EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001024527 (Gene tree)
Gene ID: -
Gene Symbol: Zic3
Alias: Ka
Full Name: zinc finger protein ZIC 3
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 10118 bases
Position: chrscaffold_11:13967520-13977637
Accession: 103161887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001027552	zf-C2H2	PF00096.26	1.9e-21	1	4
ENSCGRP00001027552	zf-C2H2	PF00096.26	1.9e-21	2	4
ENSCGRP00001027552	zf-C2H2	PF00096.26	1.9e-21	3	4
ENSCGRP00001027552	zf-C2H2	PF00096.26	1.9e-21	4	4
ENSCGRP00001027548	zf-C2H2	PF00096.26	9.7e-21	1	4
ENSCGRP00001027548	zf-C2H2	PF00096.26	9.7e-21	2	4
ENSCGRP00001027548	zf-C2H2	PF00096.26	9.7e-21	3	4
ENSCGRP00001027548	zf-C2H2	PF00096.26	9.7e-21	4	4
ENSCGRP00001027548	zf-met	PF12874.7	0.00041	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001031799	-	1401	XM_007627591	ENSCGRP00001027552	466 (aa)	XP_007625781	-
ENSCGRT00001031795	-	1338	-	ENSCGRP00001027548	445 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001024527's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001024527's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001024527	Zic3	51	39.640	ENSCGRG00001024303	-	97	39.640

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001024527	Zic3	100	98.287	ENSG00000156925	ZIC3	100	98.287	Homo_sapiens
ENSCGRG00001024527	Zic3	100	98.501	ENSANAG00000019614	ZIC3	100	98.501	Aotus_nancymaae
ENSCGRG00001024527	Zic3	100	98.073	ENSCJAG00000013792	ZIC3	100	98.073	Callithrix_jacchus
ENSCGRG00001024527	Zic3	100	98.073	ENSCAFG00000018979	ZIC3	100	98.073	Canis_familiaris
ENSCGRG00001024527	Zic3	100	95.503	ENSTSYG00000003356	ZIC3	100	95.503	Carlito_syrichta
ENSCGRG00001024527	Zic3	53	98.374	ENSCPOG00000002374	ZIC3	100	98.374	Cavia_porcellus
ENSCGRG00001024527	Zic3	100	98.287	ENSCCAG00000025983	ZIC3	100	98.287	Cebus_capucinus
ENSCGRG00001024527	Zic3	100	98.287	ENSCATG00000036569	ZIC3	100	98.287	Cercocebus_atys
ENSCGRG00001024527	Zic3	100	98.927	ENSCLAG00000001934	ZIC3	100	98.927	Chinchilla_lanigera
ENSCGRG00001024527	Zic3	93	86.697	ENSCPBG00000026115	ZIC3	100	86.697	Chrysemys_picta_bellii
ENSCGRG00001024527	Zic3	100	98.073	ENSCANG00000017505	ZIC3	100	98.073	Colobus_angolensis_palliatus
ENSCGRG00001024527	Zic3	100	98.283	ENSDORG00000025481	Zic3	100	98.283	Dipodomys_ordii
ENSCGRG00001024527	Zic3	100	98.073	ENSFCAG00000025684	ZIC3	100	98.073	Felis_catus
ENSCGRG00001024527	Zic3	80	98.922	ENSFDAG00000014929	ZIC3	100	99.187	Fukomys_damarensis
ENSCGRG00001024527	Zic3	91	85.366	ENSGAGG00000004149	ZIC3	92	80.089	Gopherus_agassizii
ENSCGRG00001024527	Zic3	100	98.287	ENSGGOG00000011914	ZIC3	100	98.287	Gorilla_gorilla
ENSCGRG00001024527	Zic3	100	98.498	ENSHGLG00000006298	ZIC3	100	98.498	Heterocephalus_glaber_female
ENSCGRG00001024527	Zic3	67	68.471	ENSHGLG00100002829	ZIC3	100	77.389	Heterocephalus_glaber_male
ENSCGRG00001024527	Zic3	100	99.571	ENSJJAG00000022714	Zic3	100	99.571	Jaculus_jaculus
