EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001024589 (Gene tree)
Gene ID: -
Gene Symbol: Rif1
Alias: 5730435J01Rik|6530403D07Rik|D2Ertd145e
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 63157 bases
Position: chrscaffold_3:98412372-98475528
Accession: 1098622
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001027653	Rif1_N	PF12231.8	1e-71	1	1
ENSCGRP00001027649	Rif1_N	PF12231.8	1e-71	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001031901	-	7200	-	ENSCGRP00001027653	2399 (aa)	-	-
ENSCGRT00001031897	-	7203	-	ENSCGRP00001027649	2400 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001024589's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001024589's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001024589	Rif1	100	70.269	ENSG00000080345	RIF1	99	81.390	Homo_sapiens
ENSCGRG00001024589	Rif1	68	46.256	ENSAPOG00000011073	rif1	68	45.562	Acanthochromis_polyacanthus
ENSCGRG00001024589	Rif1	100	70.319	ENSAMEG00000008461	RIF1	100	70.198	Ailuropoda_melanoleuca
ENSCGRG00001024589	Rif1	66	48.217	ENSACIG00000017765	rif1	65	51.148	Amphilophus_citrinellus
ENSCGRG00001024589	Rif1	55	46.439	ENSAOCG00000017231	rif1	55	45.514	Amphiprion_ocellaris
ENSCGRG00001024589	Rif1	69	51.435	ENSAPEG00000013228	rif1	51	50.469	Amphiprion_percula
ENSCGRG00001024589	Rif1	67	46.702	ENSATEG00000022887	rif1	69	45.641	Anabas_testudineus
ENSCGRG00001024589	Rif1	84	65.588	ENSAPLG00000007092	RIF1	92	65.680	Anas_platyrhynchos
ENSCGRG00001024589	Rif1	85	57.864	ENSACAG00000003714	RIF1	89	58.036	Anolis_carolinensis
ENSCGRG00001024589	Rif1	100	69.815	ENSANAG00000024840	RIF1	99	69.815	Aotus_nancymaae
ENSCGRG00001024589	Rif1	65	49.094	ENSAMXG00000010910	rif1	65	48.569	Astyanax_mexicanus
ENSCGRG00001024589	Rif1	94	68.414	ENSBTAG00000021020	RIF1	99	68.100	Bos_taurus
ENSCGRG00001024589	Rif1	100	69.497	ENSCJAG00000003138	RIF1	99	69.416	Callithrix_jacchus
ENSCGRG00001024589	Rif1	100	68.554	ENSCAFG00000005670	RIF1	97	68.112	Canis_familiaris
ENSCGRG00001024589	Rif1	100	68.959	ENSCAFG00020016401	RIF1	99	68.511	Canis_lupus_dingo
ENSCGRG00001024589	Rif1	100	69.253	ENSCHIG00000020327	RIF1	99	68.901	Capra_hircus
ENSCGRG00001024589	Rif1	99	81.720	ENSTSYG00000008861	RIF1	100	81.720	Carlito_syrichta
ENSCGRG00001024589	Rif1	86	76.744	ENSCAPG00000008957	RIF1	99	76.744	Cavia_aperea
ENSCGRG00001024589	Rif1	100	66.857	ENSCPOG00000037898	RIF1	99	67.171	Cavia_porcellus
ENSCGRG00001024589	Rif1	100	69.011	ENSCCAG00000024760	RIF1	99	69.011	Cebus_capucinus
ENSCGRG00001024589	Rif1	100	70.330	ENSCATG00000033353	RIF1	99	70.330	Cercocebus_atys
ENSCGRG00001024589	Rif1	96	67.781	ENSCLAG00000001517	RIF1	99	67.865	Chinchilla_lanigera
ENSCGRG00001024589	Rif1	100	70.543	ENSCSAG00000016089	RIF1	99	70.543	Chlorocebus_sabaeus
ENSCGRG00001024589	Rif1	97	69.620	ENSCHOG00000007187	RIF1	97	69.620	Choloepus_hoffmanni
ENSCGRG00001024589	Rif1	90	66.384	ENSCPBG00000025885	RIF1	96	66.667	Chrysemys_picta_bellii
ENSCGRG00001024589	Rif1	100	69.024	ENSCANG00000028962	RIF1	100	69.660	Colobus_angolensis_palliatus
