EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001024141 (Gene tree)
Gene ID: -
Gene Symbol: Rpusd4
Alias: 2410001E19Rik
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 8804 bases
Position: chrscaffold_30:18353603-18362406
Accession: 100758848
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001027006	PseudoU_synth_2	PF00849.22	1.5e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001031253	-	1953	XM_003502702	ENSCGRP00001027006	377 (aa)	XP_003502750	G3HFJ7

Gene Model

Click here to download ENSCGRG00001024141's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001024141's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001024141	Rpusd4	73	32.203	ENSCGRG00001004923	Rpusd3	78	32.203

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001024141	Rpusd4	100	82.493	ENSG00000165526	RPUSD4	100	82.493	Homo_sapiens
ENSCGRG00001024141	Rpusd4	84	52.469	ENSAPOG00000011024	rpusd4	81	52.469	Acanthochromis_polyacanthus
ENSCGRG00001024141	Rpusd4	100	80.637	ENSAMEG00000000127	-	100	80.637	Ailuropoda_melanoleuca
ENSCGRG00001024141	Rpusd4	83	79.021	ENSAMEG00000005953	-	100	79.021	Ailuropoda_melanoleuca
ENSCGRG00001024141	Rpusd4	88	49.408	ENSACIG00000003533	rpusd4	98	49.408	Amphilophus_citrinellus
ENSCGRG00001024141	Rpusd4	90	50.289	ENSAOCG00000015409	rpusd4	85	50.289	Amphiprion_ocellaris
ENSCGRG00001024141	Rpusd4	90	50.578	ENSAPEG00000018935	rpusd4	85	50.578	Amphiprion_percula
ENSCGRG00001024141	Rpusd4	89	50.882	ENSATEG00000008059	rpusd4	84	50.882	Anabas_testudineus
ENSCGRG00001024141	Rpusd4	73	59.498	ENSAPLG00000013250	RPUSD4	99	58.305	Anas_platyrhynchos
ENSCGRG00001024141	Rpusd4	97	61.141	ENSACAG00000000189	RPUSD4	100	61.141	Anolis_carolinensis
ENSCGRG00001024141	Rpusd4	99	83.333	ENSANAG00000024050	RPUSD4	100	83.333	Aotus_nancymaae
ENSCGRG00001024141	Rpusd4	91	51.009	ENSACLG00000020996	rpusd4	87	51.009	Astatotilapia_calliptera
ENSCGRG00001024141	Rpusd4	96	47.425	ENSAMXG00000031479	rpusd4	95	49.852	Astyanax_mexicanus
ENSCGRG00001024141	Rpusd4	100	76.455	ENSBTAG00000020900	RPUSD4	100	76.455	Bos_taurus
ENSCGRG00001024141	Rpusd4	98	83.514	ENSCJAG00000042850	RPUSD4	93	83.514	Callithrix_jacchus
ENSCGRG00001024141	Rpusd4	100	80.423	ENSCAFG00000010488	RPUSD4	100	80.423	Canis_familiaris
ENSCGRG00001024141	Rpusd4	100	80.423	ENSCAFG00020010621	RPUSD4	100	80.423	Canis_lupus_dingo
ENSCGRG00001024141	Rpusd4	100	76.781	ENSCHIG00000009975	RPUSD4	100	76.781	Capra_hircus
ENSCGRG00001024141	Rpusd4	100	83.289	ENSTSYG00000008456	RPUSD4	100	83.289	Carlito_syrichta
ENSCGRG00001024141	Rpusd4	68	81.008	ENSCAPG00000006040	RPUSD4	100	81.008	Cavia_aperea
ENSCGRG00001024141	Rpusd4	100	81.167	ENSCPOG00000014971	RPUSD4	100	81.167	Cavia_porcellus
