EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001024071 (Gene tree)
Gene ID: -
Gene Symbol: Pnkd
Alias: 2210013N15Rik|2810403H05Rik|Brp17
Full Name: PNKD%2C MBL domain containing
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 70932 bases
Position: chrscaffold_0:190642921-190713852
Accession: 100750526
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001026899	Lactamase_B	PF00753.27	3.8e-10	1	1
ENSCGRP00001026892	Lactamase_B	PF00753.27	5.2e-10	1	1
ENSCGRP00001026896	Lactamase_B	PF00753.27	7.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001031145	-	1109	-	ENSCGRP00001026899	360 (aa)	XP_003513271	G3IEK8
ENSCGRT00001031138	-	1158	-	ENSCGRP00001026892	385 (aa)	-	-
ENSCGRT00001031142	-	1272	-	ENSCGRP00001026896	424 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001024071's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001024071's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001024071	Pnkd	74	40.299	ENSCGRG00001014522	Hagh	83	40.299
ENSCGRG00001024071	Pnkd	64	43.348	ENSCGRG00001000478	Haghl	100	43.348

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001024071	Pnkd	100	96.104	ENSG00000127838	PNKD	100	96.104	Homo_sapiens
ENSCGRG00001024071	Pnkd	98	57.627	ENSAPOG00000019072	pnkd	97	57.143	Acanthochromis_polyacanthus
ENSCGRG00001024071	Pnkd	100	95.584	ENSAMEG00000003089	PNKD	100	95.584	Ailuropoda_melanoleuca
ENSCGRG00001024071	Pnkd	97	54.032	ENSACIG00000015359	pnkd	96	54.032	Amphilophus_citrinellus
ENSCGRG00001024071	Pnkd	81	58.863	ENSAOCG00000024159	pnkd	98	53.709	Amphiprion_ocellaris
ENSCGRG00001024071	Pnkd	89	61.442	ENSAOCG00000011458	-	99	56.303	Amphiprion_ocellaris
ENSCGRG00001024071	Pnkd	89	61.442	ENSAPEG00000011710	pnkd	89	61.442	Amphiprion_percula
ENSCGRG00001024071	Pnkd	89	61.129	ENSATEG00000002727	pnkd	97	56.977	Anabas_testudineus
ENSCGRG00001024071	Pnkd	89	62.813	ENSACAG00000001617	PNKD	99	55.978	Anolis_carolinensis
ENSCGRG00001024071	Pnkd	100	95.584	ENSANAG00000019661	PNKD	100	95.584	Aotus_nancymaae
ENSCGRG00001024071	Pnkd	95	59.767	ENSACLG00000021665	pnkd	89	62.069	Astatotilapia_calliptera
ENSCGRG00001024071	Pnkd	100	58.172	ENSAMXG00000043305	pnkd	90	61.963	Astyanax_mexicanus
ENSCGRG00001024071	Pnkd	100	90.556	ENSBTAG00000003936	PNKD	100	90.556	Bos_taurus
ENSCGRG00001024071	Pnkd	100	95.584	ENSCJAG00000010820	PNKD	100	95.584	Callithrix_jacchus
ENSCGRG00001024071	Pnkd	100	93.506	ENSCAFG00000014632	PNKD	100	93.506	Canis_familiaris