ENSCGRG00001024589	Rif1	99	98.205	ENSCGRG00000010713	Rif1	100	98.205	Cricetulus_griseus_crigri
ENSCGRG00001024589	Rif1	63	52.308	ENSCSEG00000003945	rif1	66	52.308	Cynoglossus_semilaevis
ENSCGRG00001024589	Rif1	67	45.245	ENSCVAG00000022479	rif1	69	45.360	Cyprinodon_variegatus
ENSCGRG00001024589	Rif1	51	49.126	ENSDARG00000062650	rif1	52	48.634	Danio_rerio
ENSCGRG00001024589	Rif1	99	67.312	ENSDNOG00000011194	RIF1	97	67.393	Dasypus_novemcinctus
ENSCGRG00001024589	Rif1	91	69.660	ENSETEG00000012421	RIF1	91	69.335	Echinops_telfairi
ENSCGRG00001024589	Rif1	91	87.622	ENSEASG00005023434	RIF1	98	87.622	Equus_asinus_asinus
ENSCGRG00001024589	Rif1	97	82.362	ENSECAG00000012679	RIF1	99	82.362	Equus_caballus
ENSCGRG00001024589	Rif1	68	47.126	ENSELUG00000006826	rif1	59	46.429	Esox_lucius
ENSCGRG00001024589	Rif1	100	69.154	ENSFCAG00000029742	RIF1	99	69.262	Felis_catus
ENSCGRG00001024589	Rif1	76	65.064	ENSFALG00000013874	RIF1	89	62.696	Ficedula_albicollis
ENSCGRG00001024589	Rif1	100	69.563	ENSFDAG00000006538	RIF1	99	69.228	Fukomys_damarensis
ENSCGRG00001024589	Rif1	64	48.169	ENSFHEG00000013721	rif1	65	47.494	Fundulus_heteroclitus
ENSCGRG00001024589	Rif1	55	50.833	ENSGMOG00000003517	rif1	92	48.019	Gadus_morhua
ENSCGRG00001024589	Rif1	81	57.360	ENSGALG00000012484	RIF1	96	52.739	Gallus_gallus
ENSCGRG00001024589	Rif1	66	48.369	ENSGAFG00000017196	rif1	68	51.537	Gambusia_affinis
ENSCGRG00001024589	Rif1	60	52.479	ENSGACG00000008579	rif1	70	50.988	Gasterosteus_aculeatus
ENSCGRG00001024589	Rif1	90	65.722	ENSGAGG00000012595	RIF1	95	66.006	Gopherus_agassizii
ENSCGRG00001024589	Rif1	89	82.885	ENSGGOG00000040178	RIF1	96	82.885	Gorilla_gorilla
ENSCGRG00001024589	Rif1	65	53.785	ENSHBUG00000007125	rif1	70	50.391	Haplochromis_burtoni
ENSCGRG00001024589	Rif1	94	68.273	ENSHGLG00100009807	RIF1	99	68.259	Heterocephalus_glaber_male
ENSCGRG00001024589	Rif1	64	47.649	ENSHCOG00000015943	rif1	59	46.803	Hippocampus_comes
ENSCGRG00001024589	Rif1	64	49.879	ENSIPUG00000021703	rif1	64	49.601	Ictalurus_punctatus
ENSCGRG00001024589	Rif1	100	71.572	ENSSTOG00000020712	RIF1	99	71.572	Ictidomys_tridecemlineatus
ENSCGRG00001024589	Rif1	99	69.701	ENSJJAG00000023000	Rif1	100	69.526	Jaculus_jaculus
ENSCGRG00001024589	Rif1	64	51.020	ENSLBEG00000023196	rif1	61	48.161	Labrus_bergylta
ENSCGRG00001024589	Rif1	66	62.908	ENSLACG00000005425	RIF1	68	62.908	Latimeria_chalumnae
ENSCGRG00001024589	Rif1	65	51.246	ENSLOCG00000002657	rif1	83	47.748	Lepisosteus_oculatus
ENSCGRG00001024589	Rif1	100	68.682	ENSLAFG00000009796	RIF1	100	68.600	Loxodonta_africana
ENSCGRG00001024589	Rif1	100	70.543	ENSMFAG00000032233	RIF1	99	70.543	Macaca_fascicularis
ENSCGRG00001024589	Rif1	100	70.543	ENSMMUG00000008611	RIF1	99	70.543	Macaca_mulatta
ENSCGRG00001024589	Rif1	100	70.382	ENSMNEG00000031616	RIF1	99	70.463	Macaca_nemestrina
ENSCGRG00001024589	Rif1	100	70.584	ENSMLEG00000042945	RIF1	99	70.584	Mandrillus_leucophaeus
ENSCGRG00001024589	Rif1	60	48.135	ENSMAMG00000001745	rif1	60	48.039	Mastacembelus_armatus