ENSCGRG00001024141	Rpusd4	99	83.602	ENSCCAG00000027838	RPUSD4	100	83.602	Cebus_capucinus
ENSCGRG00001024141	Rpusd4	100	81.963	ENSCATG00000041570	RPUSD4	100	81.963	Cercocebus_atys
ENSCGRG00001024141	Rpusd4	100	83.554	ENSCLAG00000016553	RPUSD4	100	83.554	Chinchilla_lanigera
ENSCGRG00001024141	Rpusd4	100	81.432	ENSCSAG00000002274	RPUSD4	100	81.432	Chlorocebus_sabaeus
ENSCGRG00001024141	Rpusd4	75	83.746	ENSCHOG00000010249	RPUSD4	100	83.746	Choloepus_hoffmanni
ENSCGRG00001024141	Rpusd4	75	68.772	ENSCPBG00000011175	RPUSD4	98	68.772	Chrysemys_picta_bellii
ENSCGRG00001024141	Rpusd4	71	42.086	ENSCSAVG00000000872	-	54	42.086	Ciona_savignyi
ENSCGRG00001024141	Rpusd4	100	81.167	ENSCANG00000039684	RPUSD4	100	81.167	Colobus_angolensis_palliatus
ENSCGRG00001024141	Rpusd4	100	100.000	ENSCGRG00000014415	Rpusd4	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001024141	Rpusd4	91	49.725	ENSCVAG00000000392	rpusd4	95	52.071	Cyprinodon_variegatus
ENSCGRG00001024141	Rpusd4	91	49.451	ENSCVAG00000008761	rpusd4	93	49.451	Cyprinodon_variegatus
ENSCGRG00001024141	Rpusd4	85	50.613	ENSDARG00000012674	rpusd4	91	50.613	Danio_rerio
ENSCGRG00001024141	Rpusd4	100	77.454	ENSDNOG00000020026	RPUSD4	100	77.454	Dasypus_novemcinctus
ENSCGRG00001024141	Rpusd4	100	80.902	ENSDORG00000016717	Rpusd4	100	80.902	Dipodomys_ordii
ENSCGRG00001024141	Rpusd4	97	80.055	ENSETEG00000013953	RPUSD4	97	80.055	Echinops_telfairi
ENSCGRG00001024141	Rpusd4	100	81.698	ENSEASG00005022982	RPUSD4	100	81.698	Equus_asinus_asinus
ENSCGRG00001024141	Rpusd4	100	81.432	ENSECAG00000000557	RPUSD4	100	81.432	Equus_caballus
ENSCGRG00001024141	Rpusd4	80	80.435	ENSEEUG00000014036	RPUSD4	80	80.435	Erinaceus_europaeus
ENSCGRG00001024141	Rpusd4	88	54.360	ENSELUG00000008075	rpusd4	90	54.360	Esox_lucius
ENSCGRG00001024141	Rpusd4	100	81.432	ENSFCAG00000029789	RPUSD4	100	81.432	Felis_catus
ENSCGRG00001024141	Rpusd4	89	56.637	ENSFALG00000005171	RPUSD4	99	56.637	Ficedula_albicollis
ENSCGRG00001024141	Rpusd4	100	83.554	ENSFDAG00000014307	RPUSD4	100	83.554	Fukomys_damarensis
ENSCGRG00001024141	Rpusd4	94	49.582	ENSFHEG00000004329	rpusd4	91	49.582	Fundulus_heteroclitus
ENSCGRG00001024141	Rpusd4	85	50.920	ENSGMOG00000017726	rpusd4	96	50.920	Gadus_morhua
ENSCGRG00001024141	Rpusd4	74	61.702	ENSGALG00000024326	RPUSD4	99	55.899	Gallus_gallus
ENSCGRG00001024141	Rpusd4	89	48.256	ENSGAFG00000021559	rpusd4	87	48.256	Gambusia_affinis
ENSCGRG00001024141	Rpusd4	89	50.000	ENSGACG00000001657	rpusd4	100	50.000	Gasterosteus_aculeatus
ENSCGRG00001024141	Rpusd4	95	61.003	ENSGAGG00000000132	RPUSD4	98	61.003	Gopherus_agassizii
ENSCGRG00001024141	Rpusd4	100	81.698	ENSGGOG00000016494	RPUSD4	100	81.698	Gorilla_gorilla
ENSCGRG00001024141	Rpusd4	91	51.009	ENSHBUG00000022838	rpusd4	87	51.009	Haplochromis_burtoni
