EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001023665 (Gene tree)
Gene ID: -
Gene Symbol: Prpf18
Alias: 2810441A10Rik
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 36382 bases
Position: chrscaffold_6:15982156-16018537
Accession: 100750534
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001026305	PRP4	PF08799.11	9.7e-14	1	1
ENSCGRP00001026305	Prp18	PF02840.15	5.1e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001030551	-	3247	XM_003496413	ENSCGRP00001026305	342 (aa)	XP_003496461	G3GVR0

Gene Model

Click here to download ENSCGRG00001023665's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001023665's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001023665	Prpf18	100	99.415	ENSG00000165630	PRPF18	100	99.415	Homo_sapiens
ENSCGRG00001023665	Prpf18	100	85.088	ENSAPOG00000024177	prpf18	100	85.088	Acanthochromis_polyacanthus
ENSCGRG00001023665	Prpf18	100	98.830	ENSAMEG00000013591	-	100	98.830	Ailuropoda_melanoleuca
ENSCGRG00001023665	Prpf18	100	84.503	ENSACIG00000001186	prpf18	100	84.503	Amphilophus_citrinellus
ENSCGRG00001023665	Prpf18	98	85.075	ENSAOCG00000006572	prpf18	94	83.041	Amphiprion_ocellaris
ENSCGRG00001023665	Prpf18	100	85.380	ENSAPEG00000004564	prpf18	100	85.380	Amphiprion_percula
ENSCGRG00001023665	Prpf18	100	83.918	ENSATEG00000000303	prpf18	100	83.918	Anabas_testudineus
ENSCGRG00001023665	Prpf18	99	91.471	ENSAPLG00000003387	-	99	91.471	Anas_platyrhynchos
ENSCGRG00001023665	Prpf18	100	91.279	ENSACAG00000000818	-	100	91.279	Anolis_carolinensis
ENSCGRG00001023665	Prpf18	100	98.830	ENSANAG00000037445	-	100	98.830	Aotus_nancymaae
ENSCGRG00001023665	Prpf18	100	84.503	ENSACLG00000026296	prpf18	100	84.503	Astatotilapia_calliptera
ENSCGRG00001023665	Prpf18	100	84.286	ENSAMXG00000012848	prpf18	100	84.286	Astyanax_mexicanus
ENSCGRG00001023665	Prpf18	100	98.538	ENSBTAG00000017244	PRPF18	100	98.538	Bos_taurus
ENSCGRG00001023665	Prpf18	98	39.080	WBGene00009320	F32B6.3	97	39.080	Caenorhabditis_elegans
ENSCGRG00001023665	Prpf18	100	98.830	ENSCJAG00000009432	-	100	98.830	Callithrix_jacchus
ENSCGRG00001023665	Prpf18	100	98.830	ENSCAFG00000004735	-	100	98.830	Canis_familiaris
ENSCGRG00001023665	Prpf18	100	98.830	ENSCAFG00020007712	-	100	98.830	Canis_lupus_dingo
ENSCGRG00001023665	Prpf18	100	98.538	ENSCHIG00000000499	-	100	98.538	Capra_hircus
ENSCGRG00001023665	Prpf18	100	98.538	ENSTSYG00000003517	-	100	98.538	Carlito_syrichta
ENSCGRG00001023665	Prpf18	100	99.415	ENSCPOG00000021069	-	100	99.415	Cavia_porcellus
ENSCGRG00001023665	Prpf18	100	98.830	ENSCCAG00000036822	-	100	98.830	Cebus_capucinus
ENSCGRG00001023665	Prpf18	100	88.304	ENSCATG00000016633	-	100	88.304	Cercocebus_atys
ENSCGRG00001023665	Prpf18	100	98.830	ENSCLAG00000011770	-	100	98.830	Chinchilla_lanigera
ENSCGRG00001023665	Prpf18	100	96.866	ENSCSAG00000013109	-	100	96.866	Chlorocebus_sabaeus