ENSCGRG00001024589	Rif1	69	48.611	ENSMZEG00005020920	rif1	74	48.137	Maylandia_zebra
ENSCGRG00001024589	Rif1	87	54.177	ENSMGAG00000012732	RIF1	96	52.629	Meleagris_gallopavo
ENSCGRG00001024589	Rif1	94	96.448	ENSMAUG00000013158	Rif1	99	96.448	Mesocricetus_auratus
ENSCGRG00001024589	Rif1	100	71.216	ENSMICG00000046127	RIF1	99	71.176	Microcebus_murinus
ENSCGRG00001024589	Rif1	100	81.189	ENSMOCG00000009381	Rif1	100	81.148	Microtus_ochrogaster
ENSCGRG00001024589	Rif1	65	47.768	ENSMMOG00000006519	rif1	51	47.612	Mola_mola
ENSCGRG00001024589	Rif1	100	57.120	ENSMODG00000003703	RIF1	99	56.924	Monodelphis_domestica
ENSCGRG00001024589	Rif1	66	45.913	ENSMALG00000016759	rif1	66	50.225	Monopterus_albus
ENSCGRG00001024589	Rif1	100	80.090	MGP_CAROLIEiJ_G0023555	Rif1	100	79.754	Mus_caroli
ENSCGRG00001024589	Rif1	100	80.908	ENSMUSG00000036202	Rif1	100	80.573	Mus_musculus
ENSCGRG00001024589	Rif1	100	78.551	MGP_PahariEiJ_G0025006	Rif1	100	78.256	Mus_pahari
ENSCGRG00001024589	Rif1	100	80.654	MGP_SPRETEiJ_G0024476	Rif1	100	80.654	Mus_spretus
ENSCGRG00001024589	Rif1	100	68.768	ENSMPUG00000000371	RIF1	99	68.474	Mustela_putorius_furo
ENSCGRG00001024589	Rif1	89	67.121	ENSMLUG00000003376	RIF1	100	67.121	Myotis_lucifugus
ENSCGRG00001024589	Rif1	100	74.509	ENSNGAG00000009268	Rif1	99	74.550	Nannospalax_galili
ENSCGRG00001024589	Rif1	70	47.696	ENSNBRG00000014257	rif1	73	47.683	Neolamprologus_brichardi
ENSCGRG00001024589	Rif1	100	68.655	ENSNLEG00000010955	RIF1	99	68.788	Nomascus_leucogenys
ENSCGRG00001024589	Rif1	75	76.786	ENSMEUG00000007601	-	80	76.786	Notamacropus_eugenii
ENSCGRG00001024589	Rif1	100	67.657	ENSODEG00000003950	RIF1	99	68.267	Octodon_degus
ENSCGRG00001024589	Rif1	69	48.705	ENSONIG00000013657	rif1	63	47.585	Oreochromis_niloticus
ENSCGRG00001024589	Rif1	71	71.562	ENSOANG00000006078	-	73	71.562	Ornithorhynchus_anatinus
ENSCGRG00001024589	Rif1	100	68.200	ENSOCUG00000017435	RIF1	99	68.119	Oryctolagus_cuniculus
ENSCGRG00001024589	Rif1	64	47.026	ENSORLG00020001302	rif1	68	46.454	Oryzias_latipes_hni
ENSCGRG00001024589	Rif1	64	47.026	ENSORLG00015000009	rif1	67	45.725	Oryzias_latipes_hsok
ENSCGRG00001024589	Rif1	63	47.180	ENSOMEG00000021513	rif1	67	46.468	Oryzias_melastigma
ENSCGRG00001024589	Rif1	100	68.838	ENSOGAG00000006141	RIF1	99	68.597	Otolemur_garnettii
ENSCGRG00001024589	Rif1	100	69.082	ENSOARG00000008930	RIF1	99	68.732	Ovis_aries
ENSCGRG00001024589	Rif1	100	70.333	ENSPPAG00000023754	RIF1	99	70.333	Pan_paniscus
ENSCGRG00001024589	Rif1	100	69.073	ENSPPRG00000003618	RIF1	99	69.194	Panthera_pardus
ENSCGRG00001024589	Rif1	100	69.154	ENSPTIG00000020652	RIF1	99	69.274	Panthera_tigris_altaica
ENSCGRG00001024589	Rif1	100	70.494	ENSPTRG00000012534	RIF1	99	70.494	Pan_troglodytes
ENSCGRG00001024589	Rif1	100	70.503	ENSPANG00000008525	RIF1	99	70.503	Papio_anubis
ENSCGRG00001024589	Rif1	64	50.282	ENSPKIG00000004267	rif1	67	50.200	Paramormyrops_kingsleyae
ENSCGRG00001024589	Rif1	79	41.304	ENSPMGG00000016141	rif1	77	44.391	Periophthalmus_magnuspinnatus
ENSCGRG00001024589	Rif1	99	84.663	ENSPEMG00000000446	Rif1	99	84.414	Peromyscus_maniculatus_bairdii
