EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001023942 (Gene tree)
Gene ID: -
Gene Symbol: Tsr1
Alias: -
Full Name: TSR1 20S rRNA accumulation
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 12814 bases
Position: chrscaffold_4:87664490-87677303
Accession: 2144566
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001026702	AARP2CN	PF08142.12	2.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001030948	-	4564	-	ENSCGRP00001026702	803 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001023942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001023942's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001023942	Tsr1	100	85.697	ENSG00000167721	TSR1	100	85.199	Homo_sapiens
ENSCGRG00001023942	Tsr1	99	54.384	ENSAPOG00000020891	tsr1	99	54.436	Acanthochromis_polyacanthus
ENSCGRG00001023942	Tsr1	100	84.540	ENSAMEG00000007599	TSR1	99	83.067	Ailuropoda_melanoleuca
ENSCGRG00001023942	Tsr1	99	55.802	ENSACIG00000007090	tsr1	99	55.556	Amphilophus_citrinellus
ENSCGRG00001023942	Tsr1	99	54.142	ENSAOCG00000023284	tsr1	99	53.735	Amphiprion_ocellaris
ENSCGRG00001023942	Tsr1	94	55.159	ENSAPEG00000008452	tsr1	100	54.731	Amphiprion_percula
ENSCGRG00001023942	Tsr1	92	69.717	ENSAPLG00000013422	TSR1	100	69.303	Anas_platyrhynchos
ENSCGRG00001023942	Tsr1	70	58.681	ENSACAG00000000859	TSR1	92	58.160	Anolis_carolinensis
ENSCGRG00001023942	Tsr1	100	85.181	ENSANAG00000031071	TSR1	100	85.181	Aotus_nancymaae
ENSCGRG00001023942	Tsr1	99	54.077	ENSACLG00000007595	tsr1	99	53.930	Astatotilapia_calliptera
ENSCGRG00001023942	Tsr1	50	47.826	ENSAMXG00000008470	tsr1	87	48.068	Astyanax_mexicanus
ENSCGRG00001023942	Tsr1	100	86.957	ENSBTAG00000004225	TSR1	100	86.584	Bos_taurus
ENSCGRG00001023942	Tsr1	97	39.599	WBGene00006497	tag-151	96	38.491	Caenorhabditis_elegans
ENSCGRG00001023942	Tsr1	100	84.807	ENSCJAG00000012456	TSR1	100	84.807	Callithrix_jacchus
ENSCGRG00001023942	Tsr1	90	85.007	ENSCAFG00000019273	-	100	85.671	Canis_familiaris
ENSCGRG00001023942	Tsr1	100	85.732	ENSCAFG00000002106	-	100	84.453	Canis_familiaris
ENSCGRG00001023942	Tsr1	100	85.360	ENSCAFG00020009728	TSR1	100	84.080	Canis_lupus_dingo
ENSCGRG00001023942	Tsr1	100	87.578	ENSCHIG00000023935	TSR1	100	87.205	Capra_hircus
ENSCGRG00001023942	Tsr1	100	86.070	ENSTSYG00000005468	TSR1	100	85.803	Carlito_syrichta
ENSCGRG00001023942	Tsr1	93	84.605	ENSCPOG00000014833	TSR1	99	84.605	Cavia_porcellus
ENSCGRG00001023942	Tsr1	93	85.235	ENSCCAG00000028962	TSR1	98	85.235	Cebus_capucinus
ENSCGRG00001023942	Tsr1	100	85.093	ENSCATG00000044262	TSR1	100	84.720	Cercocebus_atys