ENSCGRG00001024071	Pnkd	100	90.833	ENSCAFG00020027093	PNKD	100	90.833	Canis_lupus_dingo
ENSCGRG00001024071	Pnkd	100	94.545	ENSCHIG00000002862	PNKD	100	94.545	Capra_hircus
ENSCGRG00001024071	Pnkd	100	95.325	ENSTSYG00000034863	PNKD	100	95.325	Carlito_syrichta
ENSCGRG00001024071	Pnkd	100	95.325	ENSCPOG00000020589	PNKD	100	95.325	Cavia_porcellus
ENSCGRG00001024071	Pnkd	100	95.844	ENSCCAG00000036713	PNKD	100	95.844	Cebus_capucinus
ENSCGRG00001024071	Pnkd	100	95.844	ENSCATG00000041188	PNKD	100	95.844	Cercocebus_atys
ENSCGRG00001024071	Pnkd	100	96.623	ENSCLAG00000012048	PNKD	100	96.623	Chinchilla_lanigera
ENSCGRG00001024071	Pnkd	100	95.844	ENSCSAG00000008892	PNKD	100	95.844	Chlorocebus_sabaeus
ENSCGRG00001024071	Pnkd	100	95.844	ENSCANG00000032283	PNKD	100	95.844	Colobus_angolensis_palliatus
ENSCGRG00001024071	Pnkd	100	100.000	ENSCGRG00000005443	Pnkd	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001024071	Pnkd	98	55.899	ENSCSEG00000013958	pnkd	99	53.782	Cynoglossus_semilaevis
ENSCGRG00001024071	Pnkd	89	61.442	ENSCVAG00000005723	pnkd	89	61.442	Cyprinodon_variegatus
ENSCGRG00001024071	Pnkd	100	55.956	ENSDARG00000071032	pnkd	89	61.250	Danio_rerio
ENSCGRG00001024071	Pnkd	99	91.086	ENSDNOG00000046154	PNKD	89	90.251	Dasypus_novemcinctus
ENSCGRG00001024071	Pnkd	100	96.124	ENSDORG00000016109	Pnkd	100	96.124	Dipodomys_ordii
ENSCGRG00001024071	Pnkd	100	65.039	ENSETEG00000014587	PNKD	100	65.039	Echinops_telfairi
ENSCGRG00001024071	Pnkd	85	54.248	ENSEBUG00000013857	pnkd	98	53.668	Eptatretus_burgeri
ENSCGRG00001024071	Pnkd	100	91.111	ENSEASG00005012391	PNKD	100	91.111	Equus_asinus_asinus
ENSCGRG00001024071	Pnkd	100	94.545	ENSECAG00000013322	PNKD	100	94.545	Equus_caballus
ENSCGRG00001024071	Pnkd	89	59.561	ENSELUG00000015007	pnkd	91	55.714	Esox_lucius
ENSCGRG00001024071	Pnkd	100	91.111	ENSFCAG00000002373	PNKD	100	91.111	Felis_catus
ENSCGRG00001024071	Pnkd	86	63.107	ENSFALG00000004028	PNKD	97	61.774	Ficedula_albicollis
ENSCGRG00001024071	Pnkd	100	95.844	ENSFDAG00000012326	PNKD	100	95.844	Fukomys_damarensis
ENSCGRG00001024071	Pnkd	89	61.755	ENSFHEG00000010999	pnkd	86	61.755	Fundulus_heteroclitus
ENSCGRG00001024071	Pnkd	100	56.233	ENSGMOG00000009565	pnkd	96	56.686	Gadus_morhua
ENSCGRG00001024071	Pnkd	85	63.072	ENSGALG00000022166	PNKD	98	63.072	Gallus_gallus
ENSCGRG00001024071	Pnkd	89	62.069	ENSGAFG00000013942	pnkd	80	62.069	Gambusia_affinis
ENSCGRG00001024071	Pnkd	96	59.420	ENSGACG00000007119	pnkd	91	61.162	Gasterosteus_aculeatus
