EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001024315 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 10504 bases
Position: chrscaffold_0:201172400-201182903
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001027267	RRM_1	PF00076.22	2.4e-59	1	4
ENSCGRP00001027267	RRM_1	PF00076.22	2.4e-59	2	4
ENSCGRP00001027267	RRM_1	PF00076.22	2.4e-59	3	4
ENSCGRP00001027267	RRM_1	PF00076.22	2.4e-59	4	4
ENSCGRP00001027264	RRM_1	PF00076.22	2.5e-59	1	4
ENSCGRP00001027264	RRM_1	PF00076.22	2.5e-59	2	4
ENSCGRP00001027264	RRM_1	PF00076.22	2.5e-59	3	4
ENSCGRP00001027264	RRM_1	PF00076.22	2.5e-59	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001031514	-	2142	-	ENSCGRP00001027267	713 (aa)	-	-
ENSCGRT00001031511	-	2148	-	ENSCGRP00001027264	715 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001024315's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001024315's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001024315	-	92	81.459	ENSCGRG00001022350	-	95	81.651
ENSCGRG00001024315	-	51	30.409	ENSCGRG00001012762	Tial1	72	30.357

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001024315	-	91	81.583	ENSG00000115053	NCL	89	92.063	Homo_sapiens
ENSCGRG00001024315	-	53	88.654	ENSAMEG00000016289	NCL	92	80.728	Ailuropoda_melanoleuca
ENSCGRG00001024315	-	91	79.756	ENSANAG00000035814	-	92	81.583	Aotus_nancymaae
ENSCGRG00001024315	-	99	64.781	ENSANAG00000024378	-	81	82.576	Aotus_nancymaae
ENSCGRG00001024315	-	75	87.448	ENSBTAG00000026909	-	87	87.815	Bos_taurus
ENSCGRG00001024315	-	94	75.181	ENSBTAG00000016174	NCL	92	79.429	Bos_taurus
ENSCGRG00001024315	-	89	87.619	ENSBTAG00000051320	-	83	87.324	Bos_taurus
ENSCGRG00001024315	-	91	86.420	ENSBTAG00000050728	-	87	86.420	Bos_taurus
ENSCGRG00001024315	-	91	77.912	ENSCJAG00000013538	NCL	92	79.909	Callithrix_jacchus
ENSCGRG00001024315	-	91	81.791	ENSCAFG00000011037	NCL	92	81.487	Canis_familiaris
ENSCGRG00001024315	-	84	81.023	ENSCAFG00020023145	NCL	89	80.693	Canis_lupus_dingo
ENSCGRG00001024315	-	68	92.070	ENSCHIG00000021052	-	51	92.070	Capra_hircus
ENSCGRG00001024315	-	91	71.342	ENSCHIG00000026149	-	93	73.454	Capra_hircus
ENSCGRG00001024315	-	91	59.969	ENSCHIG00000012143	-	92	69.055	Capra_hircus
ENSCGRG00001024315	-	84	77.325	ENSCHIG00000010894	-	91	79.772	Capra_hircus
ENSCGRG00001024315	-	91	81.364	ENSTSYG00000004355	-	92	80.728	Carlito_syrichta
ENSCGRG00001024315	-	71	80.488	ENSTSYG00000036886	-	91	70.489	Carlito_syrichta
ENSCGRG00001024315	-	93	77.211	ENSTSYG00000029779	-	98	76.923	Carlito_syrichta
ENSCGRG00001024315	-	53	83.113	ENSCAPG00000009405	NCL	91	75.385	Cavia_aperea
ENSCGRG00001024315	-	53	88.127	ENSCPOG00000001034	NCL	92	78.506	Cavia_porcellus
ENSCGRG00001024315	-	64	86.935	ENSCCAG00000000551	-	76	87.065	Cebus_capucinus
ENSCGRG00001024315	-	53	89.182	ENSCCAG00000021040	-	92	81.860	Cebus_capucinus
ENSCGRG00001024315	-	91	82.927	ENSCATG00000037033	NCL	92	83.537	Cercocebus_atys
