EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001023858 (Gene tree)
Gene ID: -
Gene Symbol: Zfp560
Alias: 2310030G09Rik
Full Name: zinc finger protein 560
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 6694 bases
Position: chrscaffold_30:1531946-1538639
Accession: 1915280
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001026585	zf-C2H2	PF00096.26	2.9e-84	1	15
ENSCGRP00001026585	zf-C2H2	PF00096.26	2.9e-84	2	15
ENSCGRP00001026585	zf-C2H2	PF00096.26	2.9e-84	3	15
ENSCGRP00001026585	zf-C2H2	PF00096.26	2.9e-84	4	15
ENSCGRP00001026585	zf-C2H2	PF00096.26	2.9e-84	5	15
ENSCGRP00001026585	zf-C2H2	PF00096.26	2.9e-84	6	15
ENSCGRP00001026585	zf-C2H2	PF00096.26	2.9e-84	7	15
ENSCGRP00001026585	zf-C2H2	PF00096.26	2.9e-84	8	15
ENSCGRP00001026585	zf-C2H2	PF00096.26	2.9e-84	9	15
ENSCGRP00001026585	zf-C2H2	PF00096.26	2.9e-84	10	15
ENSCGRP00001026585	zf-C2H2	PF00096.26	2.9e-84	11	15
ENSCGRP00001026585	zf-C2H2	PF00096.26	2.9e-84	12	15
ENSCGRP00001026585	zf-C2H2	PF00096.26	2.9e-84	13	15
ENSCGRP00001026585	zf-C2H2	PF00096.26	2.9e-84	14	15
ENSCGRP00001026585	zf-C2H2	PF00096.26	2.9e-84	15	15
ENSCGRP00001026585	zf-met	PF12874.7	7.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001030831	-	2262	-	ENSCGRP00001026585	753 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001023858's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001023858's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001023858	Zfp560	70	46.512	ENSCGRG00001004047	-	80	46.512
ENSCGRG00001023858	Zfp560	68	51.667	ENSCGRG00001019143	-	77	51.667
ENSCGRG00001023858	Zfp560	66	51.014	ENSCGRG00001012640	Zfp94	81	51.014
ENSCGRG00001023858	Zfp560	69	36.923	ENSCGRG00001015855	Zbtb41	51	35.809
ENSCGRG00001023858	Zfp560	73	53.012	ENSCGRG00001007115	-	96	53.012
ENSCGRG00001023858	Zfp560	95	60.612	ENSCGRG00001000576	Zfp26	90	60.612
ENSCGRG00001023858	Zfp560	83	47.253	ENSCGRG00001012523	-	99	47.253
ENSCGRG00001023858	Zfp560	65	53.430	ENSCGRG00001013561	Zfp768	60	53.381
ENSCGRG00001023858	Zfp560	82	40.141	ENSCGRG00001012398	Zfp236	81	40.141
ENSCGRG00001023858	Zfp560	91	53.913	ENSCGRG00001013939	Zfp454	99	53.913
ENSCGRG00001023858	Zfp560	90	49.157	ENSCGRG00001024630	-	96	49.157
ENSCGRG00001023858	Zfp560	76	52.044	ENSCGRG00001017579	Zfp112	69	52.044
ENSCGRG00001023858	Zfp560	68	43.237	ENSCGRG00001013602	-	98	44.118
ENSCGRG00001023858	Zfp560	91	52.594	ENSCGRG00001021088	Zfp354a	99	52.594
ENSCGRG00001023858	Zfp560	59	44.000	ENSCGRG00001005125	Wt1	53	42.718
ENSCGRG00001023858	Zfp560	64	52.113	ENSCGRG00001010581	Prdm5	68	52.113
ENSCGRG00001023858	Zfp560	67	46.053	ENSCGRG00001011389	Snai3	53	46.053
ENSCGRG00001023858	Zfp560	63	44.048	ENSCGRG00001015432	Gfi1	53	44.048
ENSCGRG00001023858	Zfp560	69	51.613	ENSCGRG00001015424	-	82	51.613
ENSCGRG00001023858	Zfp560	89	52.632	ENSCGRG00001012803	-	94	52.632
ENSCGRG00001023858	Zfp560	97	52.402	ENSCGRG00001006591	Zkscan3	64	52.402
