EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCGRG00001024927 (Gene tree)
Gene ID
-
Gene Symbol
Patl1
Alias
Pat1b
Full Name
PAT1 homolog 1%2C processing body mRNA decay factor
Gene Type
protein_coding
Species
Cricetulus_griseus_chok1gshd
Status
putative
Strand
Plus strand
Length
32098 bases
Position
chrscaffold_9:46465916-46498013
Accession
100752804
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCGRP00001028111PAT1PF09770.96.7e-1911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCGRT00001032359-4337XM_007607573ENSCGRP00001028111770 (aa)XP_007605763-
Gene Model
Click here to download ENSCGRG00001024927's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001024927's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCGRG00001024927Patl110096.494ENSG00000166889PATL110096.494Homo_sapiens
ENSCGRG00001024927Patl16335.510ENSG00000229474PATL29937.637Homo_sapiens
ENSCGRG00001024927Patl18553.477ENSAPOG00000021290patl19848.765Acanthochromis_polyacanthus
ENSCGRG00001024927Patl16834.133ENSAPOG00000022988patl27333.641Acanthochromis_polyacanthus
ENSCGRG00001024927Patl16234.908ENSAMEG00000014997PATL27536.408Ailuropoda_melanoleuca
ENSCGRG00001024927Patl110095.071ENSAMEG00000014215PATL110094.163Ailuropoda_melanoleuca
ENSCGRG00001024927Patl19645.747ENSACIG00000005182patl19946.087Amphilophus_citrinellus
ENSCGRG00001024927Patl18731.025ENSAOCG00000023738patl25634.029Amphiprion_ocellaris
ENSCGRG00001024927Patl15453.606ENSAOCG00000021993patl19547.187Amphiprion_ocellaris
ENSCGRG00001024927Patl16263.077ENSAPEG00000021391patl17964.615Amphiprion_percula
ENSCGRG00001024927Patl16633.915ENSAPEG00000011299patl26834.100Amphiprion_percula
ENSCGRG00001024927Patl16434.517ENSATEG00000019567patl27034.122Anabas_testudineus
ENSCGRG00001024927Patl19163.333ENSATEG00000002230patl18066.667Anabas_testudineus
ENSCGRG00001024927Patl15339.225ENSAPLG00000003980PATL26439.225Anas_platyrhynchos
ENSCGRG00001024927Patl17170.471ENSAPLG00000013394PATL19970.492Anas_platyrhynchos
ENSCGRG00001024927Patl19980.415ENSACAG00000006607PATL19979.637Anolis_carolinensis
ENSCGRG00001024927Patl110096.623ENSANAG00000023078PATL110096.623Aotus_nancymaae
ENSCGRG00001024927Patl16266.667ENSACLG00000005144patl18350.617Astatotilapia_calliptera
ENSCGRG00001024927Patl18731.905ENSACLG00000010326patl25437.470Astatotilapia_calliptera
ENSCGRG00001024927Patl16435.039ENSAMXG00000020293patl26334.591Astyanax_mexicanus
ENSCGRG00001024927Patl18952.871ENSAMXG00000010731patl19946.125Astyanax_mexicanus
ENSCGRG00001024927Patl110094.812ENSBTAG00000005913PATL110094.812Bos_taurus
ENSCGRG00001024927Patl16335.597ENSCJAG00000002379PATL27237.440Callithrix_jacchus
ENSCGRG00001024927Patl110096.364ENSCJAG00000016192PATL110096.364Callithrix_jacchus
ENSCGRG00001024927Patl110095.850ENSCAFG00000007581PATL110094.942Canis_familiaris
ENSCGRG00001024927Patl16435.644ENSCAFG00000013629PATL27237.923Canis_familiaris