ENSCGRG00001023665	Prpf18	100	89.326	ENSCPBG00000003100	-	100	89.888	Chrysemys_picta_bellii
ENSCGRG00001023665	Prpf18	99	54.706	ENSCING00000020481	-	97	54.706	Ciona_intestinalis
ENSCGRG00001023665	Prpf18	99	54.624	ENSCSAVG00000010546	-	99	54.467	Ciona_savignyi
ENSCGRG00001023665	Prpf18	100	99.123	ENSCANG00000034900	-	100	99.123	Colobus_angolensis_palliatus
ENSCGRG00001023665	Prpf18	100	100.000	ENSCGRG00000014690	Prpf18	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001023665	Prpf18	100	82.749	ENSCSEG00000005536	prpf18	99	82.749	Cynoglossus_semilaevis
ENSCGRG00001023665	Prpf18	100	83.918	ENSCVAG00000012401	prpf18	100	83.918	Cyprinodon_variegatus
ENSCGRG00001023665	Prpf18	100	84.795	ENSDARG00000058306	prpf18	100	84.795	Danio_rerio
ENSCGRG00001023665	Prpf18	100	98.246	ENSDNOG00000035607	-	100	98.246	Dasypus_novemcinctus
ENSCGRG00001023665	Prpf18	100	98.538	ENSDORG00000000858	Prpf18	100	98.538	Dipodomys_ordii
ENSCGRG00001023665	Prpf18	99	51.327	FBgn0027784	Prp18	98	51.032	Drosophila_melanogaster
ENSCGRG00001023665	Prpf18	100	87.135	ENSETEG00000015060	-	100	87.135	Echinops_telfairi
ENSCGRG00001023665	Prpf18	100	66.571	ENSEBUG00000016502	prpf18	99	65.706	Eptatretus_burgeri
ENSCGRG00001023665	Prpf18	100	99.123	ENSEASG00005019373	-	100	99.123	Equus_asinus_asinus
ENSCGRG00001023665	Prpf18	100	99.123	ENSECAG00000006997	PRPF18	100	99.123	Equus_caballus
ENSCGRG00001023665	Prpf18	92	62.658	ENSEEUG00000001171	-	100	62.658	Erinaceus_europaeus
ENSCGRG00001023665	Prpf18	100	82.216	ENSELUG00000022190	prpf18	100	82.216	Esox_lucius
ENSCGRG00001023665	Prpf18	100	98.538	ENSFCAG00000004436	-	100	98.538	Felis_catus
ENSCGRG00001023665	Prpf18	92	89.231	ENSFALG00000001912	-	97	89.231	Ficedula_albicollis
ENSCGRG00001023665	Prpf18	99	64.058	ENSFDAG00000010713	-	97	64.058	Fukomys_damarensis
ENSCGRG00001023665	Prpf18	94	98.750	ENSFDAG00000014026	-	100	98.750	Fukomys_damarensis
ENSCGRG00001023665	Prpf18	80	89.377	ENSFHEG00000020125	prpf18	98	89.513	Fundulus_heteroclitus
ENSCGRG00001023665	Prpf18	99	80.059	ENSGMOG00000012210	prpf18	99	80.059	Gadus_morhua
ENSCGRG00001023665	Prpf18	100	92.398	ENSGALG00000043593	-	100	92.398	Gallus_gallus
ENSCGRG00001023665	Prpf18	100	83.041	ENSGAFG00000006034	prpf18	100	83.041	Gambusia_affinis
ENSCGRG00001023665	Prpf18	100	81.871	ENSGACG00000012232	prpf18	100	81.871	Gasterosteus_aculeatus
ENSCGRG00001023665	Prpf18	100	92.982	ENSGAGG00000016878	-	100	92.982	Gopherus_agassizii
ENSCGRG00001023665	Prpf18	92	99.367	ENSGGOG00000025188	-	96	99.367	Gorilla_gorilla
ENSCGRG00001023665	Prpf18	100	84.503	ENSHBUG00000010264	prpf18	100	84.503	Haplochromis_burtoni
ENSCGRG00001023665	Prpf18	100	98.830	ENSHGLG00000018534	PRPF18	100	98.830	Heterocephalus_glaber_female
ENSCGRG00001023665	Prpf18	94	99.062	ENSHGLG00100012161	-	98	99.062	Heterocephalus_glaber_male
