EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001024303 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 7979 bases
Position: chrscaffold_0:126771498-126779476
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001027242	zf-C2H2	PF00096.26	3.5e-67	1	11
ENSCGRP00001027242	zf-C2H2	PF00096.26	3.5e-67	2	11
ENSCGRP00001027242	zf-C2H2	PF00096.26	3.5e-67	3	11
ENSCGRP00001027242	zf-C2H2	PF00096.26	3.5e-67	4	11
ENSCGRP00001027242	zf-C2H2	PF00096.26	3.5e-67	5	11
ENSCGRP00001027242	zf-C2H2	PF00096.26	3.5e-67	6	11
ENSCGRP00001027242	zf-C2H2	PF00096.26	3.5e-67	7	11
ENSCGRP00001027242	zf-C2H2	PF00096.26	3.5e-67	8	11
ENSCGRP00001027242	zf-C2H2	PF00096.26	3.5e-67	9	11
ENSCGRP00001027242	zf-C2H2	PF00096.26	3.5e-67	10	11
ENSCGRP00001027242	zf-C2H2	PF00096.26	3.5e-67	11	11
ENSCGRP00001027239	zf-C2H2	PF00096.26	3.3e-66	1	11
ENSCGRP00001027239	zf-C2H2	PF00096.26	3.3e-66	2	11
ENSCGRP00001027239	zf-C2H2	PF00096.26	3.3e-66	3	11
ENSCGRP00001027239	zf-C2H2	PF00096.26	3.3e-66	4	11
ENSCGRP00001027239	zf-C2H2	PF00096.26	3.3e-66	5	11
ENSCGRP00001027239	zf-C2H2	PF00096.26	3.3e-66	6	11
ENSCGRP00001027239	zf-C2H2	PF00096.26	3.3e-66	7	11
ENSCGRP00001027239	zf-C2H2	PF00096.26	3.3e-66	8	11
ENSCGRP00001027239	zf-C2H2	PF00096.26	3.3e-66	9	11
ENSCGRP00001027239	zf-C2H2	PF00096.26	3.3e-66	10	11
ENSCGRP00001027239	zf-C2H2	PF00096.26	3.3e-66	11	11
ENSCGRP00001027242	zf-met	PF12874.7	3e-06	1	1
ENSCGRP00001027239	zf-met	PF12874.7	2.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001031486	-	1362	-	ENSCGRP00001027239	453 (aa)	-	-
ENSCGRT00001031489	-	1173	-	ENSCGRP00001027242	390 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001024303's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001024303's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001024303	-	99	49.333	ENSCGRG00001000576	Zfp26	89	49.333
ENSCGRG00001024303	-	99	53.774	ENSCGRG00001023858	Zfp560	69	53.774
ENSCGRG00001024303	-	98	49.855	ENSCGRG00001007163	-	100	49.198
ENSCGRG00001024303	-	99	50.216	ENSCGRG00001020646	Gm3854	90	50.216
ENSCGRG00001024303	-	98	49.130	ENSCGRG00001010967	Zfp1	98	39.152
ENSCGRG00001024303	-	98	41.860	ENSCGRG00001007749	Snai1	52	41.860
ENSCGRG00001024303	-	98	52.521	ENSCGRG00001010752	2610008E11Rik	96	46.708
ENSCGRG00001024303	-	99	51.073	ENSCGRG00001015424	-	84	50.388
ENSCGRG00001024303	-	99	48.000	ENSCGRG00001012523	-	98	50.331
ENSCGRG00001024303	-	95	43.860	ENSCGRG00001023314	-	57	47.059
ENSCGRG00001024303	-	98	61.024	ENSCGRG00001024630	-	96	61.024
