EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001024068 (Gene tree)
Gene ID: -
Gene Symbol: Slirp
Alias: 1810035L17Rik
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 3813 bases
Position: chrscaffold_1:117308961-117312773
Accession: 100759888
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001026884	RRM_1	PF00076.22	6.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001031130	-	336	-	ENSCGRP00001026884	111 (aa)	XP_003499706	UPI00022F412C

Gene Model

Click here to download ENSCGRG00001024068's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001024068's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001024068	Slirp	86	30.986	ENSCGRG00001005044	Hnrnpab	58	30.986
ENSCGRG00001024068	Slirp	82	32.979	ENSCGRG00001013330	Msi2	58	32.530

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001024068	Slirp	86	67.708	ENSG00000119705	SLIRP	99	77.333	Homo_sapiens
ENSCGRG00001024068	Slirp	64	54.930	ENSAPOG00000001298	slirp	71	54.930	Acanthochromis_polyacanthus
ENSCGRG00001024068	Slirp	82	73.626	ENSAMEG00000003975	SLIRP	100	73.626	Ailuropoda_melanoleuca
ENSCGRG00001024068	Slirp	92	42.157	ENSACIG00000023083	slirp	99	42.157	Amphilophus_citrinellus
ENSCGRG00001024068	Slirp	65	52.778	ENSAOCG00000006342	slirp	73	52.778	Amphiprion_ocellaris
ENSCGRG00001024068	Slirp	65	52.778	ENSAPEG00000015917	slirp	73	52.778	Amphiprion_percula
ENSCGRG00001024068	Slirp	65	52.778	ENSAPEG00000015719	-	73	52.778	Amphiprion_percula
ENSCGRG00001024068	Slirp	64	50.704	ENSATEG00000013525	slirp	71	50.704	Anabas_testudineus
ENSCGRG00001024068	Slirp	78	45.977	ENSAMXG00000018693	slirp	87	45.977	Astyanax_mexicanus
ENSCGRG00001024068	Slirp	100	70.270	ENSCJAG00000016946	SLIRP	95	78.409	Callithrix_jacchus
ENSCGRG00001024068	Slirp	100	68.468	ENSCAFG00020015876	-	100	68.468	Canis_lupus_dingo
ENSCGRG00001024068	Slirp	100	70.270	ENSCCAG00000030130	SLIRP	100	70.270	Cebus_capucinus
ENSCGRG00001024068	Slirp	100	63.964	ENSCATG00000036327	SLIRP	95	71.591	Cercocebus_atys
ENSCGRG00001024068	Slirp	83	70.652	ENSCSAG00000011736	SLIRP	100	65.766	Chlorocebus_sabaeus
ENSCGRG00001024068	Slirp	63	55.714	ENSCPBG00000026327	SLIRP	71	55.714	Chrysemys_picta_bellii
ENSCGRG00001024068	Slirp	62	81.159	ENSCANG00000032892	SLIRP	90	73.864	Colobus_angolensis_palliatus
ENSCGRG00001024068	Slirp	100	100.000	ENSCGRG00000017440	Slirp	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001024068	Slirp	75	49.398	ENSCSEG00000015766	slirp	84	49.398	Cynoglossus_semilaevis
ENSCGRG00001024068	Slirp	63	58.571	ENSCVAG00000012504	slirp	69	58.571	Cyprinodon_variegatus
ENSCGRG00001024068	Slirp	65	55.556	ENSDARG00000097753	slirp	69	56.338	Danio_rerio
ENSCGRG00001024068	Slirp	82	70.330	ENSDNOG00000007721	SLIRP	100	65.766	Dasypus_novemcinctus