ENSCGRG00001023665	Prpf18	100	83.918	ENSHCOG00000015987	prpf18	100	83.918	Hippocampus_comes
ENSCGRG00001023665	Prpf18	100	81.870	ENSIPUG00000007432	prpf18	100	82.436	Ictalurus_punctatus
ENSCGRG00001023665	Prpf18	100	97.661	ENSSTOG00000008735	-	100	97.661	Ictidomys_tridecemlineatus
ENSCGRG00001023665	Prpf18	100	72.046	ENSJJAG00000015191	-	100	72.046	Jaculus_jaculus
ENSCGRG00001023665	Prpf18	100	99.415	ENSJJAG00000024041	-	100	99.415	Jaculus_jaculus
ENSCGRG00001023665	Prpf18	100	82.749	ENSKMAG00000012124	prpf18	100	82.749	Kryptolebias_marmoratus
ENSCGRG00001023665	Prpf18	99	83.136	ENSLBEG00000028466	prpf18	99	83.136	Labrus_bergylta
ENSCGRG00001023665	Prpf18	100	86.550	ENSLACG00000009885	prpf18	100	86.550	Latimeria_chalumnae
ENSCGRG00001023665	Prpf18	100	90.936	ENSLOCG00000016736	prpf18	100	90.936	Lepisosteus_oculatus
ENSCGRG00001023665	Prpf18	100	99.415	ENSLAFG00000007753	-	100	99.415	Loxodonta_africana
ENSCGRG00001023665	Prpf18	100	99.415	ENSMFAG00000000540	-	100	99.415	Macaca_fascicularis
ENSCGRG00001023665	Prpf18	100	99.415	ENSMMUG00000015071	PRPF18	100	99.415	Macaca_mulatta
ENSCGRG00001023665	Prpf18	100	99.415	ENSMNEG00000024679	-	100	99.415	Macaca_nemestrina
ENSCGRG00001023665	Prpf18	100	84.211	ENSMLEG00000031715	-	100	84.211	Mandrillus_leucophaeus
ENSCGRG00001023665	Prpf18	100	83.041	ENSMAMG00000006610	prpf18	100	83.041	Mastacembelus_armatus
ENSCGRG00001023665	Prpf18	100	84.503	ENSMZEG00005019392	prpf18	100	84.503	Maylandia_zebra
ENSCGRG00001023665	Prpf18	100	92.398	ENSMGAG00000005023	-	100	92.398	Meleagris_gallopavo
ENSCGRG00001023665	Prpf18	100	99.123	ENSMICG00000006572	-	100	99.123	Microcebus_murinus
ENSCGRG00001023665	Prpf18	100	99.415	ENSMOCG00000021468	Prpf18	100	99.415	Microtus_ochrogaster
ENSCGRG00001023665	Prpf18	100	83.626	ENSMMOG00000013012	prpf18	100	83.626	Mola_mola
ENSCGRG00001023665	Prpf18	100	85.965	ENSMODG00000024043	-	100	85.965	Monodelphis_domestica
ENSCGRG00001023665	Prpf18	96	91.124	ENSMODG00000016902	-	92	91.124	Monodelphis_domestica
ENSCGRG00001023665	Prpf18	100	77.937	ENSMALG00000005486	prpf18	100	78.223	Monopterus_albus
ENSCGRG00001023665	Prpf18	100	99.415	MGP_CAROLIEiJ_G0023143	Prpf18	100	100.000	Mus_caroli
ENSCGRG00001023665	Prpf18	100	99.123	ENSMUSG00000039449	Prpf18	100	100.000	Mus_musculus
ENSCGRG00001023665	Prpf18	100	99.123	MGP_PahariEiJ_G0019203	Prpf18	100	100.000	Mus_pahari
ENSCGRG00001023665	Prpf18	100	98.830	MGP_SPRETEiJ_G0024061	Prpf18	100	100.000	Mus_spretus
ENSCGRG00001023665	Prpf18	100	98.538	ENSMPUG00000000938	-	100	98.538	Mustela_putorius_furo
ENSCGRG00001023665	Prpf18	100	99.123	ENSMLUG00000009200	-	100	99.123	Myotis_lucifugus
ENSCGRG00001023665	Prpf18	100	98.830	ENSNGAG00000012500	-	100	98.830	Nannospalax_galili
ENSCGRG00001023665	Prpf18	67	92.174	ENSNGAG00000023550	-	82	92.174	Nannospalax_galili