ENSCGRG00001024303	-	99	42.609	ENSCGRG00001013065	Zfp384	54	42.609
ENSCGRG00001024303	-	99	53.077	ENSCGRG00001012803	-	94	51.902
ENSCGRG00001024303	-	98	43.094	ENSCGRG00001018100	Zfp202	64	43.094
ENSCGRG00001024303	-	99	63.226	ENSCGRG00001019143	-	91	66.111
ENSCGRG00001024303	-	97	51.020	ENSCGRG00001011074	Mynn	55	43.860
ENSCGRG00001024303	-	95	42.222	ENSCGRG00001004071	Patz1	55	33.730
ENSCGRG00001024303	-	99	44.643	ENSCGRG00001013598	Zfp865	79	36.087
ENSCGRG00001024303	-	99	47.222	ENSCGRG00001001639	Zfp882	99	47.222
ENSCGRG00001024303	-	98	42.708	ENSCGRG00001005125	Wt1	56	40.777
ENSCGRG00001024303	-	98	50.903	ENSCGRG00001013561	Zfp768	56	48.387
ENSCGRG00001024303	-	99	46.512	ENSCGRG00001019468	Zfp628	61	47.093
ENSCGRG00001024303	-	96	38.596	ENSCGRG00001019782	Zbtb44	50	38.596
ENSCGRG00001024303	-	96	43.243	ENSCGRG00001010581	Prdm5	93	40.444
ENSCGRG00001024303	-	99	38.519	ENSCGRG00001011389	Snai3	70	38.519
ENSCGRG00001024303	-	98	46.980	ENSCGRG00001004047	-	66	46.784
ENSCGRG00001024303	-	99	42.933	ENSCGRG00001002297	-	100	43.207
ENSCGRG00001024303	-	99	36.637	ENSCGRG00001001429	Zfp574	93	35.657
ENSCGRG00001024303	-	98	42.857	ENSCGRG00001013674	Snai2	52	41.667
ENSCGRG00001024303	-	95	53.333	ENSCGRG00001013279	Zfp784	89	53.333
ENSCGRG00001024303	-	97	39.640	ENSCGRG00001024527	Zic3	51	39.640
ENSCGRG00001024303	-	99	44.012	ENSCGRG00001019408	Zbtb17	59	42.938
ENSCGRG00001024303	-	98	49.815	ENSCGRG00001013602	-	97	49.815
ENSCGRG00001024303	-	99	56.383	ENSCGRG00001013939	Zfp454	98	49.235
ENSCGRG00001024303	-	97	44.828	ENSCGRG00001012398	Zfp236	65	44.828
ENSCGRG00001024303	-	99	52.366	ENSCGRG00001012640	Zfp94	77	51.765
ENSCGRG00001024303	-	99	50.667	ENSCGRG00001011966	Zfp715	82	48.986
ENSCGRG00001024303	-	98	56.039	ENSCGRG00001007115	-	100	56.039
ENSCGRG00001024303	-	99	47.619	ENSCGRG00001006591	Zkscan3	61	47.619
ENSCGRG00001024303	-	98	52.522	ENSCGRG00001017579	Zfp112	85	52.522
ENSCGRG00001024303	-	98	48.062	ENSCGRG00001021088	Zfp354a	98	48.396
ENSCGRG00001024303	-	98	56.150	ENSCGRG00001013367	Zfp61	61	56.150
ENSCGRG00001024303	-	98	36.364	ENSCGRG00001008879	Maz	62	36.429
ENSCGRG00001024303	-	99	54.229	ENSCGRG00001002406	Zfp39	92	54.229
ENSCGRG00001024303	-	98	40.000	ENSCGRG00001009557	Zfp319	98	38.860
ENSCGRG00001024303	-	99	34.868	ENSCGRG00001017330	Repin1	90	34.680

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001024303	-	97	55.814	ENSAOCG00000013672	-	98	53.623	Amphiprion_ocellaris
ENSCGRG00001024303	-	97	50.311	ENSACLG00000008821	-	97	49.302	Astatotilapia_calliptera