ENSCGRG00001024927Patl19995.817ENSCAFG00020001648PATL110094.902Canis_lupus_dingo
ENSCGRG00001024927Patl16435.644ENSCAFG00020022169PATL27237.923Canis_lupus_dingo
ENSCGRG00001024927Patl16237.603ENSCHIG00000026665PATL27439.192Capra_hircus
ENSCGRG00001024927Patl110093.645ENSCHIG00000025913PATL110093.645Capra_hircus
ENSCGRG00001024927Patl19995.828ENSTSYG00000012748PATL19695.828Carlito_syrichta
ENSCGRG00001024927Patl110090.544ENSCAPG00000013668PATL19990.544Cavia_aperea
ENSCGRG00001024927Patl110088.861ENSCPOG00000006827PATL110088.987Cavia_porcellus
ENSCGRG00001024927Patl110096.623ENSCCAG00000023759PATL110096.623Cebus_capucinus
ENSCGRG00001024927Patl110096.623ENSCATG00000009629PATL110096.623Cercocebus_atys
ENSCGRG00001024927Patl19992.026ENSCLAG00000003427PATL110092.026Chinchilla_lanigera
ENSCGRG00001024927Patl15135.459ENSCLAG00000014407PATL27335.459Chinchilla_lanigera
ENSCGRG00001024927Patl19096.835ENSCSAG00000006095PATL110096.835Chlorocebus_sabaeus
ENSCGRG00001024927Patl16896.970ENSCHOG00000001611PATL18396.970Choloepus_hoffmanni
ENSCGRG00001024927Patl15339.806ENSCPBG00000006150PATL25939.806Chrysemys_picta_bellii
ENSCGRG00001024927Patl19996.749ENSCANG00000039197PATL19996.749Colobus_angolensis_palliatus
ENSCGRG00001024927Patl16334.827ENSCANG00000013856PATL27237.590Colobus_angolensis_palliatus
ENSCGRG00001024927Patl110099.481ENSCGRG00000000461Patl1100100.000Cricetulus_griseus_crigri
ENSCGRG00001024927Patl16234.504ENSCSEG00000009438patl25735.613Cynoglossus_semilaevis
ENSCGRG00001024927Patl19265.000ENSCSEG00000008261patl18256.977Cynoglossus_semilaevis
ENSCGRG00001024927Patl15830.000ENSCVAG00000016203patl26330.303Cyprinodon_variegatus
ENSCGRG00001024927Patl18951.675ENSCVAG00000006664patl110046.835Cyprinodon_variegatus
ENSCGRG00001024927Patl19946.845ENSDARG00000017423patl110046.321Danio_rerio
ENSCGRG00001024927Patl16734.906ENSDARG00000089567patl26435.516Danio_rerio
ENSCGRG00001024927Patl19988.773ENSDNOG00000038865PATL19893.738Dasypus_novemcinctus
ENSCGRG00001024927Patl110095.714ENSDORG00000000237Patl110095.714Dipodomys_ordii
ENSCGRG00001024927Patl15137.084ENSDORG00000026649Patl27237.084Dipodomys_ordii
ENSCGRG00001024927Patl110095.466ENSEASG00005007963PATL110095.466Equus_asinus_asinus
ENSCGRG00001024927Patl110095.337ENSECAG00000011411PATL110095.337Equus_caballus
ENSCGRG00001024927Patl16934.328ENSELUG00000023244patl25436.842Esox_lucius
ENSCGRG00001024927Patl18958.730ENSELUG00000024249patl18068.333Esox_lucius
ENSCGRG00001024927Patl110095.844ENSFCAG00000015573PATL110095.844Felis_catus
ENSCGRG00001024927Patl16235.510ENSFCAG00000027170PATL27336.715Felis_catus
ENSCGRG00001024927Patl19980.364ENSFALG00000012150PATL19980.364Ficedula_albicollis
ENSCGRG00001024927Patl19991.503ENSFDAG00000016128PATL110091.242Fukomys_damarensis
ENSCGRG00001024927Patl15134.673ENSFDAG00000012242PATL27336.432Fukomys_damarensis
ENSCGRG00001024927Patl16266.667ENSFHEG00000017790patl18359.155Fundulus_heteroclitus
