EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001024441 (Gene tree)
Gene ID: -
Gene Symbol: Trub2
Alias: G430055L02Rik
Full Name: TruB pseudouridine synthase family member 2
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 27541 bases
Position: chrscaffold_3:117697832-117725372
Accession: 100766452
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001027432	TruB_N	PF01509.18	6.3e-27	1	1
ENSCGRP00001027436	TruB_N	PF01509.18	3.2e-15	1	1
ENSCGRP00001027427	TruB_N	PF01509.18	1.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001031674	-	615	-	ENSCGRP00001027427	204 (aa)	-	-
ENSCGRT00001031679	-	4363	-	ENSCGRP00001027432	331 (aa)	XP_003511844	UPI00022F62EE
ENSCGRT00001031683	-	561	-	ENSCGRP00001027436	186 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001024441's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001024441's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001024441	Trub2	63	31.250	ENSCGRG00001010322	-	54	31.250
ENSCGRG00001024441	Trub2	63	31.100	ENSCGRG00001016772	-	65	31.658

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001024441	Trub2	100	79.154	ENSG00000167112	TRUB2	100	79.154	Homo_sapiens
ENSCGRG00001024441	Trub2	84	43.525	ENSAPOG00000018284	-	76	57.664	Acanthochromis_polyacanthus
ENSCGRG00001024441	Trub2	62	56.098	ENSAPOG00000015733	trub2	74	56.098	Acanthochromis_polyacanthus
ENSCGRG00001024441	Trub2	96	82.584	ENSAMEG00000015395	TRUB2	99	79.091	Ailuropoda_melanoleuca
ENSCGRG00001024441	Trub2	92	47.674	ENSACIG00000016500	trub2	84	51.799	Amphilophus_citrinellus
ENSCGRG00001024441	Trub2	92	50.000	ENSAOCG00000002330	trub2	82	54.676	Amphiprion_ocellaris
ENSCGRG00001024441	Trub2	92	50.581	ENSAPEG00000013177	trub2	82	55.036	Amphiprion_percula
ENSCGRG00001024441	Trub2	92	51.163	ENSATEG00000011371	trub2	88	54.286	Anabas_testudineus
ENSCGRG00001024441	Trub2	89	57.432	ENSAPLG00000009254	TRUB2	95	57.912	Anas_platyrhynchos
ENSCGRG00001024441	Trub2	98	58.951	ENSACAG00000007331	TRUB2	96	58.951	Anolis_carolinensis
ENSCGRG00001024441	Trub2	96	83.146	ENSANAG00000036234	TRUB2	100	82.315	Aotus_nancymaae
ENSCGRG00001024441	Trub2	91	48.538	ENSACLG00000010793	trub2	84	52.158	Astatotilapia_calliptera
ENSCGRG00001024441	Trub2	92	52.601	ENSAMXG00000031679	trub2	80	55.714	Astyanax_mexicanus
ENSCGRG00001024441	Trub2	64	69.907	ENSBTAG00000055269	-	96	69.907	Bos_taurus
ENSCGRG00001024441	Trub2	88	81.098	ENSBTAG00000004663	TRUB2	100	81.098	Bos_taurus
ENSCGRG00001024441	Trub2	96	84.270	ENSCJAG00000020009	TRUB2	100	80.060	Callithrix_jacchus
ENSCGRG00001024441	Trub2	99	80.000	ENSCAFG00000020068	TRUB2	99	80.000	Canis_familiaris
ENSCGRG00001024441	Trub2	96	82.584	ENSCAFG00020017325	-	100	83.146	Canis_lupus_dingo
ENSCGRG00001024441	Trub2	99	81.212	ENSCHIG00000021160	TRUB2	99	81.212	Capra_hircus
ENSCGRG00001024441	Trub2	99	84.098	ENSTSYG00000034163	TRUB2	99	84.098	Carlito_syrichta