ENSCGRG00001024141	Rpusd4	100	84.350	ENSHGLG00000002285	RPUSD4	100	84.350	Heterocephalus_glaber_female
ENSCGRG00001024141	Rpusd4	100	84.350	ENSHGLG00100006385	RPUSD4	100	84.350	Heterocephalus_glaber_male
ENSCGRG00001024141	Rpusd4	86	51.524	ENSHCOG00000006612	rpusd4	83	51.524	Hippocampus_comes
ENSCGRG00001024141	Rpusd4	92	51.862	ENSIPUG00000023879	rusd4	90	51.862	Ictalurus_punctatus
ENSCGRG00001024141	Rpusd4	97	83.516	ENSSTOG00000025280	RPUSD4	100	83.516	Ictidomys_tridecemlineatus
ENSCGRG00001024141	Rpusd4	99	87.366	ENSJJAG00000018673	Rpusd4	100	87.366	Jaculus_jaculus
ENSCGRG00001024141	Rpusd4	85	53.374	ENSKMAG00000021805	rpusd4	84	53.374	Kryptolebias_marmoratus
ENSCGRG00001024141	Rpusd4	94	48.000	ENSLBEG00000020394	rpusd4	96	48.000	Labrus_bergylta
ENSCGRG00001024141	Rpusd4	85	61.111	ENSLACG00000011028	RPUSD4	94	57.333	Latimeria_chalumnae
ENSCGRG00001024141	Rpusd4	93	46.348	ENSLOCG00000003124	rpusd4	95	46.348	Lepisosteus_oculatus
ENSCGRG00001024141	Rpusd4	100	80.106	ENSLAFG00000005211	RPUSD4	100	80.106	Loxodonta_africana
ENSCGRG00001024141	Rpusd4	100	81.963	ENSMFAG00000039513	RPUSD4	100	81.963	Macaca_fascicularis
ENSCGRG00001024141	Rpusd4	100	81.698	ENSMMUG00000007933	RPUSD4	100	81.698	Macaca_mulatta
ENSCGRG00001024141	Rpusd4	100	81.698	ENSMNEG00000027414	RPUSD4	100	81.698	Macaca_nemestrina
ENSCGRG00001024141	Rpusd4	100	81.698	ENSMLEG00000042461	RPUSD4	100	81.698	Mandrillus_leucophaeus
ENSCGRG00001024141	Rpusd4	91	48.857	ENSMAMG00000023839	rpusd4	88	48.857	Mastacembelus_armatus
ENSCGRG00001024141	Rpusd4	91	51.009	ENSMZEG00005011999	rpusd4	87	51.009	Maylandia_zebra
ENSCGRG00001024141	Rpusd4	74	59.643	ENSMGAG00000000840	RPUSD4	99	57.099	Meleagris_gallopavo
ENSCGRG00001024141	Rpusd4	100	93.634	ENSMAUG00000010280	Rpusd4	100	93.634	Mesocricetus_auratus
ENSCGRG00001024141	Rpusd4	100	81.432	ENSMICG00000015979	RPUSD4	95	86.624	Microcebus_murinus
ENSCGRG00001024141	Rpusd4	100	90.716	ENSMOCG00000000661	Rpusd4	100	90.716	Microtus_ochrogaster
ENSCGRG00001024141	Rpusd4	78	54.515	ENSMMOG00000021731	rpusd4	88	54.515	Mola_mola
ENSCGRG00001024141	Rpusd4	86	74.540	ENSMODG00000004521	RPUSD4	84	74.540	Monodelphis_domestica
ENSCGRG00001024141	Rpusd4	80	52.597	ENSMALG00000005839	rpusd4	98	51.235	Monopterus_albus
ENSCGRG00001024141	Rpusd4	100	89.920	MGP_CAROLIEiJ_G0031954	Rpusd4	100	89.920	Mus_caroli
ENSCGRG00001024141	Rpusd4	100	89.655	ENSMUSG00000032044	Rpusd4	100	89.655	Mus_musculus
ENSCGRG00001024141	Rpusd4	100	90.186	MGP_PahariEiJ_G0014819	Rpusd4	100	90.186	Mus_pahari
ENSCGRG00001024141	Rpusd4	100	89.390	MGP_SPRETEiJ_G0033078	Rpusd4	100	89.390	Mus_spretus
ENSCGRG00001024141	Rpusd4	99	79.088	ENSMPUG00000006608	RPUSD4	99	79.088	Mustela_putorius_furo