ENSCGRG00001024927Patl15733.632ENSGMOG00000005666patl29934.762Gadus_morhua
ENSCGRG00001024927Patl19977.516ENSGALG00000042641PATL110077.386Gallus_gallus
ENSCGRG00001024927Patl19730.628ENSGAFG00000019344patl25537.831Gambusia_affinis
ENSCGRG00001024927Patl16460.563ENSGAFG00000006508patl18460.563Gambusia_affinis
ENSCGRG00001024927Patl19948.201ENSGACG00000016448patl19949.936Gasterosteus_aculeatus
ENSCGRG00001024927Patl110083.829ENSGAGG00000004461PATL110084.097Gopherus_agassizii
ENSCGRG00001024927Patl110096.753ENSGGOG00000004335PATL110096.753Gorilla_gorilla
ENSCGRG00001024927Patl16335.714ENSGGOG00000025923PATL28535.318Gorilla_gorilla
ENSCGRG00001024927Patl15935.532ENSHBUG00000005929patl26136.754Haplochromis_burtoni
ENSCGRG00001024927Patl16266.667ENSHBUG00000005365patl18350.617Haplochromis_burtoni
ENSCGRG00001024927Patl110092.857ENSHGLG00000018173PATL110092.857Heterocephalus_glaber_female
ENSCGRG00001024927Patl19991.242ENSHGLG00100003453PATL110091.242Heterocephalus_glaber_male
ENSCGRG00001024927Patl19165.000ENSHCOG00000001898patl18253.165Hippocampus_comes
ENSCGRG00001024927Patl19930.721ENSHCOG00000016754patl26034.519Hippocampus_comes
ENSCGRG00001024927Patl16732.895ENSIPUG00000020692patl25835.129Ictalurus_punctatus
ENSCGRG00001024927Patl15437.590ENSSTOG00000033848PATL27237.590Ictidomys_tridecemlineatus
ENSCGRG00001024927Patl19896.306ENSSTOG00000013764PATL19996.306Ictidomys_tridecemlineatus
ENSCGRG00001024927Patl19995.157ENSJJAG00000010135Patl110095.157Jaculus_jaculus
ENSCGRG00001024927Patl16260.000ENSKMAG00000020848patl18063.333Kryptolebias_marmoratus
ENSCGRG00001024927Patl16135.220ENSLBEG00000022344patl25834.792Labrus_bergylta
ENSCGRG00001024927Patl19168.333ENSLBEG00000023617patl18158.025Labrus_bergylta
ENSCGRG00001024927Patl19856.697ENSLACG00000004640PATL19956.161Latimeria_chalumnae
ENSCGRG00001024927Patl19831.303ENSLACG00000005291-9730.797Latimeria_chalumnae
ENSCGRG00001024927Patl19947.439ENSLOCG00000000717patl19947.927Lepisosteus_oculatus
ENSCGRG00001024927Patl15138.107ENSLAFG00000031124PATL27138.107Loxodonta_africana
ENSCGRG00001024927Patl110096.109ENSLAFG00000015161PATL110096.109Loxodonta_africana
ENSCGRG00001024927Patl110096.623ENSMFAG00000040851PATL110096.623Macaca_fascicularis
ENSCGRG00001024927Patl110096.623ENSMMUG00000017287PATL110096.623Macaca_mulatta
ENSCGRG00001024927Patl110096.623ENSMNEG00000038692PATL110096.623Macaca_nemestrina
ENSCGRG00001024927Patl110096.494ENSMLEG00000030044PATL110096.494Mandrillus_leucophaeus
ENSCGRG00001024927Patl16134.322ENSMAMG00000013327patl26135.492Mastacembelus_armatus
ENSCGRG00001024927Patl19645.571ENSMAMG00000003950patl19847.441Mastacembelus_armatus
ENSCGRG00001024927Patl16266.667ENSMZEG00005013404patl18350.617Maylandia_zebra
ENSCGRG00001024927Patl18731.905ENSMZEG00005014292patl25437.470Maylandia_zebra
ENSCGRG00001024927Patl19277.560ENSMGAG00000003406PATL19976.545Meleagris_gallopavo