ENSCGRG00001024441	Trub2	86	80.769	ENSCAPG00000000223	TRUB2	97	80.769	Cavia_aperea
ENSCGRG00001024441	Trub2	96	84.270	ENSCPOG00000013535	TRUB2	97	80.495	Cavia_porcellus
ENSCGRG00001024441	Trub2	96	83.146	ENSCCAG00000026531	-	98	80.938	Cebus_capucinus
ENSCGRG00001024441	Trub2	98	76.615	ENSCCAG00000028463	-	98	76.852	Cebus_capucinus
ENSCGRG00001024441	Trub2	100	78.852	ENSCATG00000038234	TRUB2	100	78.852	Cercocebus_atys
ENSCGRG00001024441	Trub2	98	82.418	ENSCLAG00000001702	TRUB2	99	82.154	Chinchilla_lanigera
ENSCGRG00001024441	Trub2	99	75.227	ENSCSAG00000014117	TRUB2	99	75.227	Chlorocebus_sabaeus
ENSCGRG00001024441	Trub2	100	80.060	ENSCHOG00000001555	TRUB2	100	80.060	Choloepus_hoffmanni
ENSCGRG00001024441	Trub2	99	58.967	ENSCPBG00000025186	TRUB2	95	58.967	Chrysemys_picta_bellii
ENSCGRG00001024441	Trub2	91	33.140	ENSCSAVG00000003930	-	90	32.082	Ciona_savignyi
ENSCGRG00001024441	Trub2	100	71.903	ENSCANG00000016135	TRUB2	100	71.903	Colobus_angolensis_palliatus
ENSCGRG00001024441	Trub2	100	100.000	ENSCGRG00000005633	Trub2	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001024441	Trub2	91	50.292	ENSCSEG00000001331	trub2	83	52.518	Cynoglossus_semilaevis
ENSCGRG00001024441	Trub2	90	49.704	ENSCVAG00000009901	trub2	83	53.069	Cyprinodon_variegatus
ENSCGRG00001024441	Trub2	95	50.847	ENSDARG00000028379	trub2	79	52.878	Danio_rerio
ENSCGRG00001024441	Trub2	91	57.285	ENSDNOG00000043967	-	92	57.285	Dasypus_novemcinctus
ENSCGRG00001024441	Trub2	99	79.511	ENSDNOG00000045679	-	99	79.511	Dasypus_novemcinctus
ENSCGRG00001024441	Trub2	99	81.571	ENSDORG00000016222	Trub2	99	81.571	Dipodomys_ordii
ENSCGRG00001024441	Trub2	81	32.721	FBgn0033060	CG7849	85	32.721	Drosophila_melanogaster
ENSCGRG00001024441	Trub2	100	76.435	ENSETEG00000009114	TRUB2	100	76.435	Echinops_telfairi
ENSCGRG00001024441	Trub2	90	36.957	ENSEBUG00000015723	trub2	81	46.575	Eptatretus_burgeri
ENSCGRG00001024441	Trub2	100	80.665	ENSEASG00005016819	TRUB2	100	80.665	Equus_asinus_asinus
ENSCGRG00001024441	Trub2	100	81.269	ENSECAG00000023520	TRUB2	100	81.269	Equus_caballus
ENSCGRG00001024441	Trub2	95	83.616	ENSEEUG00000008908	TRUB2	98	81.308	Erinaceus_europaeus
ENSCGRG00001024441	Trub2	91	50.543	ENSELUG00000002376	trub2	97	51.290	Esox_lucius
ENSCGRG00001024441	Trub2	96	82.778	ENSFCAG00000005839	TRUB2	100	77.778	Felis_catus
ENSCGRG00001024441	Trub2	80	62.879	ENSFALG00000001364	TRUB2	85	63.636	Ficedula_albicollis
ENSCGRG00001024441	Trub2	100	80.645	ENSFDAG00000021374	TRUB2	99	80.303	Fukomys_damarensis
ENSCGRG00001024441	Trub2	86	47.222	ENSFHEG00000014655	trub2	85	47.222	Fundulus_heteroclitus
ENSCGRG00001024441	Trub2	91	38.235	ENSGMOG00000000981	trub2	92	45.290	Gadus_morhua
ENSCGRG00001024441	Trub2	90	61.074	ENSGALG00000004920	TRUB2	73	61.074	Gallus_gallus
ENSCGRG00001024441	Trub2	91	49.412	ENSGAFG00000010107	trub2	87	51.370	Gambusia_affinis
