EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000000285 (Gene tree)
Gene ID: 102187563
Gene Symbol: DDX50
Alias: GU2|GUB|MGC3199|RH-II/GuB
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 31869 bases
Position: chr28:20427283-20459151
Accession: 102187563
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000000400	GUCT	PF08152.12	3.3e-28	1	1
ENSCHIP00000000401	GUCT	PF08152.12	2.6e-15	1	1
ENSCHIP00000000401	ResIII	PF04851.15	3.4e-10	1	1
ENSCHIP00000000400	ResIII	PF04851.15	3.7e-10	1	1
ENSCHIP00000000401	DEAD	PF00270.29	1.9e-47	1	1
ENSCHIP00000000400	DEAD	PF00270.29	2.1e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000000426	DDX50-202	2118	-	ENSCHIP00000000401	705 (aa)	-	UPI000D1930EF
ENSCHIT00000000425	DDX50-201	2217	XM_005699123	ENSCHIP00000000400	738 (aa)	XP_005699180	UPI0003AF52F8

Gene Model

Click here to download ENSCHIG00000000285's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000000285's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000000285	DDX50	51	34.933	ENSCHIG00000019280	DDX18	56	34.933
ENSCHIG00000000285	DDX50	50	32.603	ENSCHIG00000009756	DDX41	57	32.603
ENSCHIG00000000285	DDX50	50	35.196	ENSCHIG00000020582	-	57	35.196
ENSCHIG00000000285	DDX50	52	31.989	ENSCHIG00000012317	EIF4A2	90	31.014
ENSCHIG00000000285	DDX50	52	32.888	ENSCHIG00000024284	EIF4A3	86	32.888
ENSCHIG00000000285	DDX50	51	31.383	ENSCHIG00000010585	-	56	32.181
ENSCHIG00000000285	DDX50	52	32.440	ENSCHIG00000022153	EIF4A1	88	32.440
ENSCHIG00000000285	DDX50	50	35.196	ENSCHIG00000017351	-	53	35.196
ENSCHIG00000000285	DDX50	82	51.560	ENSCHIG00000014104	-	85	45.934
ENSCHIG00000000285	DDX50	51	31.649	ENSCHIG00000024903	-	52	33.239
ENSCHIG00000000285	DDX50	82	49.836	ENSCHIG00000006053	-	84	45.266
ENSCHIG00000000285	DDX50	58	33.175	ENSCHIG00000007753	DDX27	53	32.938
ENSCHIG00000000285	DDX50	51	34.417	ENSCHIG00000021332	DDX17	75	33.846
ENSCHIG00000000285	DDX50	51	33.243	ENSCHIG00000011800	DDX5	57	33.518
ENSCHIG00000000285	DDX50	93	59.639	ENSCHIG00000000248	-	74	68.459
ENSCHIG00000000285	DDX50	51	33.333	ENSCHIG00000026011	DDX47	75	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000000285	DDX50	99	97.151	ENSG00000107625	DDX50	100	97.151	Homo_sapiens
ENSCHIG00000000285	DDX50	99	96.748	ENSAMEG00000017992	DDX50	100	96.748	Ailuropoda_melanoleuca
ENSCHIG00000000285	DDX50	92	77.424	ENSANAG00000017785	-	100	78.800	Aotus_nancymaae
ENSCHIG00000000285	DDX50	99	98.372	ENSBTAG00000033413	DDX50	100	98.372	Bos_taurus
ENSCHIG00000000285	DDX50	99	97.286	ENSCJAG00000018844	DDX50	100	97.286	Callithrix_jacchus
ENSCHIG00000000285	DDX50	99	97.154	ENSCAFG00000013776	DDX50	100	97.234	Canis_familiaris
ENSCHIG00000000285	DDX50	100	97.158	ENSCAFG00020025977	DDX50	100	97.158	Canis_lupus_dingo
