020	-	62	79.670	Monopterus_albus
ENSCGRG00001023387	-	98	94.975	ENSNGAG00000012688	-	99	94.975	Nannospalax_galili
ENSCGRG00001023387	-	96	76.410	ENSNBRG00000013737	pabpc1b	62	78.571	Neolamprologus_brichardi
ENSCGRG00001023387	-	96	77.436	ENSNBRG00000003068	-	68	79.641	Neolamprologus_brichardi
ENSCGRG00001023387	-	98	92.462	ENSNLEG00000018128	-	99	92.462	Nomascus_leucogenys
ENSCGRG00001023387	-	98	90.452	ENSODEG00000018540	-	99	90.452	Octodon_degus
ENSCGRG00001023387	-	96	77.436	ENSONIG00000006871	-	57	80.110	Oreochromis_niloticus
ENSCGRG00001023387	-	96	76.804	ENSONIG00000002717	pabpc1b	58	79.006	Oreochromis_niloticus
ENSCGRG00001023387	-	98	92.965	ENSOCUG00000002565	-	99	92.965	Oryctolagus_cuniculus
ENSCGRG00001023387	-	96	75.258	ENSORLG00000003008	-	58	77.348	Oryzias_latipes
ENSCGRG00001023387	-	96	77.436	ENSORLG00000002691	pabpc1a	68	79.641	Oryzias_latipes
ENSCGRG00001023387	-	96	75.258	ENSORLG00020022259	-	58	77.348	Oryzias_latipes_hni
ENSCGRG00001023387	-	96	77.436	ENSORLG00020022398	pabpc1a	57	80.110	Oryzias_latipes_hni
ENSCGRG00001023387	-	96	77.436	ENSORLG00015013633	pabpc1	57	80.110	Oryzias_latipes_hsok
ENSCGRG00001023387	-	96	75.258	ENSORLG00015010932	-	58	77.348	Oryzias_latipes_hsok
ENSCGRG00001023387	-	96	77.436	ENSOMEG00000020219	pabpc1a	57	80.110	Oryzias_melastigma
ENSCGRG00001023387	-	96	75.000	ENSOMEG00000013627	pabpc1b	67	77.844	Oryzias_melastigma
ENSCGRG00001023387	-	98	93.467	ENSOGAG00000029513	-	99	93.467	Otolemur_garnettii
ENSCGRG00001023387	-	98	93.467	ENSOGAG00000026047	-	99	93.467	Otolemur_garnettii
ENSCGRG00001023387	-	98	93.467	ENSOARG00000005943	-	99	93.467	Ovis_aries
ENSCGRG00001023387	-	98	92.462	ENSPPAG00000012920	-	99	92.462	Pan_paniscus
ENSCGRG00001023387	-	98	92.965	ENSPPRG00000011804	-	99	92.965	Panthera_pardus
ENSCGRG00001023387	-	98	92.965	ENSPPRG00000011809	-	99	92.965	Panthera_pardus
ENSCGRG00001023387	-	98	92.462	ENSPTRG00000028252	-	99	92.462	Pan_troglodytes
ENSCGRG00001023387	-	98	92.462	ENSPANG00000011549	-	99	92.462	Papio_anubis
ENSCGRG00001023387	-	96	77.320	ENSPKIG00000005676	pabpc1b	58	79.558	Paramormyrops_kingsleyae
ENSCGRG00001023387	-	96	76.410	ENSPMGG00000022487	pabpc1a	75	79.670	Periophthalmus_magnuspinnatus
ENSCGRG00001023387	-	96	77.436	ENSPMGG00000023134	-	79	79.121	Periophthalmus_magnuspinnatus
ENSCGRG00001023387	-	96	77.436	ENSPFOG00000005917	pabpc1b	58	79.558	Poecilia_formosa
ENSCGRG00001023387	-	96	77.436	ENSPFOG00000010815	pabpc1a	56	80.110	Poecilia_formosa
ENSCGRG00001023387	-	96	77.949	ENSPLAG00000001388	pabpc1b	58	80.110	Poecilia_latipinna
ENSCGRG00001023387	-	96	77.436	ENSPLAG00000004114	pabpc1a	57	80.110	Poecilia_latipinna
ENSCGRG00001023387	-	96	77.436	ENSPMEG00000014399	pabpc1b	58	79.558	Poecilia_mexicana
ENSCGRG00001023387	-	96	77.436	ENSPMEG00000001334	pabpc1a	57	80.110	Poecilia_mexicana
ENSCGRG00001023387	-	96	78.351	ENSPREG00000010911	pabpc1b	60	80.110	Poecilia_reticulata
ENSCGRG00001023387	-	96	77.436	ENSPREG00000019595	pabpc1a	92	83.471	Poecilia_reticulata
ENSCGRG00001023387	-	98	92.462	ENSPPYG00000020468	-	99	92.462	Pongo_abelii
