EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001024630 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 4356 bases
Position: chrscaffold_0:126761728-126766083
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001027698	zf-C2H2	PF00096.26	6.3e-50	1	9
ENSCGRP00001027698	zf-C2H2	PF00096.26	6.3e-50	2	9
ENSCGRP00001027698	zf-C2H2	PF00096.26	6.3e-50	3	9
ENSCGRP00001027698	zf-C2H2	PF00096.26	6.3e-50	4	9
ENSCGRP00001027698	zf-C2H2	PF00096.26	6.3e-50	5	9
ENSCGRP00001027698	zf-C2H2	PF00096.26	6.3e-50	6	9
ENSCGRP00001027698	zf-C2H2	PF00096.26	6.3e-50	7	9
ENSCGRP00001027698	zf-C2H2	PF00096.26	6.3e-50	8	9
ENSCGRP00001027698	zf-C2H2	PF00096.26	6.3e-50	9	9
ENSCGRP00001027698	zf-met	PF12874.7	0.00037	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001031946	-	1401	-	ENSCGRP00001027698	466 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001024630's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001024630's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001024630	-	86	43.478	ENSCGRG00001019408	Zbtb17	55	41.908
ENSCGRG00001024630	-	97	47.826	ENSCGRG00001010752	2610008E11Rik	96	48.966
ENSCGRG00001024630	-	97	50.000	ENSCGRG00001013939	Zfp454	98	50.000
ENSCGRG00001024630	-	83	48.120	ENSCGRG00001013367	Zfp61	67	48.120
ENSCGRG00001024630	-	81	48.018	ENSCGRG00001013561	Zfp768	52	46.570
ENSCGRG00001024630	-	96	54.000	ENSCGRG00001021088	Zfp354a	98	50.137
ENSCGRG00001024630	-	96	42.678	ENSCGRG00001006591	Zkscan3	61	42.678
ENSCGRG00001024630	-	85	40.000	ENSCGRG00001010581	Prdm5	75	40.000
ENSCGRG00001024630	-	83	38.372	ENSCGRG00001015432	Gfi1	52	40.268
ENSCGRG00001024630	-	96	47.324	ENSCGRG00001000576	Zfp26	88	47.324
ENSCGRG00001024630	-	90	46.023	ENSCGRG00001002297	-	100	46.023
ENSCGRG00001024630	-	96	50.452	ENSCGRG00001007115	-	100	50.452
ENSCGRG00001024630	-	97	48.396	ENSCGRG00001011966	Zfp715	88	48.396
ENSCGRG00001024630	-	90	47.445	ENSCGRG00001012523	-	96	49.716
ENSCGRG00001024630	-	83	37.755	ENSCGRG00001001429	Zfp574	93	37.755
ENSCGRG00001024630	-	96	47.902	ENSCGRG00001002406	Zfp39	91	47.902
ENSCGRG00001024630	-	83	46.809	ENSCGRG00001015424	-	78	46.809
ENSCGRG00001024630	-	76	45.312	ENSCGRG00001013279	Zfp784	73	45.312
ENSCGRG00001024630	-	88	43.373	ENSCGRG00001012398	Zfp236	60	43.373
ENSCGRG00001024630	-	80	46.067	ENSCGRG00001013674	Snai2	51	46.067
ENSCGRG00001024630	-	74	37.000	ENSCGRG00001004071	Patz1	59	31.128
ENSCGRG00001024630	-	96	47.826	ENSCGRG00001020646	Gm3854	96	47.826
ENSCGRG00001024630	-	84	45.223	ENSCGRG00001004047	-	66	45.223
ENSCGRG00001024630	-	85	48.387	ENSCGRG00001013602	-	99	48.387
ENSCGRG00001024630	-	96	49.157	ENSCGRG00001023858	Zfp560	90	49.157
ENSCGRG00001024630	-	88	75.000	ENSCGRG00001019143	-	98	75.000
ENSCGRG00001024630	-	82	39.610	ENSCGRG00001017330	Repin1	82	36.913
ENSCGRG00001024630	-	79	36.538	ENSCGRG00001005125	Wt1	53	42.254
ENSCGRG00001024630	-	97	48.276	ENSCGRG00001007163	-	99	48.276
ENSCGRG00001024630	-	85	39.205	ENSCGRG00001009557	Zfp319	92	37.632
ENSCGRG00001024630	-	77	35.882	ENSCGRG00001008879	Maz	61	35.928
ENSCGRG00001024630	-	96	52.000	ENSCGRG00001017579	Zfp112	69	52.000
ENSCGRG00001024630	-	97	46.853	ENSCGRG00001001639	Zfp882	99	46.853
ENSCGRG00001024630	-	96	61.024	ENSCGRG00001024303	-	98	61.024
ENSCGRG00001024630	-	96	38.222	ENSCGRG00001018100	Zfp202	63	32.326
ENSCGRG00001024630	-	96	38.365	ENSCGRG00001010967	Zfp1	98	38.365
ENSCGRG00001024630	-	96	51.527	ENSCGRG00001012803	-	94	50.404
ENSCGRG00001024630	-	80	42.500	ENSCGRG00001011389	Snai3	76	42.500
ENSCGRG00001024630	-	80	44.944	ENSCGRG00001007749	Snai1	52	44.944