ENSCHIG00000000285	DDX50	99	96.608	ENSTSYG00000004192	DDX50	100	96.608	Carlito_syrichta
ENSCHIG00000000285	DDX50	88	78.638	ENSCAPG00000007230	-	97	79.690	Cavia_aperea
ENSCHIG00000000285	DDX50	99	95.794	ENSCPOG00000002131	-	100	95.794	Cavia_porcellus
ENSCHIG00000000285	DDX50	83	86.863	ENSCCAG00000030543	DDX50	100	87.500	Cebus_capucinus
ENSCHIG00000000285	DDX50	97	71.468	ENSCATG00000035153	-	89	89.655	Cercocebus_atys
ENSCHIG00000000285	DDX50	99	94.837	ENSCATG00000032463	DDX50	99	94.837	Cercocebus_atys
ENSCHIG00000000285	DDX50	99	60.383	ENSCATG00000039259	-	98	62.022	Cercocebus_atys
ENSCHIG00000000285	DDX50	96	70.927	ENSCLAG00000001938	-	91	71.669	Chinchilla_lanigera
ENSCHIG00000000285	DDX50	99	97.015	ENSCLAG00000012957	-	100	97.015	Chinchilla_lanigera
ENSCHIG00000000285	DDX50	50	87.263	ENSCLAG00000001553	-	95	87.263	Chinchilla_lanigera
ENSCHIG00000000285	DDX50	99	97.286	ENSCSAG00000007703	DDX50	100	97.286	Chlorocebus_sabaeus
ENSCHIG00000000285	DDX50	88	94.607	ENSCHOG00000000233	DDX50	97	94.607	Choloepus_hoffmanni
ENSCHIG00000000285	DDX50	99	83.446	ENSCANG00000036450	-	100	83.446	Colobus_angolensis_palliatus
ENSCHIG00000000285	DDX50	86	71.609	ENSCANG00000018820	-	88	72.870	Colobus_angolensis_palliatus
ENSCHIG00000000285	DDX50	96	68.392	ENSCANG00000028077	-	91	67.936	Colobus_angolensis_palliatus
ENSCHIG00000000285	DDX50	92	95.575	ENSCGRG00001020223	Ddx50	100	95.387	Cricetulus_griseus_chok1gshd
ENSCHIG00000000285	DDX50	91	95.704	ENSCGRG00000015884	Ddx50	100	94.980	Cricetulus_griseus_crigri
ENSCHIG00000000285	DDX50	89	89.968	ENSDNOG00000001675	DDX50	100	89.506	Dasypus_novemcinctus
ENSCHIG00000000285	DDX50	92	95.870	ENSDORG00000007310	Ddx50	100	95.658	Dipodomys_ordii
ENSCHIG00000000285	DDX50	82	98.473	ENSETEG00000014069	DDX50	90	96.239	Echinops_telfairi
ENSCHIG00000000285	DDX50	100	96.748	ENSEASG00005015595	DDX50	100	96.748	Equus_asinus_asinus
ENSCHIG00000000285	DDX50	100	96.883	ENSECAG00000023044	DDX50	100	96.883	Equus_caballus
ENSCHIG00000000285	DDX50	86	96.552	ENSEEUG00000005782	DDX50	86	96.552	Erinaceus_europaeus
ENSCHIG00000000285	DDX50	100	97.564	ENSFCAG00000012678	DDX50	100	97.564	Felis_catus
ENSCHIG00000000285	DDX50	92	89.233	ENSFDAG00000016109	-	100	89.688	Fukomys_damarensis
ENSCHIG00000000285	DDX50	51	82.275	ENSGGOG00000041063	-	96	81.481	Gorilla_gorilla
ENSCHIG00000000285	DDX50	52	70.833	ENSGGOG00000022568	-	90	79.503	Gorilla_gorilla
ENSCHIG00000000285	DDX50	99	97.151	ENSGGOG00000010100	DDX50	99	98.663	Gorilla_gorilla
ENSCHIG00000000285	DDX50	92	95.133	ENSHGLG00000013466	DDX50	100	94.980	Heterocephalus_glaber_female
ENSCHIG00000000285	DDX50	92	95.133	ENSHGLG00100017191	DDX50	100	94.980	Heterocephalus_glaber_male
ENSCHIG00000000285	DDX50	82	88.298	ENSHGLG00100006568	-	92	88.298	Heterocephalus_glaber_male