ENSCGRG00001024141	Rpusd4	67	83.858	ENSMLUG00000029348	-	100	83.858	Myotis_lucifugus
ENSCGRG00001024141	Rpusd4	90	83.824	ENSMLUG00000017328	-	97	80.163	Myotis_lucifugus
ENSCGRG00001024141	Rpusd4	99	84.450	ENSNGAG00000020847	Rpusd4	99	84.450	Nannospalax_galili
ENSCGRG00001024141	Rpusd4	86	52.584	ENSNBRG00000005207	rpusd4	95	52.584	Neolamprologus_brichardi
ENSCGRG00001024141	Rpusd4	100	83.289	ENSNLEG00000007465	RPUSD4	100	83.289	Nomascus_leucogenys
ENSCGRG00001024141	Rpusd4	97	69.505	ENSMEUG00000004370	RPUSD4	98	69.505	Notamacropus_eugenii
ENSCGRG00001024141	Rpusd4	70	60.000	ENSOPRG00000013141	-	100	60.000	Ochotona_princeps
ENSCGRG00001024141	Rpusd4	99	81.698	ENSODEG00000004577	RPUSD4	100	81.698	Octodon_degus
ENSCGRG00001024141	Rpusd4	94	51.389	ENSONIG00000018879	rpusd4	96	51.389	Oreochromis_niloticus
ENSCGRG00001024141	Rpusd4	82	67.093	ENSOANG00000007247	RPUSD4	100	67.093	Ornithorhynchus_anatinus
ENSCGRG00001024141	Rpusd4	98	82.527	ENSOCUG00000017039	RPUSD4	98	82.527	Oryctolagus_cuniculus
ENSCGRG00001024141	Rpusd4	93	49.438	ENSORLG00000002750	rpusd4	97	49.438	Oryzias_latipes
ENSCGRG00001024141	Rpusd4	92	48.857	ENSORLG00020002044	rpusd4	83	49.702	Oryzias_latipes_hni
ENSCGRG00001024141	Rpusd4	88	50.298	ENSORLG00015020034	rpusd4	83	50.298	Oryzias_latipes_hsok
ENSCGRG00001024141	Rpusd4	91	50.430	ENSOMEG00000004861	rpusd4	86	50.430	Oryzias_melastigma
ENSCGRG00001024141	Rpusd4	100	79.101	ENSOGAG00000008922	RPUSD4	100	79.101	Otolemur_garnettii
ENSCGRG00001024141	Rpusd4	98	77.297	ENSOARG00000012238	RPUSD4	98	76.944	Ovis_aries
ENSCGRG00001024141	Rpusd4	100	82.759	ENSPPAG00000042883	RPUSD4	93	82.759	Pan_paniscus
ENSCGRG00001024141	Rpusd4	100	81.698	ENSPPRG00000003081	RPUSD4	100	81.698	Panthera_pardus
ENSCGRG00001024141	Rpusd4	100	81.698	ENSPTIG00000012059	RPUSD4	100	81.698	Panthera_tigris_altaica
ENSCGRG00001024141	Rpusd4	100	82.493	ENSPTRG00000004454	RPUSD4	100	82.493	Pan_troglodytes
ENSCGRG00001024141	Rpusd4	100	82.228	ENSPANG00000015040	RPUSD4	100	82.228	Papio_anubis
ENSCGRG00001024141	Rpusd4	89	57.396	ENSPKIG00000023986	rpusd4	86	57.396	Paramormyrops_kingsleyae
ENSCGRG00001024141	Rpusd4	81	66.013	ENSPSIG00000014268	RPUSD4	97	66.013	Pelodiscus_sinensis
ENSCGRG00001024141	Rpusd4	86	50.760	ENSPMGG00000002806	rpusd4	91	50.610	Periophthalmus_magnuspinnatus
ENSCGRG00001024141	Rpusd4	100	84.881	ENSPEMG00000000278	Rpusd4	100	84.881	Peromyscus_maniculatus_bairdii
ENSCGRG00001024141	Rpusd4	81	44.510	ENSPMAG00000008183	rpusd4	97	44.510	Petromyzon_marinus
ENSCGRG00001024141	Rpusd4	97	70.604	ENSPCIG00000010212	RPUSD4	100	70.604	Phascolarctos_cinereus
ENSCGRG00001024141	Rpusd4	89	50.000	ENSPFOG00000019030	rpusd4	90	50.000	Poecilia_formosa
ENSCGRG00001024141	Rpusd4	89	50.581	ENSPLAG00000016848	rpusd4	87	50.581	Poecilia_latipinna