ENSCGRG00001024071	Pnkd	88	61.950	ENSGAGG00000017234	PNKD	100	61.950	Gopherus_agassizii
ENSCGRG00001024071	Pnkd	100	96.104	ENSGGOG00000006892	PNKD	100	96.104	Gorilla_gorilla
ENSCGRG00001024071	Pnkd	95	59.767	ENSHBUG00000001234	pnkd	89	62.069	Haplochromis_burtoni
ENSCGRG00001024071	Pnkd	100	95.325	ENSHGLG00000013971	PNKD	100	95.325	Heterocephalus_glaber_female
ENSCGRG00001024071	Pnkd	100	95.325	ENSHGLG00100005225	PNKD	100	95.325	Heterocephalus_glaber_male
ENSCGRG00001024071	Pnkd	99	57.703	ENSHCOG00000018894	pnkd	88	62.420	Hippocampus_comes
ENSCGRG00001024071	Pnkd	100	59.504	ENSIPUG00000013907	pnkd	99	63.844	Ictalurus_punctatus
ENSCGRG00001024071	Pnkd	100	97.403	ENSSTOG00000024593	PNKD	100	97.403	Ictidomys_tridecemlineatus
ENSCGRG00001024071	Pnkd	100	94.545	ENSJJAG00000023559	Pnkd	100	95.584	Jaculus_jaculus
ENSCGRG00001024071	Pnkd	89	61.129	ENSKMAG00000014879	pnkd	89	61.129	Kryptolebias_marmoratus
ENSCGRG00001024071	Pnkd	89	61.442	ENSLBEG00000000985	pnkd	89	61.442	Labrus_bergylta
ENSCGRG00001024071	Pnkd	100	57.377	ENSLOCG00000000821	pnkd	89	61.129	Lepisosteus_oculatus
ENSCGRG00001024071	Pnkd	100	92.217	ENSLAFG00000007427	PNKD	100	92.217	Loxodonta_africana
ENSCGRG00001024071	Pnkd	100	95.844	ENSMFAG00000038281	PNKD	100	95.844	Macaca_fascicularis
ENSCGRG00001024071	Pnkd	50	97.790	ENSMMUG00000022819	-	100	97.790	Macaca_mulatta
ENSCGRG00001024071	Pnkd	100	92.244	ENSMNEG00000041541	PNKD	100	95.860	Macaca_nemestrina
ENSCGRG00001024071	Pnkd	100	95.844	ENSMLEG00000042812	PNKD	100	95.844	Mandrillus_leucophaeus
ENSCGRG00001024071	Pnkd	100	56.749	ENSMAMG00000017212	pnkd	89	61.442	Mastacembelus_armatus
ENSCGRG00001024071	Pnkd	82	62.373	ENSMZEG00005012514	pnkd	100	62.373	Maylandia_zebra
ENSCGRG00001024071	Pnkd	50	51.364	ENSMGAG00000011524	PNKD	100	56.250	Meleagris_gallopavo
ENSCGRG00001024071	Pnkd	100	99.167	ENSMAUG00000013099	Pnkd	100	99.167	Mesocricetus_auratus
ENSCGRG00001024071	Pnkd	100	96.364	ENSMICG00000042547	PNKD	100	96.364	Microcebus_murinus
ENSCGRG00001024071	Pnkd	100	99.223	ENSMOCG00000007956	Pnkd	100	99.223	Microtus_ochrogaster
ENSCGRG00001024071	Pnkd	86	62.136	ENSMMOG00000005679	pnkd	99	58.213	Mola_mola
ENSCGRG00001024071	Pnkd	86	79.421	ENSMODG00000015497	PNKD	93	75.227	Monodelphis_domestica
ENSCGRG00001024071	Pnkd	95	60.290	ENSMALG00000005967	pnkd	78	63.578	Monopterus_albus
ENSCGRG00001024071	Pnkd	100	98.442	MGP_CAROLIEiJ_G0014258	Pnkd	100	98.442	Mus_caroli
ENSCGRG00001024071	Pnkd	100	98.701	ENSMUSG00000026179	Pnkd	100	98.701	Mus_musculus