ENSCGRG00001024441	Trub2	97	49.689	ENSGACG00000001476	trub2	95	49.689	Gasterosteus_aculeatus
ENSCGRG00001024441	Trub2	91	63.529	ENSGAGG00000022872	TRUB2	86	65.862	Gopherus_agassizii
ENSCGRG00001024441	Trub2	100	79.154	ENSGGOG00000014780	TRUB2	100	79.154	Gorilla_gorilla
ENSCGRG00001024441	Trub2	91	48.538	ENSHBUG00000022384	trub2	84	52.878	Haplochromis_burtoni
ENSCGRG00001024441	Trub2	99	80.000	ENSHGLG00000016715	TRUB2	99	80.000	Heterocephalus_glaber_female
ENSCGRG00001024441	Trub2	99	80.000	ENSHGLG00100016548	TRUB2	99	80.000	Heterocephalus_glaber_male
ENSCGRG00001024441	Trub2	93	51.149	ENSHCOG00000017748	trub2	85	54.676	Hippocampus_comes
ENSCGRG00001024441	Trub2	99	80.734	ENSSTOG00000022617	-	99	80.734	Ictidomys_tridecemlineatus
ENSCGRG00001024441	Trub2	100	80.665	ENSSTOG00000008024	-	100	80.665	Ictidomys_tridecemlineatus
ENSCGRG00001024441	Trub2	98	76.543	ENSJJAG00000019181	Trub2	98	76.543	Jaculus_jaculus
ENSCGRG00001024441	Trub2	91	49.412	ENSKMAG00000007861	trub2	83	53.069	Kryptolebias_marmoratus
ENSCGRG00001024441	Trub2	92	52.023	ENSLBEG00000000907	trub2	83	53.571	Labrus_bergylta
ENSCGRG00001024441	Trub2	91	62.130	ENSLACG00000001515	TRUB2	85	63.636	Latimeria_chalumnae
ENSCGRG00001024441	Trub2	91	56.977	ENSLOCG00000000885	trub2	95	57.388	Lepisosteus_oculatus
ENSCGRG00001024441	Trub2	96	82.584	ENSLAFG00000002174	TRUB2	100	83.828	Loxodonta_africana
ENSCGRG00001024441	Trub2	100	79.154	ENSMFAG00000000881	TRUB2	100	79.154	Macaca_fascicularis
ENSCGRG00001024441	Trub2	96	83.146	ENSMMUG00000014146	TRUB2	100	78.852	Macaca_mulatta
ENSCGRG00001024441	Trub2	96	83.146	ENSMNEG00000011189	TRUB2	100	78.852	Macaca_nemestrina
ENSCGRG00001024441	Trub2	100	78.852	ENSMLEG00000037270	TRUB2	100	78.852	Mandrillus_leucophaeus
ENSCGRG00001024441	Trub2	92	50.000	ENSMAMG00000023643	trub2	92	53.957	Mastacembelus_armatus
ENSCGRG00001024441	Trub2	91	48.538	ENSMZEG00005016018	trub2	84	52.518	Maylandia_zebra
ENSCGRG00001024441	Trub2	60	66.834	ENSMGAG00000003894	TRUB2	99	66.834	Meleagris_gallopavo
ENSCGRG00001024441	Trub2	100	95.588	ENSMAUG00000010403	Trub2	100	95.588	Mesocricetus_auratus
ENSCGRG00001024441	Trub2	99	80.303	ENSMICG00000047032	TRUB2	99	80.303	Microcebus_murinus
ENSCGRG00001024441	Trub2	100	91.176	ENSMOCG00000014291	Trub2	100	91.176	Microtus_ochrogaster
ENSCGRG00001024441	Trub2	92	54.335	ENSMMOG00000021674	trub2	86	55.197	Mola_mola
ENSCGRG00001024441	Trub2	95	67.614	ENSMODG00000005940	TRUB2	99	72.603	Monodelphis_domestica
ENSCGRG00001024441	Trub2	92	51.429	ENSMALG00000021231	trub2	83	54.804	Monopterus_albus
ENSCGRG00001024441	Trub2	100	89.426	MGP_CAROLIEiJ_G0023368	Trub2	100	89.426	Mus_caroli
ENSCGRG00001024441	Trub2	100	89.124	ENSMUSG00000039826	Trub2	100	89.124	Mus_musculus
ENSCGRG00001024441	Trub2	100	88.520	MGP_PahariEiJ_G0024826	Trub2	100	88.520	Mus_pahari