ENSCGRG00001024068	Slirp	100	64.865	ENSDORG00000012379	Slirp	100	64.865	Dipodomys_ordii
ENSCGRG00001024068	Slirp	90	62.000	ENSETEG00000010345	SLIRP	100	62.162	Echinops_telfairi
ENSCGRG00001024068	Slirp	100	69.369	ENSEASG00005020193	SLIRP	100	69.369	Equus_asinus_asinus
ENSCGRG00001024068	Slirp	83	64.130	ENSEEUG00000007257	SLIRP	90	64.130	Erinaceus_europaeus
ENSCGRG00001024068	Slirp	64	49.296	ENSELUG00000016800	slirp	70	49.296	Esox_lucius
ENSCGRG00001024068	Slirp	79	80.682	ENSFCAG00000036326	SLIRP	90	80.682	Felis_catus
ENSCGRG00001024068	Slirp	64	50.704	ENSFALG00000012583	SLIRP	86	45.652	Ficedula_albicollis
ENSCGRG00001024068	Slirp	97	62.385	ENSFDAG00000008347	SLIRP	96	62.385	Fukomys_damarensis
ENSCGRG00001024068	Slirp	73	48.148	ENSFHEG00000004709	slirp	86	48.148	Fundulus_heteroclitus
ENSCGRG00001024068	Slirp	91	44.554	ENSGMOG00000016948	slirp	95	44.554	Gadus_morhua
ENSCGRG00001024068	Slirp	65	47.222	ENSGALG00000031238	SLIRP	71	50.746	Gallus_gallus
ENSCGRG00001024068	Slirp	92	49.020	ENSGAFG00000010998	slirp	99	49.020	Gambusia_affinis
ENSCGRG00001024068	Slirp	77	50.000	ENSGACG00000020137	slirp	99	50.000	Gasterosteus_aculeatus
ENSCGRG00001024068	Slirp	80	56.180	ENSGAGG00000009953	SLIRP	61	56.180	Gopherus_agassizii
ENSCGRG00001024068	Slirp	86	66.316	ENSGGOG00000011059	-	95	73.864	Gorilla_gorilla
ENSCGRG00001024068	Slirp	100	59.459	ENSHGLG00000018491	SLIRP	100	59.459	Heterocephalus_glaber_female
ENSCGRG00001024068	Slirp	100	59.459	ENSHGLG00100014153	SLIRP	100	59.459	Heterocephalus_glaber_male
ENSCGRG00001024068	Slirp	89	49.495	ENSHCOG00000006795	slirp	99	49.495	Hippocampus_comes
ENSCGRG00001024068	Slirp	78	44.828	ENSIPUG00000010214	SLIRP	87	44.828	Ictalurus_punctatus
ENSCGRG00001024068	Slirp	83	72.826	ENSSTOG00000034316	SLIRP	100	67.568	Ictidomys_tridecemlineatus
ENSCGRG00001024068	Slirp	92	42.857	ENSKMAG00000002038	slirp	99	42.857	Kryptolebias_marmoratus
ENSCGRG00001024068	Slirp	81	48.889	ENSLBEG00000007564	slirp	88	48.889	Labrus_bergylta
ENSCGRG00001024068	Slirp	92	48.039	ENSLACG00000013434	SLIRP	96	48.039	Latimeria_chalumnae
ENSCGRG00001024068	Slirp	83	69.565	ENSMFAG00000042960	SLIRP	95	73.864	Macaca_fascicularis
ENSCGRG00001024068	Slirp	83	69.565	ENSMMUG00000029256	SLIRP	95	72.727	Macaca_mulatta
ENSCGRG00001024068	Slirp	83	69.565	ENSMNEG00000028921	SLIRP	95	73.864	Macaca_nemestrina
ENSCGRG00001024068	Slirp	79	71.591	ENSMLEG00000043644	SLIRP	90	71.591	Mandrillus_leucophaeus
ENSCGRG00001024068	Slirp	81	48.889	ENSMZEG00005004617	slirp	89	48.889	Maylandia_zebra
ENSCGRG00001024068	Slirp	100	83.784	ENSMAUG00000003857	Slirp	100	83.784	Mesocricetus_auratus
ENSCGRG00001024068	Slirp	100	60.360	ENSMICG00000012080	SLIRP	100	60.360	Microcebus_murinus