ENSCGRG00001023942	Tsr1	100	85.821	ENSCLAG00000005567	TSR1	100	84.577	Chinchilla_lanigera
ENSCGRG00001023942	Tsr1	100	85.217	ENSCSAG00000013788	TSR1	100	84.845	Chlorocebus_sabaeus
ENSCGRG00001023942	Tsr1	99	68.329	ENSCPBG00000020363	TSR1	97	68.154	Chrysemys_picta_bellii
ENSCGRG00001023942	Tsr1	97	46.038	ENSCING00000020658	-	99	45.283	Ciona_intestinalis
ENSCGRG00001023942	Tsr1	97	44.641	ENSCSAVG00000001875	-	100	44.055	Ciona_savignyi
ENSCGRG00001023942	Tsr1	100	78.331	ENSCANG00000033056	TSR1	100	77.709	Colobus_angolensis_palliatus
ENSCGRG00001023942	Tsr1	100	90.535	ENSCGRG00000013015	Tsr1	100	90.286	Cricetulus_griseus_crigri
ENSCGRG00001023942	Tsr1	99	53.486	ENSCSEG00000013009	tsr1	99	53.855	Cynoglossus_semilaevis
ENSCGRG00001023942	Tsr1	99	54.710	ENSCVAG00000000506	tsr1	99	54.369	Cyprinodon_variegatus
ENSCGRG00001023942	Tsr1	99	54.024	ENSDARG00000007744	tsr1	99	54.634	Danio_rerio
ENSCGRG00001023942	Tsr1	100	84.682	ENSDNOG00000004715	TSR1	100	86.050	Dasypus_novemcinctus
ENSCGRG00001023942	Tsr1	97	74.326	ENSDORG00000023234	-	100	72.657	Dipodomys_ordii
ENSCGRG00001023942	Tsr1	100	85.466	ENSDORG00000016371	-	100	85.590	Dipodomys_ordii
ENSCGRG00001023942	Tsr1	97	42.647	FBgn0037073	Tsr1	96	43.140	Drosophila_melanogaster
ENSCGRG00001023942	Tsr1	100	76.588	ENSETEG00000017534	TSR1	89	88.852	Echinops_telfairi
ENSCGRG00001023942	Tsr1	96	52.842	ENSEBUG00000013731	TSR1	98	52.196	Eptatretus_burgeri
ENSCGRG00001023942	Tsr1	100	86.194	ENSEASG00005009302	TSR1	97	86.318	Equus_asinus_asinus
ENSCGRG00001023942	Tsr1	100	85.945	ENSECAG00000009114	TSR1	100	86.070	Equus_caballus
ENSCGRG00001023942	Tsr1	99	54.087	ENSELUG00000020984	tsr1	95	54.031	Esox_lucius
ENSCGRG00001023942	Tsr1	100	86.335	ENSFCAG00000006313	TSR1	100	85.839	Felis_catus
ENSCGRG00001023942	Tsr1	99	68.765	ENSFALG00000006532	TSR1	99	68.889	Ficedula_albicollis
ENSCGRG00001023942	Tsr1	100	86.301	ENSFDAG00000006038	TSR1	100	86.301	Fukomys_damarensis
ENSCGRG00001023942	Tsr1	99	54.491	ENSFHEG00000003626	tsr1	99	54.207	Fundulus_heteroclitus
ENSCGRG00001023942	Tsr1	99	52.451	ENSGMOG00000010336	tsr1	99	53.431	Gadus_morhua
ENSCGRG00001023942	Tsr1	99	53.589	ENSGAFG00000012993	tsr1	99	53.623	Gambusia_affinis
ENSCGRG00001023942	Tsr1	99	53.006	ENSGACG00000010843	tsr1	99	53.497	Gasterosteus_aculeatus
ENSCGRG00001023942	Tsr1	99	68.758	ENSGAGG00000025619	-	99	68.532	Gopherus_agassizii
ENSCGRG00001023942	Tsr1	100	86.070	ENSGGOG00000001704	TSR1	100	85.572	Gorilla_gorilla
ENSCGRG00001023942	Tsr1	99	54.251	ENSHBUG00000017904	tsr1	100	54.731	Haplochromis_burtoni