ENSCGRG00001023858	Zfp560	90	45.155	ENSCGRG00001001639	Zfp882	99	45.155
ENSCGRG00001023858	Zfp560	60	31.004	ENSCGRG00001004071	Patz1	60	31.206
ENSCGRG00001023858	Zfp560	61	44.762	ENSCGRG00001007749	Snai1	81	44.762
ENSCGRG00001023858	Zfp560	65	46.667	ENSCGRG00001013598	Zfp865	81	33.206
ENSCGRG00001023858	Zfp560	73	41.935	ENSCGRG00001018100	Zfp202	56	43.137
ENSCGRG00001023858	Zfp560	95	43.284	ENSCGRG00001023314	-	62	43.284
ENSCGRG00001023858	Zfp560	68	50.262	ENSCGRG00001019468	Zfp628	63	47.826
ENSCGRG00001023858	Zfp560	90	45.886	ENSCGRG00001010752	2610008E11Rik	95	47.706
ENSCGRG00001023858	Zfp560	66	36.667	ENSCGRG00001009557	Zfp319	93	36.681
ENSCGRG00001023858	Zfp560	58	43.284	ENSCGRG00001013674	Snai2	52	43.284
ENSCGRG00001023858	Zfp560	70	34.545	ENSCGRG00001001429	Zfp574	94	37.056
ENSCGRG00001023858	Zfp560	67	51.417	ENSCGRG00001013367	Zfp61	75	51.417
ENSCGRG00001023858	Zfp560	65	57.143	ENSCGRG00001019569	Sall4	55	43.636
ENSCGRG00001023858	Zfp560	69	53.774	ENSCGRG00001024303	-	99	53.774
ENSCGRG00001023858	Zfp560	57	43.210	ENSCGRG00001013279	Zfp784	73	42.857
ENSCGRG00001023858	Zfp560	90	48.188	ENSCGRG00001010967	Zfp1	99	48.188
ENSCGRG00001023858	Zfp560	67	42.891	ENSCGRG00001002297	-	97	42.891
ENSCGRG00001023858	Zfp560	64	37.838	ENSCGRG00001008879	Maz	61	35.323
ENSCGRG00001023858	Zfp560	87	41.398	ENSCGRG00001002406	Zfp39	91	41.398
ENSCGRG00001023858	Zfp560	66	34.879	ENSCGRG00001017330	Repin1	84	34.879
ENSCGRG00001023858	Zfp560	93	48.498	ENSCGRG00001011966	Zfp715	100	47.899
ENSCGRG00001023858	Zfp560	66	45.133	ENSCGRG00001019408	Zbtb17	55	45.133
ENSCGRG00001023858	Zfp560	89	52.734	ENSCGRG00001020646	Gm3854	96	52.734
ENSCGRG00001023858	Zfp560	90	44.652	ENSCGRG00001007163	-	99	60.526

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001023858	Zfp560	72	87.861	ENSCPOG00000033345	-	99	87.861	Cavia_porcellus
ENSCGRG00001023858	Zfp560	100	100.000	ENSCGRG00000012088	Zfp560	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001023858	Zfp560	72	88.696	ENSFDAG00000008687	-	99	88.696	Fukomys_damarensis
ENSCGRG00001023858	Zfp560	89	79.080	ENSHGLG00000019054	-	99	88.696	Heterocephalus_glaber_female
ENSCGRG00001023858	Zfp560	89	79.080	ENSHGLG00100015134	-	98	79.080	Heterocephalus_glaber_male
ENSCGRG00001023858	Zfp560	89	78.539	ENSSTOG00000033893	-	98	78.539	Ictidomys_tridecemlineatus
ENSCGRG00001023858	Zfp560	100	77.834	ENSMOCG00000007908	Zfp560	100	74.904	Microtus_ochrogaster
ENSCGRG00001023858	Zfp560	99	80.026	ENSNGAG00000015897	Zfp560	99	80.026	Nannospalax_galili
ENSCGRG00001023858	Zfp560	72	89.244	ENSODEG00000017047	-	99	89.244	Octodon_degus
ENSCGRG00001023858	Zfp560	74	77.046	ENSOCUG00000029594	-	99	77.046	Oryctolagus_cuniculus
ENSCGRG00001023858	Zfp560	77	53.963	ENSOGAG00000025131	ZNF121	99	50.765	Otolemur_garnettii
ENSCGRG00001023858	Zfp560	85	86.625	ENSRNOG00000048394	Zfp560	99	86.625	Rattus_norvegicus