ENSCGRG00001024141	Rpusd4	89	49.419	ENSPMEG00000017534	rpusd4	87	49.419	Poecilia_mexicana
ENSCGRG00001024141	Rpusd4	85	50.760	ENSPREG00000005689	rpusd4	84	50.760	Poecilia_reticulata
ENSCGRG00001024141	Rpusd4	100	82.759	ENSPPYG00000004043	RPUSD4	100	82.759	Pongo_abelii
ENSCGRG00001024141	Rpusd4	80	80.000	ENSPCAG00000000753	RPUSD4	82	80.000	Procavia_capensis
ENSCGRG00001024141	Rpusd4	98	75.202	ENSPCOG00000020694	RPUSD4	100	75.202	Propithecus_coquereli
ENSCGRG00001024141	Rpusd4	98	83.198	ENSPVAG00000000988	RPUSD4	99	83.198	Pteropus_vampyrus
ENSCGRG00001024141	Rpusd4	91	49.856	ENSPNYG00000009652	rpusd4	87	49.856	Pundamilia_nyererei
ENSCGRG00001024141	Rpusd4	88	51.198	ENSPNAG00000012264	rpusd4	88	51.198	Pygocentrus_nattereri
ENSCGRG00001024141	Rpusd4	100	90.186	ENSRNOG00000011567	Rpusd4	100	90.186	Rattus_norvegicus
ENSCGRG00001024141	Rpusd4	100	82.228	ENSRBIG00000034842	RPUSD4	100	82.228	Rhinopithecus_bieti
ENSCGRG00001024141	Rpusd4	100	82.228	ENSRROG00000039753	RPUSD4	100	82.228	Rhinopithecus_roxellana
ENSCGRG00001024141	Rpusd4	99	82.258	ENSSBOG00000030413	RPUSD4	100	82.258	Saimiri_boliviensis_boliviensis
ENSCGRG00001024141	Rpusd4	80	75.415	ENSSHAG00000008304	RPUSD4	99	75.415	Sarcophilus_harrisii
ENSCGRG00001024141	Rpusd4	95	53.168	ENSSFOG00015006203	rpusd4	97	53.168	Scleropages_formosus
ENSCGRG00001024141	Rpusd4	95	48.387	ENSSMAG00000020978	rpusd4	97	48.387	Scophthalmus_maximus
ENSCGRG00001024141	Rpusd4	84	50.464	ENSSDUG00000013399	rpusd4	84	50.464	Seriola_dumerili
ENSCGRG00001024141	Rpusd4	84	50.155	ENSSLDG00000023507	rpusd4	84	50.155	Seriola_lalandi_dorsalis
ENSCGRG00001024141	Rpusd4	91	61.561	ENSSPUG00000001401	RPUSD4	96	62.139	Sphenodon_punctatus
ENSCGRG00001024141	Rpusd4	91	51.862	ENSSPAG00000012163	rpusd4	89	51.862	Stegastes_partitus
ENSCGRG00001024141	Rpusd4	98	81.132	ENSSSCG00000015233	RPUSD4	98	81.132	Sus_scrofa
ENSCGRG00001024141	Rpusd4	79	60.000	ENSTGUG00000000773	RPUSD4	100	60.000	Taeniopygia_guttata
ENSCGRG00001024141	Rpusd4	86	50.909	ENSTRUG00000012283	rpusd4	84	50.909	Takifugu_rubripes
ENSCGRG00001024141	Rpusd4	93	49.020	ENSTNIG00000014676	rpusd4	90	49.020	Tetraodon_nigroviridis
ENSCGRG00001024141	Rpusd4	100	80.106	ENSTTRG00000001555	RPUSD4	100	80.106	Tursiops_truncatus
ENSCGRG00001024141	Rpusd4	100	80.106	ENSUMAG00000002219	RPUSD4	100	80.106	Ursus_maritimus
ENSCGRG00001024141	Rpusd4	70	83.019	ENSVPAG00000001066	RPUSD4	100	83.019	Vicugna_pacos
ENSCGRG00001024141	Rpusd4	100	80.211	ENSVVUG00000020101	RPUSD4	100	80.211	Vulpes_vulpes
ENSCGRG00001024141	Rpusd4	88	50.585	ENSXCOG00000004676	rpusd4	89	50.292	Xiphophorus_couchianus
ENSCGRG00001024141	Rpusd4	88	50.585	ENSXMAG00000023351	rpusd4	87	50.585	Xiphophorus_maculatus