ENSCGRG00001023942	Tsr1	97	77.121	ENSHGLG00000015688	-	99	76.093	Heterocephalus_glaber_female
ENSCGRG00001023942	Tsr1	100	86.460	ENSHGLG00000012806	-	100	85.217	Heterocephalus_glaber_female
ENSCGRG00001023942	Tsr1	100	86.460	ENSHGLG00100015392	TSR1	100	85.217	Heterocephalus_glaber_male
ENSCGRG00001023942	Tsr1	99	55.638	ENSHCOG00000001432	tsr1	99	55.886	Hippocampus_comes
ENSCGRG00001023942	Tsr1	99	54.611	ENSIPUG00000004618	tsr1	99	55.329	Ictalurus_punctatus
ENSCGRG00001023942	Tsr1	100	86.087	ENSSTOG00000011819	TSR1	100	86.087	Ictidomys_tridecemlineatus
ENSCGRG00001023942	Tsr1	92	82.361	ENSJJAG00000019505	Tsr1	95	81.793	Jaculus_jaculus
ENSCGRG00001023942	Tsr1	99	53.782	ENSKMAG00000005763	tsr1	99	53.559	Kryptolebias_marmoratus
ENSCGRG00001023942	Tsr1	99	63.882	ENSLACG00000002197	TSR1	99	63.636	Latimeria_chalumnae
ENSCGRG00001023942	Tsr1	82	59.016	ENSLOCG00000006491	TSR1	88	57.377	Lepisosteus_oculatus
ENSCGRG00001023942	Tsr1	100	85.342	ENSMFAG00000021330	TSR1	100	84.969	Macaca_fascicularis
ENSCGRG00001023942	Tsr1	100	84.969	ENSMMUG00000017519	TSR1	100	84.596	Macaca_mulatta
ENSCGRG00001023942	Tsr1	100	84.969	ENSMNEG00000031382	TSR1	100	84.596	Macaca_nemestrina
ENSCGRG00001023942	Tsr1	100	84.969	ENSMLEG00000036733	TSR1	100	84.596	Mandrillus_leucophaeus
ENSCGRG00001023942	Tsr1	99	53.735	ENSMZEG00005007477	tsr1	99	54.469	Maylandia_zebra
ENSCGRG00001023942	Tsr1	99	68.025	ENSMGAG00000005576	TSR1	99	67.901	Meleagris_gallopavo
ENSCGRG00001023942	Tsr1	100	87.205	ENSMICG00000012943	TSR1	100	87.205	Microcebus_murinus
ENSCGRG00001023942	Tsr1	100	91.418	ENSMOCG00000022764	Tsr1	100	91.418	Microtus_ochrogaster
ENSCGRG00001023942	Tsr1	99	54.227	ENSMMOG00000014280	tsr1	99	54.313	Mola_mola
ENSCGRG00001023942	Tsr1	100	77.019	ENSMODG00000010658	TSR1	100	76.617	Monodelphis_domestica
ENSCGRG00001023942	Tsr1	99	54.187	ENSMALG00000011681	tsr1	99	54.262	Monopterus_albus
ENSCGRG00001023942	Tsr1	100	91.542	MGP_CAROLIEiJ_G0016727	Tsr1	100	91.791	Mus_caroli
ENSCGRG00001023942	Tsr1	100	92.289	ENSMUSG00000038335	Tsr1	100	92.537	Mus_musculus
ENSCGRG00001023942	Tsr1	100	91.791	MGP_PahariEiJ_G0017864	Tsr1	100	92.040	Mus_pahari
ENSCGRG00001023942	Tsr1	100	92.413	MGP_SPRETEiJ_G0017570	Tsr1	100	92.662	Mus_spretus
ENSCGRG00001023942	Tsr1	82	86.149	ENSMPUG00000013000	TSR1	100	85.845	Mustela_putorius_furo
ENSCGRG00001023942	Tsr1	100	86.584	ENSMLUG00000003505	TSR1	100	86.708	Myotis_lucifugus
ENSCGRG00001023942	Tsr1	99	54.187	ENSNBRG00000020728	tsr1	99	53.670	Neolamprologus_brichardi