ENSCGRG00001024315	-	91	79.456	ENSCLAG00000013080	NCL	92	77.812	Chinchilla_lanigera
ENSCGRG00001024315	-	53	88.947	ENSCSAG00000006660	NCL	82	88.918	Chlorocebus_sabaeus
ENSCGRG00001024315	-	61	71.429	ENSCHOG00000012860	NCL	88	71.034	Choloepus_hoffmanni
ENSCGRG00001024315	-	97	98.567	ENSCGRG00000017894	-	100	98.567	Cricetulus_griseus_crigri
ENSCGRG00001024315	-	92	79.179	ENSCGRG00000000507	-	93	78.593	Cricetulus_griseus_crigri
ENSCGRG00001024315	-	91	72.324	ENSDNOG00000046347	-	91	72.018	Dasypus_novemcinctus
ENSCGRG00001024315	-	91	78.517	ENSDNOG00000010783	-	92	78.517	Dasypus_novemcinctus
ENSCGRG00001024315	-	53	87.831	ENSDORG00000012513	-	91	80.153	Dipodomys_ordii
ENSCGRG00001024315	-	51	77.260	ENSDORG00000023596	-	92	71.894	Dipodomys_ordii
ENSCGRG00001024315	-	60	57.968	ENSETEG00000008553	-	88	57.666	Echinops_telfairi
ENSCGRG00001024315	-	53	84.433	ENSETEG00000018937	-	85	75.530	Echinops_telfairi
ENSCGRG00001024315	-	53	83.820	ENSETEG00000014756	-	86	83.905	Echinops_telfairi
ENSCGRG00001024315	-	74	60.326	ENSETEG00000008139	-	89	60.163	Echinops_telfairi
ENSCGRG00001024315	-	89	80.000	ENSEASG00005008488	NCL	91	80.620	Equus_asinus_asinus
ENSCGRG00001024315	-	91	80.787	ENSECAG00000021868	NCL	92	81.392	Equus_caballus
ENSCGRG00001024315	-	85	77.558	ENSEEUG00000005913	NCL	85	77.759	Erinaceus_europaeus
ENSCGRG00001024315	-	91	82.727	ENSFCAG00000027622	NCL	92	82.121	Felis_catus
ENSCGRG00001024315	-	90	83.002	ENSFDAG00000014291	NCL	92	82.542	Fukomys_damarensis
ENSCGRG00001024315	-	91	80.974	ENSGGOG00000004300	NCL	92	80.974	Gorilla_gorilla
ENSCGRG00001024315	-	91	82.675	ENSHGLG00000002031	-	92	81.611	Heterocephalus_glaber_female
ENSCGRG00001024315	-	91	74.654	ENSHGLG00000011069	-	62	78.032	Heterocephalus_glaber_female
ENSCGRG00001024315	-	57	80.000	ENSHGLG00000005133	-	82	80.088	Heterocephalus_glaber_female
ENSCGRG00001024315	-	72	80.533	ENSHGLG00100000745	-	82	80.637	Heterocephalus_glaber_male
ENSCGRG00001024315	-	91	83.053	ENSHGLG00100014537	-	92	81.832	Heterocephalus_glaber_male
ENSCGRG00001024315	-	53	85.979	ENSJJAG00000016165	Ncl	91	82.663	Jaculus_jaculus
ENSCGRG00001024315	-	91	68.550	ENSLAFG00000013061	NCL	91	67.278	Loxodonta_africana
ENSCGRG00001024315	-	91	82.648	ENSMFAG00000040385	NCL	92	83.257	Macaca_fascicularis
ENSCGRG00001024315	-	91	82.648	ENSMMUG00000018094	NCL	92	83.257	Macaca_mulatta
ENSCGRG00001024315	-	54	94.091	ENSMNEG00000023839	NCL	64	84.615	Macaca_nemestrina
ENSCGRG00001024315	-	91	82.774	ENSMLEG00000028935	NCL	92	83.384	Mandrillus_leucophaeus
ENSCGRG00001024315	-	91	66.412	ENSMICG00000029975	-	87	80.142	Microcebus_murinus
ENSCGRG00001024315	-	91	80.945	ENSMICG00000002538	-	92	81.098	Microcebus_murinus
ENSCGRG00001024315	-	91	86.810	MGP_CAROLIEiJ_G0014362	Ncl	92	86.810	Mus_caroli
ENSCGRG00001024315	-	91	87.423	ENSMUSG00000026234	Ncl	92	87.423	Mus_musculus
ENSCGRG00001024315	-	91	87.768	MGP_PahariEiJ_G0027599	Ncl	92	87.156	Mus_pahari