ENSCGRG00001024303	-	98	50.196	ENSAMXG00000040677	-	87	50.196	Astyanax_mexicanus
ENSCGRG00001024303	-	97	58.042	ENSAMXG00000037981	-	74	58.042	Astyanax_mexicanus
ENSCGRG00001024303	-	98	53.297	ENSAMXG00000036241	-	94	46.599	Astyanax_mexicanus
ENSCGRG00001024303	-	99	52.459	ENSAMXG00000036633	-	62	54.386	Astyanax_mexicanus
ENSCGRG00001024303	-	97	50.633	ENSAMXG00000043423	-	77	52.090	Astyanax_mexicanus
ENSCGRG00001024303	-	99	54.813	ENSTSYG00000006246	-	99	54.813	Carlito_syrichta
ENSCGRG00001024303	-	99	53.077	ENSCGRG00000009742	-	94	51.902	Cricetulus_griseus_crigri
ENSCGRG00001024303	-	99	93.659	ENSCGRG00000008531	-	99	88.592	Cricetulus_griseus_crigri
ENSCGRG00001024303	-	98	48.889	ENSEBUG00000001121	-	78	48.889	Eptatretus_burgeri
ENSCGRG00001024303	-	98	45.455	ENSEBUG00000015993	-	66	45.455	Eptatretus_burgeri
ENSCGRG00001024303	-	99	47.727	ENSEBUG00000003590	-	77	48.634	Eptatretus_burgeri
ENSCGRG00001024303	-	97	50.000	ENSEBUG00000003236	-	94	49.451	Eptatretus_burgeri
ENSCGRG00001024303	-	99	47.522	ENSEBUG00000017017	-	67	47.522	Eptatretus_burgeri
ENSCGRG00001024303	-	97	48.182	ENSEBUG00000007375	-	87	48.182	Eptatretus_burgeri
ENSCGRG00001024303	-	99	53.175	ENSEBUG00000015834	-	88	53.175	Eptatretus_burgeri
ENSCGRG00001024303	-	99	49.211	ENSIPUG00000013315	-	94	49.211	Ictalurus_punctatus
ENSCGRG00001024303	-	98	61.384	ENSMAUG00000016437	-	100	61.062	Mesocricetus_auratus
ENSCGRG00001024303	-	99	51.923	ENSMAUG00000005691	-	89	51.923	Mesocricetus_auratus
ENSCGRG00001024303	-	99	51.917	ENSMOCG00000000365	-	93	51.917	Microtus_ochrogaster
ENSCGRG00001024303	-	98	54.745	MGP_CAROLIEiJ_G0018683	Zfp493	99	53.281	Mus_caroli
ENSCGRG00001024303	-	99	53.097	MGP_CAROLIEiJ_G0018660	-	76	53.097	Mus_caroli
ENSCGRG00001024303	-	99	61.667	ENSMUSG00000091474	2610021A01Rik	71	61.667	Mus_musculus
ENSCGRG00001024303	-	99	53.992	ENSMUSG00000074824	Rslcan18	80	53.992	Mus_musculus
ENSCGRG00001024303	-	99	60.656	MGP_PahariEiJ_G0012839	-	74	60.656	Mus_pahari
ENSCGRG00001024303	-	99	53.392	MGP_SPRETEiJ_G0019543	-	78	53.392	Mus_spretus
ENSCGRG00001024303	-	97	44.767	ENSPMAG00000000404	-	99	45.029	Petromyzon_marinus
ENSCGRG00001024303	-	97	53.846	ENSPNAG00000003017	-	94	53.846	Pygocentrus_nattereri
ENSCGRG00001024303	-	97	53.390	ENSPNAG00000014492	-	91	53.390	Pygocentrus_nattereri
ENSCGRG00001024303	-	99	55.858	ENSSSCG00000040389	-	98	57.609	Sus_scrofa
ENSCGRG00001024303	-	97	31.852	ENSTRUG00000014476	-	92	34.264	Takifugu_rubripes