ENSCGRG00001023942	Tsr1	100	77.335	ENSNLEG00000017184	TSR1	51	83.202	Nomascus_leucogenys
ENSCGRG00001023942	Tsr1	100	71.801	ENSMEUG00000015828	TSR1	100	71.801	Notamacropus_eugenii
ENSCGRG00001023942	Tsr1	99	54.843	ENSONIG00000013131	tsr1	99	55.043	Oreochromis_niloticus
ENSCGRG00001023942	Tsr1	96	73.745	ENSOANG00000008637	TSR1	100	73.359	Ornithorhynchus_anatinus
ENSCGRG00001023942	Tsr1	100	85.767	ENSOCUG00000014256	TSR1	100	85.767	Oryctolagus_cuniculus
ENSCGRG00001023942	Tsr1	99	53.717	ENSORLG00000004926	tsr1	99	54.152	Oryzias_latipes
ENSCGRG00001023942	Tsr1	99	53.782	ENSORLG00020008792	tsr1	99	53.855	Oryzias_latipes_hni
ENSCGRG00001023942	Tsr1	99	53.597	ENSORLG00015013838	tsr1	99	54.031	Oryzias_latipes_hsok
ENSCGRG00001023942	Tsr1	99	53.571	ENSOMEG00000004830	tsr1	99	54.633	Oryzias_melastigma
ENSCGRG00001023942	Tsr1	100	84.957	ENSOGAG00000004492	TSR1	100	84.710	Otolemur_garnettii
ENSCGRG00001023942	Tsr1	100	87.578	ENSOARG00000015437	TSR1	97	87.329	Ovis_aries
ENSCGRG00001023942	Tsr1	100	85.821	ENSPPAG00000036355	TSR1	100	85.323	Pan_paniscus
ENSCGRG00001023942	Tsr1	100	86.335	ENSPPRG00000015519	-	100	85.839	Panthera_pardus
ENSCGRG00001023942	Tsr1	100	86.584	ENSPTIG00000010608	TSR1	100	86.087	Panthera_tigris_altaica
ENSCGRG00001023942	Tsr1	100	85.821	ENSPTRG00000008547	TSR1	100	85.323	Pan_troglodytes
ENSCGRG00001023942	Tsr1	100	81.863	ENSPANG00000024463	TSR1	100	81.739	Papio_anubis
ENSCGRG00001023942	Tsr1	99	54.501	ENSPKIG00000013972	tsr1	99	54.332	Paramormyrops_kingsleyae
ENSCGRG00001023942	Tsr1	88	68.406	ENSPSIG00000018258	TSR1	100	68.265	Pelodiscus_sinensis
ENSCGRG00001023942	Tsr1	99	56.049	ENSPMGG00000011577	tsr1	99	55.926	Periophthalmus_magnuspinnatus
ENSCGRG00001023942	Tsr1	100	91.169	ENSPEMG00000018033	Tsr1	100	91.418	Peromyscus_maniculatus_bairdii
ENSCGRG00001023942	Tsr1	100	77.419	ENSPCIG00000009357	TSR1	98	77.295	Phascolarctos_cinereus
ENSCGRG00001023942	Tsr1	99	54.435	ENSPFOG00000004483	TSR1	99	55.043	Poecilia_formosa
ENSCGRG00001023942	Tsr1	99	54.121	ENSPLAG00000022320	tsr1	99	54.367	Poecilia_latipinna
ENSCGRG00001023942	Tsr1	99	53.349	ENSPMEG00000004577	tsr1	99	53.541	Poecilia_mexicana
ENSCGRG00001023942	Tsr1	97	53.704	ENSPREG00000010354	tsr1	95	54.074	Poecilia_reticulata
ENSCGRG00001023942	Tsr1	100	76.989	ENSPPYG00000007792	TSR1	100	75.520	Pongo_abelii
ENSCGRG00001023942	Tsr1	53	90.698	ENSPCAG00000012973	-	72	90.698	Procavia_capensis
ENSCGRG00001023942	Tsr1	100	87.329	ENSPCOG00000017928	TSR1	100	86.460	Propithecus_coquereli