ENSCGRG00001024630	-	83	52.344	ENSCGRG00001012640	Zfp94	79	52.344
ENSCGRG00001024630	-	91	40.000	ENSCGRG00001013598	Zfp865	78	31.667
ENSCGRG00001024630	-	76	32.804	ENSCGRG00001023063	Zfp423	79	32.804
ENSCGRG00001024630	-	83	45.500	ENSCGRG00001019468	Zfp628	63	41.885

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001024630	-	78	32.209	ENSAPOG00000001097	-	60	33.871	Acanthochromis_polyacanthus
ENSCGRG00001024630	-	80	31.298	ENSATEG00000014755	-	58	36.029	Anabas_testudineus
ENSCGRG00001024630	-	88	52.339	ENSCSAG00000001938	ZNF845	89	52.198	Chlorocebus_sabaeus
ENSCGRG00001024630	-	87	42.458	ENSCSAVG00000007589	-	100	42.458	Ciona_savignyi
ENSCGRG00001024630	-	92	47.042	ENSCSAVG00000001989	-	99	47.863	Ciona_savignyi
ENSCGRG00001024630	-	83	51.923	ENSCANG00000038794	ZNF845	87	51.923	Colobus_angolensis_palliatus
ENSCGRG00001024630	-	85	47.480	ENSEBUG00000012628	ZNF845	83	50.000	Eptatretus_burgeri
ENSCGRG00001024630	-	93	50.000	ENSEBUG00000008988	ZNF845	95	50.000	Eptatretus_burgeri
ENSCGRG00001024630	-	86	46.281	ENSEBUG00000007308	ZNF845	96	46.281	Eptatretus_burgeri
ENSCGRG00001024630	-	84	51.538	ENSEBUG00000008852	ZNF845	71	51.538	Eptatretus_burgeri
ENSCGRG00001024630	-	81	30.959	ENSHBUG00000009720	-	64	30.531	Haplochromis_burtoni
ENSCGRG00001024630	-	96	51.923	ENSMLEG00000044333	ZNF845	99	51.923	Mandrillus_leucophaeus
ENSCGRG00001024630	-	76	32.075	ENSMAMG00000018536	-	61	32.258	Mastacembelus_armatus
ENSCGRG00001024630	-	81	33.846	ENSMZEG00005020085	-	91	33.846	Maylandia_zebra
ENSCGRG00001024630	-	96	52.742	ENSMAUG00000014247	-	100	50.852	Mesocricetus_auratus
ENSCGRG00001024630	-	99	56.823	ENSMOCG00000002167	Zfp712	98	56.823	Microtus_ochrogaster
ENSCGRG00001024630	-	76	32.961	ENSMALG00000013321	-	75	37.963	Monopterus_albus
ENSCGRG00001024630	-	96	49.894	MGP_CAROLIEiJ_G0018661	Zfp759	99	49.894	Mus_caroli
ENSCGRG00001024630	-	96	50.317	ENSMUSG00000057396	Zfp759	99	50.317	Mus_musculus
ENSCGRG00001024630	-	96	53.521	ENSMUSG00000095432	Zfp748	99	54.085	Mus_musculus
ENSCGRG00001024630	-	96	55.319	MGP_PahariEiJ_G0015756	Zfp748	99	55.319	Mus_pahari
ENSCGRG00001024630	-	97	49.580	MGP_PahariEiJ_G0015741	Zfp759	99	49.580	Mus_pahari
ENSCGRG00001024630	-	96	53.521	MGP_SPRETEiJ_G0019560	Zfp748	99	54.085	Mus_spretus
ENSCGRG00001024630	-	96	50.424	MGP_SPRETEiJ_G0019544	Zfp759	100	50.529	Mus_spretus
ENSCGRG00001024630	-	96	52.339	ENSNLEG00000006172	ZNF845	99	52.198	Nomascus_leucogenys
ENSCGRG00001024630	-	80	30.606	ENSORLG00000028851	-	64	34.066	Oryzias_latipes
ENSCGRG00001024630	-	82	33.333	ENSOMEG00000010300	-	90	33.333	Oryzias_melastigma
ENSCGRG00001024630	-	96	54.930	ENSOGAG00000029343	-	99	54.930	Otolemur_garnettii
ENSCGRG00001024630	-	96	52.198	ENSPTRG00000050668	ZNF845	99	52.198	Pan_troglodytes
ENSCGRG00001024630	-	96	69.731	ENSPEMG00000020934	-	100	69.731	Peromyscus_maniculatus_bairdii
ENSCGRG00001024630	-	99	57.143	ENSPEMG00000021548	Zfp712	98	57.143	Peromyscus_maniculatus_bairdii
ENSCGRG00001024630	-	82	32.593	ENSPFOG00000010474	-	98	35.000	Poecilia_formosa
ENSCGRG00001024630	-	83	34.959	ENSPLAG00000017843	-	89	34.959	Poecilia_latipinna
ENSCGRG00001024630	-	77	32.593	ENSPMEG00000017809	-	65	32.593	Poecilia_mexicana
ENSCGRG00001024630	-	96	57.589	ENSRNOG00000049259	LOC102549842	99	53.239	Rattus_norvegicus
ENSCGRG00001024630	-	96	49.296	ENSRBIG00000035402	-	97	49.296	Rhinopithecus_bieti
ENSCGRG00001024630	-	82	51.206	ENSSBOG00000028573	-	81	51.206	Saimiri_boliviensis_boliviensis
ENSCGRG00001024630	-	83	30.809	ENSSDUG00000010305	-	61	30.809	Seriola_dumerili
ENSCGRG00001024630	-	77	31.481	ENSSPAG00000010470	-	62	31.481	Stegastes_partitus