ENSCGRG00001024071	Pnkd	100	98.701	MGP_PahariEiJ_G0027496	Pnkd	100	98.701	Mus_pahari
ENSCGRG00001024071	Pnkd	100	98.442	MGP_SPRETEiJ_G0015064	Pnkd	100	98.442	Mus_spretus
ENSCGRG00001024071	Pnkd	100	91.944	ENSMPUG00000016531	PNKD	100	91.944	Mustela_putorius_furo
ENSCGRG00001024071	Pnkd	85	93.791	ENSMLUG00000004125	PNKD	100	93.791	Myotis_lucifugus
ENSCGRG00001024071	Pnkd	100	97.403	ENSNGAG00000014980	Pnkd	100	97.403	Nannospalax_galili
ENSCGRG00001024071	Pnkd	86	62.338	ENSNBRG00000020031	pnkd	96	62.136	Neolamprologus_brichardi
ENSCGRG00001024071	Pnkd	100	72.987	ENSMEUG00000011266	PNKD	100	72.987	Notamacropus_eugenii
ENSCGRG00001024071	Pnkd	100	95.000	ENSODEG00000009734	PNKD	100	95.000	Octodon_degus
ENSCGRG00001024071	Pnkd	95	59.184	ENSONIG00000004389	pnkd	89	61.442	Oreochromis_niloticus
ENSCGRG00001024071	Pnkd	100	92.453	ENSOCUG00000023754	PNKD	100	92.453	Oryctolagus_cuniculus
ENSCGRG00001024071	Pnkd	89	59.574	ENSORLG00000026276	pnkd	91	59.574	Oryzias_latipes
ENSCGRG00001024071	Pnkd	89	59.574	ENSORLG00020008373	pnkd	97	61.589	Oryzias_latipes_hni
ENSCGRG00001024071	Pnkd	89	59.878	ENSORLG00015005276	pnkd	97	55.587	Oryzias_latipes_hsok
ENSCGRG00001024071	Pnkd	90	60.429	ENSOMEG00000016106	pnkd	97	55.874	Oryzias_melastigma
ENSCGRG00001024071	Pnkd	85	96.078	ENSOGAG00000001792	PNKD	100	96.078	Otolemur_garnettii
ENSCGRG00001024071	Pnkd	100	94.805	ENSOARG00000019505	PNKD	100	94.805	Ovis_aries
ENSCGRG00001024071	Pnkd	100	96.104	ENSPPAG00000034969	PNKD	100	96.104	Pan_paniscus
ENSCGRG00001024071	Pnkd	100	91.111	ENSPPRG00000023720	PNKD	100	91.111	Panthera_pardus
ENSCGRG00001024071	Pnkd	100	88.571	ENSPTIG00000021040	PNKD	100	88.571	Panthera_tigris_altaica
ENSCGRG00001024071	Pnkd	100	95.844	ENSPTRG00000012914	PNKD	100	95.844	Pan_troglodytes
ENSCGRG00001024071	Pnkd	100	95.844	ENSPANG00000005752	PNKD	100	95.844	Papio_anubis
ENSCGRG00001024071	Pnkd	97	57.759	ENSPKIG00000011208	pnkd	100	59.434	Paramormyrops_kingsleyae
ENSCGRG00001024071	Pnkd	85	59.804	ENSPMGG00000005169	pnkd	100	59.804	Periophthalmus_magnuspinnatus
ENSCGRG00001024071	Pnkd	100	98.961	ENSPEMG00000010689	Pnkd	100	98.961	Peromyscus_maniculatus_bairdii
ENSCGRG00001024071	Pnkd	85	53.922	ENSPMAG00000006947	pnkd	99	53.922	Petromyzon_marinus
ENSCGRG00001024071	Pnkd	91	79.141	ENSPCIG00000021457	PNKD	90	79.141	Phascolarctos_cinereus
ENSCGRG00001024071	Pnkd	88	62.540	ENSPFOG00000010628	pnkd	95	57.849	Poecilia_formosa