ENSCGRG00001023665	Prpf18	100	84.503	ENSNBRG00000001778	prpf18	100	84.503	Neolamprologus_brichardi
ENSCGRG00001023665	Prpf18	100	99.415	ENSNLEG00000012186	-	100	99.415	Nomascus_leucogenys
ENSCGRG00001023665	Prpf18	100	65.497	ENSMEUG00000005032	-	100	65.497	Notamacropus_eugenii
ENSCGRG00001023665	Prpf18	77	80.755	ENSOPRG00000002153	-	100	80.755	Ochotona_princeps
ENSCGRG00001023665	Prpf18	100	98.538	ENSODEG00000003770	-	100	98.538	Octodon_degus
ENSCGRG00001023665	Prpf18	98	83.881	ENSONIG00000014854	prpf18	96	83.881	Oreochromis_niloticus
ENSCGRG00001023665	Prpf18	100	94.737	ENSOANG00000015404	-	100	94.737	Ornithorhynchus_anatinus
ENSCGRG00001023665	Prpf18	100	99.123	ENSOCUG00000027756	-	100	95.029	Oryctolagus_cuniculus
ENSCGRG00001023665	Prpf18	100	82.906	ENSORLG00000010293	prpf18	100	82.906	Oryzias_latipes
ENSCGRG00001023665	Prpf18	100	84.503	ENSORLG00020001530	prpf18	100	84.503	Oryzias_latipes_hni
ENSCGRG00001023665	Prpf18	100	84.211	ENSORLG00015013705	prpf18	100	84.211	Oryzias_latipes_hsok
ENSCGRG00001023665	Prpf18	100	85.088	ENSOMEG00000009167	prpf18	100	85.088	Oryzias_melastigma
ENSCGRG00001023665	Prpf18	100	98.246	ENSOGAG00000007294	-	100	98.246	Otolemur_garnettii
ENSCGRG00001023665	Prpf18	100	96.011	ENSOARG00000006243	-	100	96.011	Ovis_aries
ENSCGRG00001023665	Prpf18	100	99.415	ENSPPAG00000041959	-	100	99.415	Pan_paniscus
ENSCGRG00001023665	Prpf18	100	98.538	ENSPPRG00000000107	-	100	98.538	Panthera_pardus
ENSCGRG00001023665	Prpf18	100	98.246	ENSPTIG00000021094	-	100	98.246	Panthera_tigris_altaica
ENSCGRG00001023665	Prpf18	100	99.415	ENSPTRG00000002306	PRPF18	100	99.415	Pan_troglodytes
ENSCGRG00001023665	Prpf18	100	99.123	ENSPANG00000023346	-	100	99.123	Papio_anubis
ENSCGRG00001023665	Prpf18	86	98.113	ENSPKIG00000014128	prpf18	96	82.336	Paramormyrops_kingsleyae
ENSCGRG00001023665	Prpf18	100	92.982	ENSPSIG00000016064	-	100	92.982	Pelodiscus_sinensis
ENSCGRG00001023665	Prpf18	100	78.655	ENSPMGG00000016486	prpf18	100	78.655	Periophthalmus_magnuspinnatus
ENSCGRG00001023665	Prpf18	100	99.708	ENSPEMG00000013704	Prpf18	100	99.708	Peromyscus_maniculatus_bairdii
ENSCGRG00001023665	Prpf18	100	74.277	ENSPMAG00000000204	prpf18	100	74.277	Petromyzon_marinus
ENSCGRG00001023665	Prpf18	92	96.835	ENSPCIG00000012963	-	99	96.835	Phascolarctos_cinereus
ENSCGRG00001023665	Prpf18	100	82.000	ENSPFOG00000017611	prpf18	100	82.000	Poecilia_formosa
ENSCGRG00001023665	Prpf18	100	83.333	ENSPLAG00000000369	prpf18	100	83.333	Poecilia_latipinna
ENSCGRG00001023665	Prpf18	100	83.333	ENSPMEG00000005183	prpf18	100	83.333	Poecilia_mexicana
ENSCGRG00001023665	Prpf18	100	82.749	ENSPREG00000015232	prpf18	100	82.749	Poecilia_reticulata
ENSCGRG00001023665	Prpf18	100	99.123	ENSPPYG00000002101	PRPF18	100	99.123	Pongo_abelii
ENSCGRG00001023665	Prpf18	100	80.409	ENSPCAG00000010833	-	100	80.409	Procavia_capensis