ENSCGRG00001024441	Trub2	100	89.124	MGP_SPRETEiJ_G0024286	Trub2	100	89.124	Mus_spretus
ENSCGRG00001024441	Trub2	100	78.248	ENSMPUG00000013206	TRUB2	91	78.248	Mustela_putorius_furo
ENSCGRG00001024441	Trub2	99	80.000	ENSMLUG00000005256	TRUB2	99	80.000	Myotis_lucifugus
ENSCGRG00001024441	Trub2	99	86.970	ENSNGAG00000018679	Trub2	99	86.970	Nannospalax_galili
ENSCGRG00001024441	Trub2	91	48.538	ENSNBRG00000016294	trub2	84	52.158	Neolamprologus_brichardi
ENSCGRG00001024441	Trub2	100	78.248	ENSNLEG00000017556	TRUB2	100	78.248	Nomascus_leucogenys
ENSCGRG00001024441	Trub2	96	70.787	ENSMEUG00000000484	TRUB2	95	74.662	Notamacropus_eugenii
ENSCGRG00001024441	Trub2	99	79.091	ENSOPRG00000001981	TRUB2	100	79.091	Ochotona_princeps
ENSCGRG00001024441	Trub2	98	79.755	ENSODEG00000017292	TRUB2	99	79.755	Octodon_degus
ENSCGRG00001024441	Trub2	91	49.123	ENSONIG00000004230	trub2	84	52.518	Oreochromis_niloticus
ENSCGRG00001024441	Trub2	77	76.389	ENSOANG00000029023	-	83	77.005	Ornithorhynchus_anatinus
ENSCGRG00001024441	Trub2	99	81.763	ENSOCUG00000026296	TRUB2	91	81.873	Oryctolagus_cuniculus
ENSCGRG00001024441	Trub2	91	49.123	ENSORLG00000020011	trub2	89	50.842	Oryzias_latipes
ENSCGRG00001024441	Trub2	91	49.412	ENSORLG00020011028	trub2	86	51.014	Oryzias_latipes_hni
ENSCGRG00001024441	Trub2	91	49.412	ENSORLG00015007494	trub2	90	51.014	Oryzias_latipes_hsok
ENSCGRG00001024441	Trub2	92	52.326	ENSOMEG00000006702	trub2	84	54.676	Oryzias_melastigma
ENSCGRG00001024441	Trub2	84	80.769	ENSOGAG00000003511	-	95	80.769	Otolemur_garnettii
ENSCGRG00001024441	Trub2	76	79.681	ENSOARG00000003785	-	99	79.681	Ovis_aries
ENSCGRG00001024441	Trub2	99	80.909	ENSOARG00000010579	-	99	80.909	Ovis_aries
ENSCGRG00001024441	Trub2	100	79.154	ENSPPAG00000043146	TRUB2	100	79.154	Pan_paniscus
ENSCGRG00001024441	Trub2	96	82.778	ENSPPRG00000006307	TRUB2	100	77.778	Panthera_pardus
ENSCGRG00001024441	Trub2	96	82.222	ENSPTIG00000012366	TRUB2	100	77.477	Panthera_tigris_altaica
ENSCGRG00001024441	Trub2	100	78.852	ENSPTRG00000052151	-	100	78.852	Pan_troglodytes
ENSCGRG00001024441	Trub2	100	78.852	ENSPTRG00000021423	TRUB2	100	78.852	Pan_troglodytes
ENSCGRG00001024441	Trub2	100	79.154	ENSPANG00000025856	TRUB2	100	79.154	Papio_anubis
ENSCGRG00001024441	Trub2	91	52.353	ENSPKIG00000019769	trub2	91	53.047	Paramormyrops_kingsleyae
ENSCGRG00001024441	Trub2	90	61.279	ENSPSIG00000015701	TRUB2	98	61.279	Pelodiscus_sinensis
ENSCGRG00001024441	Trub2	96	49.171	ENSPMGG00000010206	trub2	90	50.871	Periophthalmus_magnuspinnatus
ENSCGRG00001024441	Trub2	100	90.909	ENSPEMG00000017893	Trub2	100	90.909	Peromyscus_maniculatus_bairdii
ENSCGRG00001024441	Trub2	96	71.348	ENSPCIG00000026731	TRUB2	99	72.204	Phascolarctos_cinereus
ENSCGRG00001024441	Trub2	91	50.000	ENSPFOG00000018018	trub2	75	51.943	Poecilia_formosa
ENSCGRG00001024441	Trub2	91	49.412	ENSPLAG00000010484	trub2	81	51.590	Poecilia_latipinna