ENSCGRG00001024589	Rif1	100	56.361	ENSPCIG00000009185	RIF1	99	56.348	Phascolarctos_cinereus
ENSCGRG00001024589	Rif1	60	50.370	ENSPFOG00000000554	-	67	50.185	Poecilia_formosa
ENSCGRG00001024589	Rif1	67	49.599	ENSPFOG00000017804	rif1	69	49.518	Poecilia_formosa
ENSCGRG00001024589	Rif1	65	49.799	ENSPLAG00000017945	rif1	74	49.278	Poecilia_latipinna
ENSCGRG00001024589	Rif1	68	48.653	ENSPREG00000018052	rif1	71	51.859	Poecilia_reticulata
ENSCGRG00001024589	Rif1	100	70.470	ENSPPYG00000012846	RIF1	99	70.602	Pongo_abelii
ENSCGRG00001024589	Rif1	82	72.727	ENSPCAG00000009032	RIF1	83	72.727	Procavia_capensis
ENSCGRG00001024589	Rif1	100	71.520	ENSPCOG00000027888	RIF1	99	71.520	Propithecus_coquereli
ENSCGRG00001024589	Rif1	93	83.000	ENSPVAG00000014276	RIF1	95	83.000	Pteropus_vampyrus
ENSCGRG00001024589	Rif1	69	47.141	ENSPNYG00000012940	rif1	73	46.852	Pundamilia_nyererei
ENSCGRG00001024589	Rif1	51	50.161	ENSPNAG00000016685	rif1	52	49.574	Pygocentrus_nattereri
ENSCGRG00001024589	Rif1	100	79.738	ENSRNOG00000054901	Rif1	100	79.492	Rattus_norvegicus
ENSCGRG00001024589	Rif1	100	69.293	ENSRBIG00000003704	RIF1	99	69.425	Rhinopithecus_bieti
ENSCGRG00001024589	Rif1	100	70.217	ENSRROG00000028206	RIF1	99	70.350	Rhinopithecus_roxellana
ENSCGRG00001024589	Rif1	97	84.946	ENSSBOG00000029530	RIF1	99	84.946	Saimiri_boliviensis_boliviensis
ENSCGRG00001024589	Rif1	100	56.396	ENSSHAG00000018552	RIF1	99	56.195	Sarcophilus_harrisii
ENSCGRG00001024589	Rif1	66	49.885	ENSSFOG00015021539	rif1	75	48.487	Scleropages_formosus
ENSCGRG00001024589	Rif1	66	46.913	ENSSMAG00000011704	rif1	64	45.710	Scophthalmus_maximus
ENSCGRG00001024589	Rif1	64	48.950	ENSSDUG00000015632	rif1	56	46.309	Seriola_dumerili
ENSCGRG00001024589	Rif1	50	48.965	ENSSLDG00000019531	rif1	53	46.439	Seriola_lalandi_dorsalis
ENSCGRG00001024589	Rif1	60	82.500	ENSSARG00000007161	-	61	82.500	Sorex_araneus
ENSCGRG00001024589	Rif1	88	67.045	ENSSPUG00000003062	RIF1	95	67.045	Sphenodon_punctatus
ENSCGRG00001024589	Rif1	55	56.262	ENSSPAG00000018359	rif1	81	55.467	Stegastes_partitus
ENSCGRG00001024589	Rif1	100	70.068	ENSSSCG00000016395	RIF1	99	70.068	Sus_scrofa
ENSCGRG00001024589	Rif1	67	47.917	ENSTRUG00000015808	rif1	71	46.642	Takifugu_rubripes
ENSCGRG00001024589	Rif1	68	49.568	ENSTNIG00000011538	rif1	71	47.929	Tetraodon_nigroviridis
ENSCGRG00001024589	Rif1	79	85.987	ENSTBEG00000016082	RIF1	78	85.987	Tupaia_belangeri
ENSCGRG00001024589	Rif1	100	69.899	ENSTTRG00000011190	RIF1	99	69.940	Tursiops_truncatus
ENSCGRG00001024589	Rif1	90	68.452	ENSUAMG00000026385	RIF1	99	68.273	Ursus_americanus
ENSCGRG00001024589	Rif1	100	69.936	ENSUMAG00000000337	RIF1	99	69.775	Ursus_maritimus
ENSCGRG00001024589	Rif1	100	67.659	ENSVPAG00000002162	RIF1	99	67.418	Vicugna_pacos
ENSCGRG00001024589	Rif1	100	68.821	ENSVVUG00000011293	RIF1	99	68.283	Vulpes_vulpes
ENSCGRG00001024589	Rif1	85	62.236	ENSXETG00000004530	rif1	73	62.236	Xenopus_tropicalis
ENSCGRG00001024589	Rif1	67	46.907	ENSXMAG00000000506	rif1	66	47.310	Xiphophorus_maculatus