ENSCHIG00000000285	DDX50	99	95.122	ENSSTOG00000021852	-	100	94.851	Ictidomys_tridecemlineatus
ENSCHIG00000000285	DDX50	99	72.605	ENSJJAG00000019626	-	100	71.120	Jaculus_jaculus
ENSCHIG00000000285	DDX50	99	93.894	ENSJJAG00000023928	-	100	93.894	Jaculus_jaculus
ENSCHIG00000000285	DDX50	92	97.198	ENSLAFG00000006186	DDX50	100	96.065	Loxodonta_africana
ENSCHIG00000000285	DDX50	99	97.286	ENSMFAG00000044067	DDX50	100	97.286	Macaca_fascicularis
ENSCHIG00000000285	DDX50	97	71.191	ENSMFAG00000045339	-	89	88.715	Macaca_fascicularis
ENSCHIG00000000285	DDX50	80	68.136	ENSMMUG00000045343	-	88	61.659	Macaca_mulatta
ENSCHIG00000000285	DDX50	99	97.286	ENSMMUG00000001006	DDX50	100	97.768	Macaca_mulatta
ENSCHIG00000000285	DDX50	92	90.560	ENSMNEG00000031664	DDX50	100	90.909	Macaca_nemestrina
ENSCHIG00000000285	DDX50	97	72.690	ENSMNEG00000045530	-	89	89.969	Macaca_nemestrina
ENSCHIG00000000285	DDX50	92	95.428	ENSMLEG00000037313	DDX50	100	95.387	Mandrillus_leucophaeus
ENSCHIG00000000285	DDX50	86	83.645	ENSMLEG00000041988	-	89	87.339	Mandrillus_leucophaeus
ENSCHIG00000000285	DDX50	59	93.705	ENSMAUG00000022192	Ddx50	100	93.705	Mesocricetus_auratus
ENSCHIG00000000285	DDX50	99	89.281	ENSMICG00000017539	DDX50	100	89.281	Microcebus_murinus
ENSCHIG00000000285	DDX50	92	94.853	ENSMOCG00000001676	Ddx50	100	94.317	Microtus_ochrogaster
ENSCHIG00000000285	DDX50	92	80.352	ENSMODG00000010741	DDX50	92	81.341	Monodelphis_domestica
ENSCHIG00000000285	DDX50	92	93.658	MGP_CAROLIEiJ_G0015389	Ddx50	100	94.708	Mus_caroli
ENSCHIG00000000285	DDX50	92	94.543	ENSMUSG00000020076	Ddx50	100	94.980	Mus_musculus
ENSCHIG00000000285	DDX50	92	94.690	MGP_PahariEiJ_G0030805	Ddx50	100	95.115	Mus_pahari
ENSCHIG00000000285	DDX50	92	94.543	MGP_SPRETEiJ_G0016200	Ddx50	100	94.980	Mus_spretus
ENSCHIG00000000285	DDX50	89	96.830	ENSMPUG00000004589	DDX50	100	96.918	Mustela_putorius_furo
ENSCHIG00000000285	DDX50	92	95.428	ENSMLUG00000017590	DDX50	100	95.115	Myotis_lucifugus
ENSCHIG00000000285	DDX50	92	95.870	ENSNGAG00000004283	Ddx50	100	95.658	Nannospalax_galili
ENSCHIG00000000285	DDX50	99	97.151	ENSNLEG00000011631	DDX50	100	97.151	Nomascus_leucogenys
ENSCHIG00000000285	DDX50	88	67.634	ENSNLEG00000035506	-	88	78.193	Nomascus_leucogenys
ENSCHIG00000000285	DDX50	92	93.363	ENSOPRG00000001619	DDX50	100	91.452	Ochotona_princeps
ENSCHIG00000000285	DDX50	99	96.065	ENSODEG00000014597	-	100	96.065	Octodon_degus
ENSCHIG00000000285	DDX50	93	67.335	ENSOANG00000004776	DDX50	76	71.524	Ornithorhynchus_anatinus
ENSCHIG00000000285	DDX50	94	93.687	ENSOCUG00000002879	DDX50	100	93.360	Oryctolagus_cuniculus
ENSCHIG00000000285	DDX50	99	96.608	ENSOGAG00000001844	DDX50	100	96.608	Otolemur_garnettii
ENSCHIG00000000285	DDX50	100	99.458	ENSOARG00000005264	DDX50	100	99.458	Ovis_aries