ENSCGRG00001024441	Trub2	91	50.000	ENSPMEG00000012913	trub2	84	51.943	Poecilia_mexicana
ENSCGRG00001024441	Trub2	91	48.235	ENSPREG00000002549	trub2	84	50.883	Poecilia_reticulata
ENSCGRG00001024441	Trub2	98	79.141	ENSPPYG00000019650	TRUB2	100	79.141	Pongo_abelii
ENSCGRG00001024441	Trub2	100	79.456	ENSPCAG00000015068	TRUB2	100	79.456	Procavia_capensis
ENSCGRG00001024441	Trub2	100	81.269	ENSPCOG00000017100	TRUB2	100	81.269	Propithecus_coquereli
ENSCGRG00001024441	Trub2	90	83.165	ENSPVAG00000001224	TRUB2	99	83.165	Pteropus_vampyrus
ENSCGRG00001024441	Trub2	91	48.538	ENSPNYG00000013666	trub2	84	52.518	Pundamilia_nyererei
ENSCGRG00001024441	Trub2	98	48.923	ENSPNAG00000017292	trub2	92	48.923	Pygocentrus_nattereri
ENSCGRG00001024441	Trub2	96	88.764	ENSRNOG00000043189	Trub2	98	88.050	Rattus_norvegicus
ENSCGRG00001024441	Trub2	100	71.903	ENSRBIG00000006965	TRUB2	100	71.903	Rhinopithecus_bieti
ENSCGRG00001024441	Trub2	100	79.758	ENSRROG00000042928	TRUB2	100	79.758	Rhinopithecus_roxellana
ENSCGRG00001024441	Trub2	96	82.584	ENSSBOG00000022439	TRUB2	98	80.061	Saimiri_boliviensis_boliviensis
ENSCGRG00001024441	Trub2	91	52.663	ENSSFOG00015013391	trub2	89	55.396	Scleropages_formosus
ENSCGRG00001024441	Trub2	96	51.411	ENSSMAG00000020820	trub2	96	51.411	Scophthalmus_maximus
ENSCGRG00001024441	Trub2	92	50.000	ENSSDUG00000016928	trub2	83	53.597	Seriola_dumerili
ENSCGRG00001024441	Trub2	92	50.581	ENSSLDG00000024701	trub2	83	53.957	Seriola_lalandi_dorsalis
ENSCGRG00001024441	Trub2	96	56.667	ENSSPUG00000015515	TRUB2	90	60.000	Sphenodon_punctatus
ENSCGRG00001024441	Trub2	91	51.176	ENSSPAG00000017865	trub2	84	55.714	Stegastes_partitus
ENSCGRG00001024441	Trub2	100	80.967	ENSSSCG00000005645	TRUB2	99	81.293	Sus_scrofa
ENSCGRG00001024441	Trub2	79	64.751	ENSTGUG00000003704	TRUB2	99	64.751	Taeniopygia_guttata
ENSCGRG00001024441	Trub2	93	43.678	ENSTRUG00000015499	trub2	86	49.286	Takifugu_rubripes
ENSCGRG00001024441	Trub2	93	48.295	ENSTNIG00000014721	trub2	96	51.957	Tetraodon_nigroviridis
ENSCGRG00001024441	Trub2	68	76.444	ENSTBEG00000000586	TRUB2	100	76.444	Tupaia_belangeri
ENSCGRG00001024441	Trub2	96	82.022	ENSTTRG00000016486	TRUB2	100	77.039	Tursiops_truncatus
ENSCGRG00001024441	Trub2	96	83.708	ENSUAMG00000020276	TRUB2	96	80.000	Ursus_americanus
ENSCGRG00001024441	Trub2	96	83.708	ENSUMAG00000022051	TRUB2	96	80.000	Ursus_maritimus
ENSCGRG00001024441	Trub2	95	72.316	ENSVPAG00000005793	TRUB2	100	63.407	Vicugna_pacos
ENSCGRG00001024441	Trub2	96	83.146	ENSVVUG00000013451	TRUB2	85	83.278	Vulpes_vulpes
ENSCGRG00001024441	Trub2	91	59.172	ENSXETG00000003973	trub2	85	63.043	Xenopus_tropicalis
ENSCGRG00001024441	Trub2	91	50.000	ENSXCOG00000008759	trub2	83	52.518	Xiphophorus_couchianus
ENSCGRG00001024441	Trub2	91	49.412	ENSXMAG00000015478	trub2	83	52.518	Xiphophorus_maculatus