ENSCGRG00001024527	Zic3	100	76.231	ENSLACG00000014597	ZIC3	100	76.231	Latimeria_chalumnae
ENSCGRG00001024527	Zic3	88	93.917	ENSLAFG00000007048	ZIC3	99	93.917	Loxodonta_africana
ENSCGRG00001024527	Zic3	100	98.287	ENSMFAG00000027018	ZIC3	100	98.287	Macaca_fascicularis
ENSCGRG00001024527	Zic3	100	95.624	ENSMMUG00000002023	ZIC3	100	95.624	Macaca_mulatta
ENSCGRG00001024527	Zic3	100	98.287	ENSMNEG00000040682	ZIC3	100	98.287	Macaca_nemestrina
ENSCGRG00001024527	Zic3	100	98.287	ENSMLEG00000004378	ZIC3	100	98.287	Mandrillus_leucophaeus
ENSCGRG00001024527	Zic3	100	99.785	ENSMAUG00000009402	Zic3	100	99.785	Mesocricetus_auratus
ENSCGRG00001024527	Zic3	100	98.501	ENSMICG00000042529	ZIC3	100	98.501	Microcebus_murinus
ENSCGRG00001024527	Zic3	100	99.356	ENSMOCG00000020544	Zic3	100	99.356	Microtus_ochrogaster
ENSCGRG00001024527	Zic3	100	99.571	MGP_CAROLIEiJ_G0033101	Zic3	100	100.000	Mus_caroli
ENSCGRG00001024527	Zic3	100	99.571	ENSMUSG00000067860	Zic3	100	100.000	Mus_musculus
ENSCGRG00001024527	Zic3	100	99.571	MGP_PahariEiJ_G0031644	Zic3	100	100.000	Mus_pahari
ENSCGRG00001024527	Zic3	100	99.571	MGP_SPRETEiJ_G0034256	Zic3	100	100.000	Mus_spretus
ENSCGRG00001024527	Zic3	100	99.142	ENSNGAG00000023346	Zic3	100	99.142	Nannospalax_galili
ENSCGRG00001024527	Zic3	79	98.221	ENSNLEG00000003005	-	100	98.221	Nomascus_leucogenys
ENSCGRG00001024527	Zic3	100	98.712	ENSODEG00000005556	ZIC3	100	98.712	Octodon_degus
ENSCGRG00001024527	Zic3	100	98.287	ENSPPAG00000030013	ZIC3	100	98.287	Pan_paniscus
ENSCGRG00001024527	Zic3	100	98.073	ENSPPRG00000010839	ZIC3	100	98.073	Panthera_pardus
ENSCGRG00001024527	Zic3	100	98.287	ENSPTRG00000043849	ZIC3	100	98.287	Pan_troglodytes
ENSCGRG00001024527	Zic3	100	98.287	ENSPANG00000011357	ZIC3	100	98.287	Papio_anubis
ENSCGRG00001024527	Zic3	100	73.291	ENSPKIG00000017705	zic3	100	73.291	Paramormyrops_kingsleyae
ENSCGRG00001024527	Zic3	62	90.753	ENSPSIG00000011896	ZIC3	99	90.753	Pelodiscus_sinensis
ENSCGRG00001024527	Zic3	100	99.785	ENSPEMG00000022168	Zic3	100	99.785	Peromyscus_maniculatus_bairdii
ENSCGRG00001024527	Zic3	100	98.073	ENSPCOG00000021557	ZIC3	100	98.073	Propithecus_coquereli
ENSCGRG00001024527	Zic3	100	99.142	ENSRNOG00000000861	Zic3	100	99.142	Rattus_norvegicus
ENSCGRG00001024527	Zic3	100	98.073	ENSRBIG00000030660	ZIC3	100	98.073	Rhinopithecus_bieti
ENSCGRG00001024527	Zic3	100	98.073	ENSRROG00000028410	ZIC3	100	98.073	Rhinopithecus_roxellana
ENSCGRG00001024527	Zic3	100	98.715	ENSSBOG00000024684	ZIC3	100	98.715	Saimiri_boliviensis_boliviensis
ENSCGRG00001024527	Zic3	99	74.678	ENSSFOG00015011731	zic3	100	74.678	Scleropages_formosus
ENSCGRG00001024527	Zic3	99	68.670	ENSSFOG00015008079	zic3	100	68.670	Scleropages_formosus
ENSCGRG00001024527	Zic3	83	82.995	ENSTGUG00000002155	ZIC3	100	82.995	Taeniopygia_guttata
ENSCGRG00001024527	Zic3	100	98.073	ENSVVUG00000021378	ZIC3	100	98.073	Vulpes_vulpes
ENSCGRG00001024527	Zic3	100	77.186	ENSXETG00000024458	zic3	100	77.186	Xenopus_tropicalis