ENSCGRG00001024068	Slirp	98	78.899	ENSMOCG00000016019	Slirp	97	78.899	Microtus_ochrogaster
ENSCGRG00001024068	Slirp	92	44.118	ENSMMOG00000018268	slirp	99	44.118	Mola_mola
ENSCGRG00001024068	Slirp	63	64.286	ENSMODG00000005207	-	99	64.286	Monodelphis_domestica
ENSCGRG00001024068	Slirp	81	45.556	ENSMALG00000012581	slirp	90	45.556	Monopterus_albus
ENSCGRG00001024068	Slirp	97	67.593	MGP_CAROLIEiJ_G0017995	Slirp	100	67.593	Mus_caroli
ENSCGRG00001024068	Slirp	98	68.807	ENSMUSG00000021040	Slirp	97	68.807	Mus_musculus
ENSCGRG00001024068	Slirp	98	68.807	MGP_SPRETEiJ_G0018840	Slirp	97	68.807	Mus_spretus
ENSCGRG00001024068	Slirp	90	65.000	ENSMLUG00000029544	-	100	64.865	Myotis_lucifugus
ENSCGRG00001024068	Slirp	86	67.368	ENSMLUG00000024998	-	100	65.766	Myotis_lucifugus
ENSCGRG00001024068	Slirp	97	69.444	ENSNGAG00000016363	Slirp	100	69.444	Nannospalax_galili
ENSCGRG00001024068	Slirp	100	58.559	ENSNLEG00000032459	-	95	67.045	Nomascus_leucogenys
ENSCGRG00001024068	Slirp	93	57.692	ENSNLEG00000027238	-	93	64.198	Nomascus_leucogenys
ENSCGRG00001024068	Slirp	98	65.138	ENSODEG00000012580	SLIRP	99	69.231	Octodon_degus
ENSCGRG00001024068	Slirp	81	50.000	ENSONIG00000011692	slirp	89	50.000	Oreochromis_niloticus
ENSCGRG00001024068	Slirp	83	64.130	ENSOANG00000022366	SLIRP	80	64.130	Ornithorhynchus_anatinus
ENSCGRG00001024068	Slirp	95	43.810	ENSORLG00000010761	slirp	80	43.810	Oryzias_latipes
ENSCGRG00001024068	Slirp	81	48.889	ENSORLG00020022188	slirp	88	48.889	Oryzias_latipes_hni
ENSCGRG00001024068	Slirp	92	45.098	ENSORLG00015020171	slirp	99	45.098	Oryzias_latipes_hsok
ENSCGRG00001024068	Slirp	81	50.000	ENSOMEG00000019321	slirp	88	50.000	Oryzias_melastigma
ENSCGRG00001024068	Slirp	86	66.316	ENSPPAG00000040710	-	95	73.864	Pan_paniscus
ENSCGRG00001024068	Slirp	79	80.682	ENSPPRG00000014350	SLIRP	90	80.682	Panthera_pardus
ENSCGRG00001024068	Slirp	79	80.682	ENSPTIG00000014196	SLIRP	90	80.682	Panthera_tigris_altaica
ENSCGRG00001024068	Slirp	84	66.667	ENSPTRG00000030691	SLIRP	95	73.864	Pan_troglodytes
ENSCGRG00001024068	Slirp	100	64.865	ENSPANG00000026323	SLIRP	95	72.727	Papio_anubis
ENSCGRG00001024068	Slirp	64	49.296	ENSPKIG00000008831	slirp	70	49.296	Paramormyrops_kingsleyae
ENSCGRG00001024068	Slirp	72	57.500	ENSPMGG00000010541	slirp	91	57.500	Periophthalmus_magnuspinnatus
ENSCGRG00001024068	Slirp	88	76.768	ENSPEMG00000013234	Slirp	96	77.273	Peromyscus_maniculatus_bairdii
ENSCGRG00001024068	Slirp	69	46.753	ENSPMAG00000009355	slirp	80	46.753	Petromyzon_marinus
ENSCGRG00001024068	Slirp	72	58.537	ENSPCIG00000026842	-	88	58.537	Phascolarctos_cinereus
ENSCGRG00001024068	Slirp	92	47.059	ENSPFOG00000006758	slirp	99	47.059	Poecilia_formosa
ENSCGRG00001024068	Slirp	92	48.039	ENSPLAG00000011140	slirp	99	48.039	Poecilia_latipinna