ENSCGRG00001023665	Prpf18	100	91.813	ENSPCOG00000013057	-	100	91.813	Propithecus_coquereli
ENSCGRG00001023665	Prpf18	100	60.819	ENSPVAG00000002947	-	100	60.819	Pteropus_vampyrus
ENSCGRG00001023665	Prpf18	100	84.503	ENSPNYG00000003554	prpf18	100	84.503	Pundamilia_nyererei
ENSCGRG00001023665	Prpf18	100	85.470	ENSPNAG00000023151	prpf18	100	85.470	Pygocentrus_nattereri
ENSCGRG00001023665	Prpf18	100	99.415	ENSRNOG00000018396	Prpf18	100	99.415	Rattus_norvegicus
ENSCGRG00001023665	Prpf18	100	98.830	ENSRBIG00000028028	-	100	98.830	Rhinopithecus_bieti
ENSCGRG00001023665	Prpf18	100	99.123	ENSRROG00000040695	-	100	99.123	Rhinopithecus_roxellana
ENSCGRG00001023665	Prpf18	100	98.830	ENSSBOG00000034482	-	100	98.830	Saimiri_boliviensis_boliviensis
ENSCGRG00001023665	Prpf18	100	96.784	ENSSHAG00000016463	-	100	96.784	Sarcophilus_harrisii
ENSCGRG00001023665	Prpf18	100	77.193	ENSSHAG00000009669	-	100	77.193	Sarcophilus_harrisii
ENSCGRG00001023665	Prpf18	98	81.739	ENSSFOG00015022118	prpf18	100	76.945	Scleropages_formosus
ENSCGRG00001023665	Prpf18	77	44.528	ENSSFOG00015021154	-	89	48.927	Scleropages_formosus
ENSCGRG00001023665	Prpf18	100	82.749	ENSSMAG00000005308	prpf18	100	82.749	Scophthalmus_maximus
ENSCGRG00001023665	Prpf18	100	84.795	ENSSDUG00000015428	prpf18	100	84.795	Seriola_dumerili
ENSCGRG00001023665	Prpf18	100	84.795	ENSSLDG00000023989	prpf18	100	84.795	Seriola_lalandi_dorsalis
ENSCGRG00001023665	Prpf18	100	68.421	ENSSARG00000005307	-	100	68.421	Sorex_araneus
ENSCGRG00001023665	Prpf18	100	92.690	ENSSPUG00000002619	-	100	92.690	Sphenodon_punctatus
ENSCGRG00001023665	Prpf18	100	84.211	ENSSPAG00000019502	prpf18	100	84.211	Stegastes_partitus
ENSCGRG00001023665	Prpf18	100	98.830	ENSSSCG00000026354	-	100	98.830	Sus_scrofa
ENSCGRG00001023665	Prpf18	100	92.398	ENSTGUG00000002286	-	100	92.398	Taeniopygia_guttata
ENSCGRG00001023665	Prpf18	100	82.164	ENSTRUG00000011278	prpf18	100	82.164	Takifugu_rubripes
ENSCGRG00001023665	Prpf18	100	81.871	ENSTNIG00000000911	prpf18	100	81.871	Tetraodon_nigroviridis
ENSCGRG00001023665	Prpf18	79	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSCGRG00001023665	Prpf18	100	99.123	ENSTTRG00000011117	PRPF18	100	99.123	Tursiops_truncatus
ENSCGRG00001023665	Prpf18	95	95.692	ENSUAMG00000001815	-	94	95.692	Ursus_americanus
ENSCGRG00001023665	Prpf18	100	93.860	ENSUMAG00000012329	-	100	93.860	Ursus_maritimus
ENSCGRG00001023665	Prpf18	100	93.275	ENSVPAG00000011486	-	100	93.275	Vicugna_pacos
ENSCGRG00001023665	Prpf18	100	98.830	ENSVVUG00000005453	-	100	98.830	Vulpes_vulpes
ENSCGRG00001023665	Prpf18	100	80.580	ENSXETG00000024057	prpf18	100	80.580	Xenopus_tropicalis
ENSCGRG00001023665	Prpf18	100	82.558	ENSXCOG00000020414	prpf18	100	82.558	Xiphophorus_couchianus
ENSCGRG00001023665	Prpf18	100	83.041	ENSXMAG00000004713	prpf18	91	83.041	Xiphophorus_maculatus