ENSCGRG00001024315	-	91	86.064	MGP_SPRETEiJ_G0015164	Ncl	92	86.217	Mus_spretus
ENSCGRG00001024315	-	91	77.492	ENSMLUG00000014547	NCL	92	78.064	Myotis_lucifugus
ENSCGRG00001024315	-	52	80.214	ENSNGAG00000006188	-	54	79.101	Nannospalax_galili
ENSCGRG00001024315	-	91	87.860	ENSNGAG00000002454	-	91	86.778	Nannospalax_galili
ENSCGRG00001024315	-	85	68.727	ENSNLEG00000014107	-	85	69.763	Nomascus_leucogenys
ENSCGRG00001024315	-	90	61.181	ENSODEG00000007803	-	90	60.823	Octodon_degus
ENSCGRG00001024315	-	70	70.659	ENSODEG00000002441	-	89	63.291	Octodon_degus
ENSCGRG00001024315	-	92	76.772	ENSODEG00000003281	-	92	75.455	Octodon_degus
ENSCGRG00001024315	-	91	74.080	ENSOCUG00000004312	NCL	91	73.466	Oryctolagus_cuniculus
ENSCGRG00001024315	-	61	84.793	ENSOARG00000013710	-	94	73.147	Ovis_aries
ENSCGRG00001024315	-	62	72.360	ENSOARG00000004072	-	71	73.059	Ovis_aries
ENSCGRG00001024315	-	90	73.820	ENSOARG00000020709	-	92	75.573	Ovis_aries
ENSCGRG00001024315	-	87	62.676	ENSOARG00000013270	-	100	62.329	Ovis_aries
ENSCGRG00001024315	-	91	81.887	ENSPPAG00000011619	NCL	92	82.040	Pan_paniscus
ENSCGRG00001024315	-	91	82.398	ENSPPRG00000012603	NCL	92	81.791	Panthera_pardus
ENSCGRG00001024315	-	90	82.083	ENSPTIG00000010393	NCL	91	81.470	Panthera_tigris_altaica
ENSCGRG00001024315	-	91	82.067	ENSPTRG00000013025	NCL	92	81.003	Pan_troglodytes
ENSCGRG00001024315	-	91	82.648	ENSPANG00000010292	NCL	92	83.257	Papio_anubis
ENSCGRG00001024315	-	91	75.375	ENSPPYG00000013265	NCL	92	75.526	Pongo_abelii
ENSCGRG00001024315	-	91	82.371	ENSPCOG00000003051	-	91	81.611	Propithecus_coquereli
ENSCGRG00001024315	-	91	77.538	ENSPCOG00000004160	-	94	76.380	Propithecus_coquereli
ENSCGRG00001024315	-	91	81.679	ENSPVAG00000000297	NCL	92	81.527	Pteropus_vampyrus
ENSCGRG00001024315	-	91	86.910	ENSRNOG00000018273	Ncl	92	86.910	Rattus_norvegicus
ENSCGRG00001024315	-	67	91.003	ENSRBIG00000035396	-	88	89.262	Rhinopithecus_bieti
ENSCGRG00001024315	-	94	77.949	ENSRROG00000036103	-	99	81.290	Rhinopithecus_roxellana
ENSCGRG00001024315	-	91	81.887	ENSRROG00000028756	-	91	82.192	Rhinopithecus_roxellana
ENSCGRG00001024315	-	61	78.182	ENSSBOG00000027549	-	91	74.809	Saimiri_boliviensis_boliviensis
ENSCGRG00001024315	-	91	81.184	ENSSBOG00000029193	-	92	81.791	Saimiri_boliviensis_boliviensis
ENSCGRG00001024315	-	91	79.880	ENSSSCG00000016275	NCL	92	79.880	Sus_scrofa
ENSCGRG00001024315	-	65	74.221	ENSTBEG00000002469	-	67	74.000	Tupaia_belangeri
ENSCGRG00001024315	-	55	76.517	ENSTBEG00000001546	-	85	73.443	Tupaia_belangeri
ENSCGRG00001024315	-	91	80.091	ENSTTRG00000009094	NCL	91	80.335	Tursiops_truncatus
ENSCGRG00001024315	-	67	88.684	ENSUAMG00000005639	NCL	88	83.296	Ursus_americanus
ENSCGRG00001024315	-	53	88.918	ENSUMAG00000015789	NCL	92	80.793	Ursus_maritimus
ENSCGRG00001024315	-	68	86.620	ENSVPAG00000001796	NCL	69	86.620	Vicugna_pacos
ENSCGRG00001024315	-	91	80.458	ENSVVUG00000025564	NCL	91	79.755	Vulpes_vulpes