ENSCGRG00001023387	-	98	91.960	ENSPCAG00000005308	-	99	91.960	Procavia_capensis
ENSCGRG00001023387	-	98	93.970	ENSPCOG00000026349	-	99	93.970	Propithecus_coquereli
ENSCGRG00001023387	-	98	91.457	ENSPVAG00000016117	-	99	91.457	Pteropus_vampyrus
ENSCGRG00001023387	-	96	76.804	ENSPNYG00000012578	pabpc1b	60	79.006	Pundamilia_nyererei
ENSCGRG00001023387	-	96	77.436	ENSPNYG00000005192	pabpc1a	61	79.641	Pundamilia_nyererei
ENSCGRG00001023387	-	96	77.436	ENSPNAG00000024626	pabpc1b	58	80.110	Pygocentrus_nattereri
ENSCGRG00001023387	-	96	76.410	ENSPNAG00000028408	pabpc1a	64	79.558	Pygocentrus_nattereri
ENSCGRG00001023387	-	98	92.462	ENSRBIG00000027173	-	99	92.462	Rhinopithecus_bieti
ENSCGRG00001023387	-	96	76.410	ENSRBIG00000028738	-	68	79.006	Rhinopithecus_bieti
ENSCGRG00001023387	-	98	92.462	ENSRROG00000017404	-	99	92.462	Rhinopithecus_roxellana
ENSCGRG00001023387	-	96	68.041	ENSSHAG00000000511	-	59	70.718	Sarcophilus_harrisii
ENSCGRG00001023387	-	85	68.208	ENSSFOG00015019668	-	67	68.605	Scleropages_formosus
ENSCGRG00001023387	-	96	77.835	ENSSFOG00015006662	pabpc1a	58	80.110	Scleropages_formosus
ENSCGRG00001023387	-	96	77.835	ENSSFOG00015002752	-	58	80.110	Scleropages_formosus
ENSCGRG00001023387	-	96	77.436	ENSSMAG00000010803	pabpc1a	58	79.670	Scophthalmus_maximus
ENSCGRG00001023387	-	96	77.436	ENSSMAG00000006869	pabpc1b	58	79.558	Scophthalmus_maximus
ENSCGRG00001023387	-	96	77.222	ENSSDUG00000011965	pabpc1b	58	79.121	Seriola_dumerili
ENSCGRG00001023387	-	96	77.436	ENSSDUG00000006675	pabpc1a	57	80.110	Seriola_dumerili
ENSCGRG00001023387	-	96	77.436	ENSSLDG00000011661	pabpc1a	57	80.110	Seriola_lalandi_dorsalis
ENSCGRG00001023387	-	96	76.923	ENSSLDG00000014156	pabpc1b	58	79.558	Seriola_lalandi_dorsalis
ENSCGRG00001023387	-	96	77.436	ENSSPAG00000014453	-	57	80.110	Stegastes_partitus
ENSCGRG00001023387	-	96	77.320	ENSSPAG00000019265	pabpc1b	63	79.558	Stegastes_partitus
ENSCGRG00001023387	-	98	92.965	ENSSSCG00000036336	-	99	92.965	Sus_scrofa
ENSCGRG00001023387	-	98	92.965	ENSSSCG00000032167	-	99	92.965	Sus_scrofa
ENSCGRG00001023387	-	96	77.436	ENSTRUG00000003767	-	59	80.110	Takifugu_rubripes
ENSCGRG00001023387	-	96	77.436	ENSTRUG00000011577	-	57	80.110	Takifugu_rubripes
ENSCGRG00001023387	-	96	73.632	ENSTNIG00000013307	pabpc1a	58	75.936	Tetraodon_nigroviridis
ENSCGRG00001023387	-	96	78.351	ENSTNIG00000009153	pabpc1b	57	80.663	Tetraodon_nigroviridis
ENSCGRG00001023387	-	98	92.965	ENSTTRG00000013181	-	99	92.965	Tursiops_truncatus
ENSCGRG00001023387	-	98	92.965	ENSUAMG00000008089	-	99	92.965	Ursus_americanus
ENSCGRG00001023387	-	98	58.376	ENSUMAG00000023926	-	88	59.563	Ursus_maritimus
ENSCGRG00001023387	-	98	92.965	ENSUMAG00000003364	-	99	92.965	Ursus_maritimus
ENSCGRG00001023387	-	98	92.462	ENSVVUG00000015892	-	97	92.462	Vulpes_vulpes
ENSCGRG00001023387	-	96	78.351	ENSXCOG00000019901	pabpc1b	60	80.110	Xiphophorus_couchianus
ENSCGRG00001023387	-	96	77.436	ENSXCOG00000017066	pabpc1a	61	79.670	Xiphophorus_couchianus
ENSCGRG00001023387	-	96	77.436	ENSXMAG00000002555	pabpc1a	60	79.670	Xiphophorus_maculatus
ENSCGRG00001023387	-	96	77.949	ENSXMAG00000003753	pabpc1b	88	80.110	Xiphophorus_maculatus