ENSCHIG00000000285	DDX50	51	70.789	ENSPPAG00000026788	-	89	79.560	Pan_paniscus
ENSCHIG00000000285	DDX50	99	97.015	ENSPPAG00000040723	DDX50	100	97.015	Pan_paniscus
ENSCHIG00000000285	DDX50	99	97.561	ENSPPRG00000015826	DDX50	100	97.561	Panthera_pardus
ENSCHIG00000000285	DDX50	99	97.561	ENSPTIG00000008454	DDX50	100	97.561	Panthera_tigris_altaica
ENSCHIG00000000285	DDX50	99	97.015	ENSPTRG00000002562	DDX50	100	97.015	Pan_troglodytes
ENSCHIG00000000285	DDX50	51	70.789	ENSPTRG00000044913	-	99	72.105	Pan_troglodytes
ENSCHIG00000000285	DDX50	92	89.823	ENSPANG00000022143	-	100	90.231	Papio_anubis
ENSCHIG00000000285	DDX50	92	94.248	ENSPEMG00000020899	-	100	92.402	Peromyscus_maniculatus_bairdii
ENSCHIG00000000285	DDX50	91	80.294	ENSPCIG00000016036	DDX50	93	81.402	Phascolarctos_cinereus
ENSCHIG00000000285	DDX50	91	97.619	ENSPPYG00000002390	DDX50	100	97.619	Pongo_abelii
ENSCHIG00000000285	DDX50	85	81.864	ENSPCAG00000009692	DDX50	100	82.305	Procavia_capensis
ENSCHIG00000000285	DDX50	79	84.848	ENSPCOG00000012574	DDX50	90	85.000	Propithecus_coquereli
ENSCHIG00000000285	DDX50	86	94.766	ENSPVAG00000009519	DDX50	86	94.766	Pteropus_vampyrus
ENSCHIG00000000285	DDX50	92	93.953	ENSRNOG00000000396	Ddx50	98	98.128	Rattus_norvegicus
ENSCHIG00000000285	DDX50	99	68.076	ENSRBIG00000036573	-	92	68.101	Rhinopithecus_bieti
ENSCHIG00000000285	DDX50	99	66.576	ENSRBIG00000039673	-	90	65.932	Rhinopithecus_bieti
ENSCHIG00000000285	DDX50	89	95.853	ENSRBIG00000042841	-	98	97.423	Rhinopithecus_bieti
ENSCHIG00000000285	DDX50	99	97.015	ENSRROG00000032158	DDX50	100	97.325	Rhinopithecus_roxellana
ENSCHIG00000000285	DDX50	99	65.761	ENSRROG00000022853	-	91	64.993	Rhinopithecus_roxellana
ENSCHIG00000000285	DDX50	52	69.974	ENSRROG00000031940	-	87	75.077	Rhinopithecus_roxellana
ENSCHIG00000000285	DDX50	92	85.841	ENSSBOG00000014441	DDX50	100	86.431	Saimiri_boliviensis_boliviensis
ENSCHIG00000000285	DDX50	84	65.252	ENSSHAG00000005334	-	85	64.341	Sarcophilus_harrisii
ENSCHIG00000000285	DDX50	88	81.307	ENSSHAG00000005690	DDX50	91	81.364	Sarcophilus_harrisii
ENSCHIG00000000285	DDX50	99	79.647	ENSSARG00000013553	DDX50	88	87.442	Sorex_araneus
ENSCHIG00000000285	DDX50	100	95.664	ENSSSCG00000010246	DDX50	100	95.664	Sus_scrofa
ENSCHIG00000000285	DDX50	96	74.824	ENSTBEG00000001085	DDX50	97	75.419	Tupaia_belangeri
ENSCHIG00000000285	DDX50	99	90.502	ENSTTRG00000012408	DDX50	99	90.502	Tursiops_truncatus
ENSCHIG00000000285	DDX50	99	97.019	ENSUAMG00000010976	DDX50	99	98.123	Ursus_americanus
ENSCHIG00000000285	DDX50	100	97.023	ENSUMAG00000007726	DDX50	100	97.023	Ursus_maritimus
ENSCHIG00000000285	DDX50	99	96.879	ENSVPAG00000000626	DDX50	100	96.879	Vicugna_pacos
ENSCHIG00000000285	DDX50	85	91.874	ENSVVUG00000020366	DDX50	98	98.396	Vulpes_vulpes