ENSCGRG00001023942	Tsr1	100	85.679	ENSPVAG00000002162	TSR1	100	85.679	Pteropus_vampyrus
ENSCGRG00001023942	Tsr1	99	54.317	ENSPNYG00000016163	tsr1	99	54.172	Pundamilia_nyererei
ENSCGRG00001023942	Tsr1	99	54.122	ENSPNAG00000008659	tsr1	99	54.241	Pygocentrus_nattereri
ENSCGRG00001023942	Tsr1	100	90.796	ENSRNOG00000002980	Tsr1	100	90.672	Rattus_norvegicus
ENSCGRG00001023942	Tsr1	100	85.217	ENSRBIG00000040016	TSR1	100	85.217	Rhinopithecus_bieti
ENSCGRG00001023942	Tsr1	100	85.217	ENSRROG00000030361	TSR1	100	85.217	Rhinopithecus_roxellana
ENSCGRG00001023942	Tsr1	96	30.949	YDL060W	-	96	30.934	Saccharomyces_cerevisiae
ENSCGRG00001023942	Tsr1	100	85.821	ENSSBOG00000020785	TSR1	100	85.305	Saimiri_boliviensis_boliviensis
ENSCGRG00001023942	Tsr1	100	75.776	ENSSHAG00000011394	TSR1	100	75.528	Sarcophilus_harrisii
ENSCGRG00001023942	Tsr1	99	55.692	ENSSFOG00015005455	tsr1	99	55.569	Scleropages_formosus
ENSCGRG00001023942	Tsr1	99	53.054	ENSSMAG00000009504	tsr1	99	53.486	Scophthalmus_maximus
ENSCGRG00001023942	Tsr1	99	54.502	ENSSDUG00000012074	tsr1	99	54.502	Seriola_dumerili
ENSCGRG00001023942	Tsr1	99	54.796	ENSSLDG00000002031	tsr1	99	54.874	Seriola_lalandi_dorsalis
ENSCGRG00001023942	Tsr1	100	72.671	ENSSARG00000000759	TSR1	100	72.919	Sorex_araneus
ENSCGRG00001023942	Tsr1	99	67.528	ENSSPUG00000007042	TSR1	99	67.159	Sphenodon_punctatus
ENSCGRG00001023942	Tsr1	99	53.477	ENSSPAG00000021951	tsr1	99	54.197	Stegastes_partitus
ENSCGRG00001023942	Tsr1	100	87.205	ENSSSCG00000038534	TSR1	100	86.211	Sus_scrofa
ENSCGRG00001023942	Tsr1	90	71.233	ENSTGUG00000005883	TSR1	100	71.233	Taeniopygia_guttata
ENSCGRG00001023942	Tsr1	99	55.006	ENSTRUG00000004665	tsr1	99	54.545	Takifugu_rubripes
ENSCGRG00001023942	Tsr1	99	55.025	ENSTNIG00000016196	tsr1	99	55.025	Tetraodon_nigroviridis
ENSCGRG00001023942	Tsr1	67	93.077	ENSTBEG00000015275	-	67	93.077	Tupaia_belangeri
ENSCGRG00001023942	Tsr1	100	86.832	ENSTTRG00000001177	TSR1	100	85.839	Tursiops_truncatus
ENSCGRG00001023942	Tsr1	100	85.342	ENSUAMG00000025160	TSR1	100	84.069	Ursus_americanus
ENSCGRG00001023942	Tsr1	97	85.568	ENSUMAG00000009294	TSR1	99	84.713	Ursus_maritimus
ENSCGRG00001023942	Tsr1	84	82.344	ENSVPAG00000000228	TSR1	100	81.157	Vicugna_pacos
ENSCGRG00001023942	Tsr1	100	85.236	ENSVVUG00000021767	TSR1	100	83.955	Vulpes_vulpes
ENSCGRG00001023942	Tsr1	99	58.578	ENSXETG00000023797	tsr1	100	59.309	Xenopus_tropicalis
ENSCGRG00001023942	Tsr1	99	54.258	ENSXCOG00000009635	tsr1	99	54.335	Xiphophorus_couchianus
ENSCGRG00001023942	Tsr1	99	53.670	ENSXMAG00000001397	tsr1	96	53.865	Xiphophorus_maculatus