ENSCGRG00001024068	Slirp	92	47.059	ENSPMEG00000019535	slirp	99	47.059	Poecilia_mexicana
ENSCGRG00001024068	Slirp	92	47.059	ENSPREG00000011673	slirp	99	47.059	Poecilia_reticulata
ENSCGRG00001024068	Slirp	86	63.158	ENSPPYG00000006030	SLIRP	100	61.261	Pongo_abelii
ENSCGRG00001024068	Slirp	100	63.063	ENSPCOG00000015159	SLIRP	100	63.063	Propithecus_coquereli
ENSCGRG00001024068	Slirp	89	48.485	ENSPNAG00000008633	slirp	99	48.485	Pygocentrus_nattereri
ENSCGRG00001024068	Slirp	62	79.710	ENSRBIG00000032998	-	81	71.591	Rhinopithecus_bieti
ENSCGRG00001024068	Slirp	72	71.250	ENSRBIG00000031396	-	99	65.657	Rhinopithecus_bieti
ENSCGRG00001024068	Slirp	83	71.739	ENSRBIG00000032222	-	95	73.864	Rhinopithecus_bieti
ENSCGRG00001024068	Slirp	82	67.033	ENSRBIG00000035817	-	99	63.889	Rhinopithecus_bieti
ENSCGRG00001024068	Slirp	72	70.000	ENSRROG00000035604	-	99	64.646	Rhinopithecus_roxellana
ENSCGRG00001024068	Slirp	83	71.739	ENSRROG00000036656	-	95	73.864	Rhinopithecus_roxellana
ENSCGRG00001024068	Slirp	68	77.632	ENSRROG00000041312	-	91	72.826	Rhinopithecus_roxellana
ENSCGRG00001024068	Slirp	65	79.167	ENSRROG00000017133	-	95	71.429	Rhinopithecus_roxellana
ENSCGRG00001024068	Slirp	79	76.136	ENSSBOG00000020014	SLIRP	95	76.136	Saimiri_boliviensis_boliviensis
ENSCGRG00001024068	Slirp	89	49.495	ENSSFOG00015011165	slirp	99	49.495	Scleropages_formosus
ENSCGRG00001024068	Slirp	91	33.663	ENSSMAG00000012930	slirp	98	33.663	Scophthalmus_maximus
ENSCGRG00001024068	Slirp	81	50.000	ENSSDUG00000021883	slirp	58	50.000	Seriola_dumerili
ENSCGRG00001024068	Slirp	81	50.000	ENSSLDG00000023136	slirp	80	50.000	Seriola_lalandi_dorsalis
ENSCGRG00001024068	Slirp	65	52.778	ENSSPUG00000009346	SLIRP	73	52.778	Sphenodon_punctatus
ENSCGRG00001024068	Slirp	63	55.714	ENSSPAG00000013477	slirp	70	55.714	Stegastes_partitus
ENSCGRG00001024068	Slirp	100	65.766	ENSSSCG00000028167	SLIRP	100	65.766	Sus_scrofa
ENSCGRG00001024068	Slirp	64	53.521	ENSTGUG00000012337	SLIRP	86	47.826	Taeniopygia_guttata
ENSCGRG00001024068	Slirp	65	49.315	ENSTRUG00000020127	slirp	72	49.315	Takifugu_rubripes
ENSCGRG00001024068	Slirp	100	70.270	ENSUAMG00000022445	SLIRP	100	70.270	Ursus_americanus
ENSCGRG00001024068	Slirp	100	69.369	ENSUMAG00000007166	SLIRP	100	69.369	Ursus_maritimus
ENSCGRG00001024068	Slirp	100	69.369	ENSVPAG00000001781	SLIRP	100	69.369	Vicugna_pacos
ENSCGRG00001024068	Slirp	83	70.652	ENSVVUG00000004436	SLIRP	100	68.468	Vulpes_vulpes
ENSCGRG00001024068	Slirp	74	53.659	ENSXETG00000030343	SLIRP	91	53.659	Xenopus_tropicalis
ENSCGRG00001024068	Slirp	92	48.039	ENSXCOG00000009422	slirp	99	48.039	Xiphophorus_couchianus
ENSCGRG00001024068	Slirp	92	49.020	ENSXMAG00000015655	slirp	99	49.020	Xiphophorus_maculatus