ENSCGRG00001024927Patl18599.080ENSMAUG00000012059Patl19799.080Mesocricetus_auratus
ENSCGRG00001024927Patl19992.438ENSMICG00000004172PATL19896.994Microcebus_murinus
ENSCGRG00001024927Patl15536.512ENSMOCG00000015367Patl27237.065Microtus_ochrogaster
ENSCGRG00001024927Patl110098.701ENSMOCG00000010087Patl110098.701Microtus_ochrogaster
ENSCGRG00001024927Patl19946.263ENSMMOG00000013711patl110045.278Mola_mola
ENSCGRG00001024927Patl16230.398ENSMMOG00000001299patl26032.057Mola_mola
ENSCGRG00001024927Patl16236.531ENSMODG00000017690PATL27136.993Monodelphis_domestica
ENSCGRG00001024927Patl110088.601ENSMODG00000020201PATL110087.953Monodelphis_domestica
ENSCGRG00001024927Patl17755.764ENSMALG00000018706patl19943.580Monopterus_albus
ENSCGRG00001024927Patl15434.845ENSMALG00000008131patl25234.845Monopterus_albus
ENSCGRG00001024927Patl110096.883MGP_CAROLIEiJ_G0022739Patl110096.883Mus_caroli
ENSCGRG00001024927Patl110097.013ENSMUSG00000046139Patl110097.013Mus_musculus
ENSCGRG00001024927Patl110096.623MGP_PahariEiJ_G0014233Patl110096.623Mus_pahari
ENSCGRG00001024927Patl110097.143MGP_SPRETEiJ_G0023652Patl110097.143Mus_spretus
ENSCGRG00001024927Patl110095.979ENSMPUG00000014607PATL110095.071Mustela_putorius_furo
ENSCGRG00001024927Patl110092.866ENSMLUG00000011169PATL110092.477Myotis_lucifugus
ENSCGRG00001024927Patl110095.349ENSNGAG00000003682Patl110095.349Nannospalax_galili
ENSCGRG00001024927Patl16234.917ENSNBRG00000011745patl25836.516Neolamprologus_brichardi
ENSCGRG00001024927Patl19993.194ENSNLEG00000013081PATL110093.063Nomascus_leucogenys
ENSCGRG00001024927Patl16335.714ENSNLEG00000005673PATL28535.318Nomascus_leucogenys
ENSCGRG00001024927Patl16790.968ENSMEUG00000009391PATL18990.968Notamacropus_eugenii
ENSCGRG00001024927Patl16895.707ENSOPRG00000007963PATL18095.707Ochotona_princeps
ENSCGRG00001024927Patl17390.438ENSODEG00000001792PATL19590.941Octodon_degus
ENSCGRG00001024927Patl16236.495ENSONIG00000011519patl25438.005Oreochromis_niloticus
ENSCGRG00001024927Patl16266.667ENSONIG00000004170patl110048.254Oreochromis_niloticus
ENSCGRG00001024927Patl15137.871ENSOANG00000001538-8438.025Ornithorhynchus_anatinus
ENSCGRG00001024927Patl15287.154ENSOANG00000011117-9787.154Ornithorhynchus_anatinus
ENSCGRG00001024927Patl16135.095ENSOCUG00000006339PATL27436.750Oryctolagus_cuniculus
ENSCGRG00001024927Patl110096.753ENSOCUG00000002156PATL110096.753Oryctolagus_cuniculus
ENSCGRG00001024927Patl16433.333ENSORLG00000005780patl26033.958Oryzias_latipes
ENSCGRG00001024927Patl16433.730ENSORLG00020016506patl26133.465Oryzias_latipes_hni
ENSCGRG00001024927Patl16433.532ENSORLG00015014500patl26333.267Oryzias_latipes_hsok
ENSCGRG00001024927Patl18731.965ENSOMEG00000021628patl26235.062Oryzias_melastigma
ENSCGRG00001024927Patl15436.562ENSOGAG00000004709PATL27236.562Otolemur_garnettii
ENSCGRG00001024927Patl110096.753ENSOGAG00000004351PATL110096.753Otolemur_garnettii