ENSCGRG00001024071	Pnkd	62	66.071	ENSPLAG00000020583	pnkd	95	59.289	Poecilia_latipinna
ENSCGRG00001024071	Pnkd	72	65.251	ENSPMEG00000006542	pnkd	73	59.722	Poecilia_mexicana
ENSCGRG00001024071	Pnkd	88	61.905	ENSPREG00000014434	pnkd	95	57.434	Poecilia_reticulata
ENSCGRG00001024071	Pnkd	100	95.584	ENSPPYG00000013167	PNKD	100	95.584	Pongo_abelii
ENSCGRG00001024071	Pnkd	100	76.364	ENSPCAG00000003946	PNKD	100	76.364	Procavia_capensis
ENSCGRG00001024071	Pnkd	100	96.623	ENSPCOG00000019839	PNKD	100	96.623	Propithecus_coquereli
ENSCGRG00001024071	Pnkd	88	62.264	ENSPNYG00000016327	pnkd	100	62.264	Pundamilia_nyererei
ENSCGRG00001024071	Pnkd	100	58.726	ENSPNAG00000008655	pnkd	100	58.726	Pygocentrus_nattereri
ENSCGRG00001024071	Pnkd	100	98.442	ENSRNOG00000014806	Pnkd	100	98.442	Rattus_norvegicus
ENSCGRG00001024071	Pnkd	100	95.844	ENSRBIG00000031614	PNKD	100	95.844	Rhinopithecus_bieti
ENSCGRG00001024071	Pnkd	100	95.844	ENSRROG00000045542	PNKD	100	95.844	Rhinopithecus_roxellana
ENSCGRG00001024071	Pnkd	100	95.584	ENSSBOG00000036000	PNKD	100	95.584	Saimiri_boliviensis_boliviensis
ENSCGRG00001024071	Pnkd	88	79.751	ENSSHAG00000016339	PNKD	100	79.751	Sarcophilus_harrisii
ENSCGRG00001024071	Pnkd	90	61.846	ENSSFOG00015013028	pnkd	87	61.846	Scleropages_formosus
ENSCGRG00001024071	Pnkd	97	58.120	ENSSMAG00000006812	pnkd	97	56.571	Scophthalmus_maximus
ENSCGRG00001024071	Pnkd	89	60.815	ENSSDUG00000012538	pnkd	99	55.742	Seriola_dumerili
ENSCGRG00001024071	Pnkd	89	60.815	ENSSLDG00000021431	pnkd	86	60.815	Seriola_lalandi_dorsalis
ENSCGRG00001024071	Pnkd	86	49.196	ENSSPUG00000018454	PNKD	98	52.131	Sphenodon_punctatus
ENSCGRG00001024071	Pnkd	89	61.442	ENSSPAG00000007083	pnkd	89	61.442	Stegastes_partitus
ENSCGRG00001024071	Pnkd	100	95.640	ENSSSCG00000029002	PNKD	100	95.325	Sus_scrofa
ENSCGRG00001024071	Pnkd	89	59.875	ENSTRUG00000009399	pnkd	89	59.875	Takifugu_rubripes
ENSCGRG00001024071	Pnkd	97	57.184	ENSTNIG00000010992	pnkd	92	59.819	Tetraodon_nigroviridis
ENSCGRG00001024071	Pnkd	100	93.506	ENSTTRG00000012895	PNKD	100	93.506	Tursiops_truncatus
ENSCGRG00001024071	Pnkd	100	90.833	ENSUAMG00000000289	PNKD	100	90.833	Ursus_americanus
ENSCGRG00001024071	Pnkd	100	79.481	ENSUMAG00000019639	PNKD	100	79.481	Ursus_maritimus
ENSCGRG00001024071	Pnkd	100	95.584	ENSVVUG00000007348	PNKD	100	95.584	Vulpes_vulpes
ENSCGRG00001024071	Pnkd	86	63.666	ENSXETG00000014931	pnkd	99	64.078	Xenopus_tropicalis
ENSCGRG00001024071	Pnkd	86	62.662	ENSXCOG00000014370	pnkd	95	62.662	Xiphophorus_couchianus