ENSCGRG00001024927Patl15238.025ENSOARG00000003762PATL27238.025Ovis_aries
ENSCGRG00001024927Patl19993.734ENSOARG00000012005PATL19693.734Ovis_aries
ENSCGRG00001024927Patl16335.845ENSPPAG00000007221PATL28435.318Pan_paniscus
ENSCGRG00001024927Patl110096.623ENSPPAG00000034275PATL110096.623Pan_paniscus
ENSCGRG00001024927Patl16235.306ENSPPRG00000004279PATL27336.473Panthera_pardus
ENSCGRG00001024927Patl19995.686ENSPPRG00000020639PATL110095.686Panthera_pardus
ENSCGRG00001024927Patl110095.714ENSPTIG00000019298PATL110095.714Panthera_tigris_altaica
ENSCGRG00001024927Patl16235.174ENSPTIG00000018964PATL27336.232Panthera_tigris_altaica
ENSCGRG00001024927Patl16335.510ENSPTRG00000041536PATL28435.113Pan_troglodytes
ENSCGRG00001024927Patl19987.958ENSPTRG00000003697PATL110087.958Pan_troglodytes
ENSCGRG00001024927Patl110096.623ENSPANG00000035620PATL110096.623Papio_anubis
ENSCGRG00001024927Patl19946.569ENSPKIG00000016224patl19947.672Paramormyrops_kingsleyae
ENSCGRG00001024927Patl15437.709ENSPSIG00000017690PATL29536.855Pelodiscus_sinensis
ENSCGRG00001024927Patl110083.571ENSPSIG00000016206PATL19683.053Pelodiscus_sinensis
ENSCGRG00001024927Patl15935.220ENSPMGG00000014550patl26336.105Periophthalmus_magnuspinnatus
ENSCGRG00001024927Patl16266.667ENSPMGG00000002644patl19945.388Periophthalmus_magnuspinnatus
ENSCGRG00001024927Patl110098.831ENSPEMG00000014215Patl110098.831Peromyscus_maniculatus_bairdii
ENSCGRG00001024927Patl15835.153ENSPEMG00000016509Patl27037.084Peromyscus_maniculatus_bairdii
ENSCGRG00001024927Patl16534.127ENSPCIG00000018256PATL27636.881Phascolarctos_cinereus
ENSCGRG00001024927Patl110088.731ENSPCIG00000010852PATL110088.083Phascolarctos_cinereus
ENSCGRG00001024927Patl19731.074ENSPFOG00000007305patl25437.349Poecilia_formosa
ENSCGRG00001024927Patl110046.007ENSPFOG00000007768patl110046.786Poecilia_formosa
ENSCGRG00001024927Patl15553.682ENSPLAG00000018465patl17550.989Poecilia_latipinna
ENSCGRG00001024927Patl19731.291ENSPLAG00000020713patl25437.349Poecilia_latipinna
ENSCGRG00001024927Patl19731.777ENSPMEG00000018942patl25437.349Poecilia_mexicana
ENSCGRG00001024927Patl18449.924ENSPMEG00000006555patl17550.302Poecilia_mexicana
ENSCGRG00001024927Patl17348.336ENSPREG00000003874patl17050.263Poecilia_reticulata
ENSCGRG00001024927Patl110097.013ENSPPYG00000003230PATL110097.013Pongo_abelii
ENSCGRG00001024927Patl15338.406ENSPCOG00000000295PATL29939.011Propithecus_coquereli
ENSCGRG00001024927Patl110096.494ENSPCOG00000020770PATL110096.494Propithecus_coquereli
ENSCGRG00001024927Patl18590.396ENSPVAG00000015239PATL110089.939Pteropus_vampyrus
ENSCGRG00001024927Patl15935.106ENSPNYG00000017381patl26136.277Pundamilia_nyererei
ENSCGRG00001024927Patl18653.172ENSPNYG00000018936patl19653.153Pundamilia_nyererei
ENSCGRG00001024927Patl19945.542ENSPNAG00000017907patl19946.867Pygocentrus_nattereri
ENSCGRG00001024927Patl16235.565ENSPNAG00000002315patl26334.728Pygocentrus_nattereri
ENSCGRG00001024927Patl110096.883ENSRNOG00000021052Patl110096.883Rattus_norvegicus
ENSCGRG00001024927Patl110086.460ENSRBIG00000032263PATL110086.460Rhinopithecus_bieti
ENSCGRG00001024927Patl110096.753ENSRROG00000032861PATL110096.753Rhinopithecus_roxellana
ENSCGRG00001024927Patl110096.494ENSSBOG00000025195PATL110096.494Saimiri_boliviensis_boliviensis
ENSCGRG00001024927Patl110089.276ENSSHAG00000004309PATL110088.630Sarcophilus_harrisii
ENSCGRG00001024927Patl18632.988ENSSFOG00015000720patl25537.204Scleropages_formosus
ENSCGRG00001024927Patl19944.593ENSSFOG00015009614patl19946.731Scleropages_formosus
ENSCGRG00001024927Patl16534.263ENSSMAG00000017262patl27433.597Scophthalmus_maximus
ENSCGRG00001024927Patl19161.667ENSSMAG00000009482patl18153.086Scophthalmus_maximus
ENSCGRG00001024927Patl16235.124ENSSDUG00000022927patl26034.161Seriola_dumerili
ENSCGRG00001024927Patl19268.333ENSSDUG00000005362patl17868.333Seriola_dumerili
ENSCGRG00001024927Patl16834.082ENSSLDG00000017922patl25936.538Seriola_lalandi_dorsalis
ENSCGRG00001024927Patl19266.667ENSSLDG00000019146patl17866.667Seriola_lalandi_dorsalis
ENSCGRG00001024927Patl15136.616ENSSARG00000009047PATL27636.616Sorex_araneus
ENSCGRG00001024927Patl18095.085ENSSARG00000009600PATL18095.085Sorex_araneus
ENSCGRG00001024927Patl110081.712ENSSPUG00000009453PATL110080.934Sphenodon_punctatus
ENSCGRG00001024927Patl15453.237ENSSPAG00000003187patl19847.153Stegastes_partitus
ENSCGRG00001024927Patl15735.011ENSSPAG00000004784patl26235.446Stegastes_partitus
ENSCGRG00001024927Patl110096.239ENSSSCG00000013124PATL110096.239Sus_scrofa
ENSCGRG00001024927Patl19979.793ENSTGUG00000006222PATL110079.740Taeniopygia_guttata
ENSCGRG00001024927Patl15237.284ENSTGUG00000004619-9837.624Taeniopygia_guttata
ENSCGRG00001024927Patl19161.667ENSTRUG00000000709patl19944.581Takifugu_rubripes
ENSCGRG00001024927Patl16234.238ENSTRUG00000005647patl26234.447Takifugu_rubripes
ENSCGRG00001024927Patl19094.406ENSTBEG00000000796PATL19094.406Tupaia_belangeri
ENSCGRG00001024927Patl17296.795ENSTTRG00000009389PATL18496.795Tursiops_truncatus
ENSCGRG00001024927Patl16234.969ENSUAMG00000018533PATL27136.232Ursus_americanus
ENSCGRG00001024927Patl16235.583ENSUMAG00000007738PATL27136.715Ursus_maritimus
ENSCGRG00001024927Patl19995.658ENSUMAG00000018634PATL110094.828Ursus_maritimus
ENSCGRG00001024927Patl16597.222ENSVPAG00000009224PATL17697.222Vicugna_pacos
ENSCGRG00001024927Patl16435.928ENSVVUG00000011576PATL27237.923Vulpes_vulpes
ENSCGRG00001024927Patl19995.698ENSVVUG00000016668PATL110094.971Vulpes_vulpes
ENSCGRG00001024927Patl15337.681ENSXETG00000014167patl27535.425Xenopus_tropicalis
ENSCGRG00001024927Patl16161.404ENSXCOG00000010808patl19861.404Xiphophorus_couchianus
ENSCGRG00001024927Patl16265.000ENSXMAG00000013834patl18265.000Xiphophorus_maculatus
ENSCGRG00001024927Patl19730.153ENSXMAG00000018464patl25437.108Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us