EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000000312 (Gene tree)
Gene ID: 102171770
Gene Symbol: HTATSF1
Alias: TAT-SF1
Full Name: HIV-1 Tat specific factor 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 16673 bases
Position: chrLWLT01000027.1:10559040-10575712
Accession: 102171770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000000440	RRM_1	PF00076.22	3.6e-17	1	2
ENSCHIP00000000440	RRM_1	PF00076.22	3.6e-17	2	2
ENSCHIP00000000439	RRM_1	PF00076.22	3.9e-17	1	2
ENSCHIP00000000439	RRM_1	PF00076.22	3.9e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000000464	HTATSF1-201	3602	XM_018044215	ENSCHIP00000000439	774 (aa)	XP_017899704	UPI000847AB02
ENSCHIT00000000465	HTATSF1-202	2271	-	ENSCHIP00000000440	756 (aa)	-	UPI000D198099

Gene Model

Click here to download ENSCHIG00000000312's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000000312's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000000312	HTATSF1	99	81.092	ENSG00000102241	HTATSF1	100	91.803	Homo_sapiens
ENSCHIG00000000312	HTATSF1	54	62.118	ENSAPOG00000009823	htatsf1	92	60.377	Acanthochromis_polyacanthus
ENSCHIG00000000312	HTATSF1	99	82.705	ENSAMEG00000002921	HTATSF1	99	81.404	Ailuropoda_melanoleuca
ENSCHIG00000000312	HTATSF1	50	64.213	ENSAOCG00000020994	htatsf1	92	58.333	Amphiprion_ocellaris
ENSCHIG00000000312	HTATSF1	50	64.213	ENSAPEG00000016432	htatsf1	92	58.352	Amphiprion_percula
ENSCHIG00000000312	HTATSF1	51	62.129	ENSATEG00000008903	htatsf1	89	61.787	Anabas_testudineus
ENSCHIG00000000312	HTATSF1	93	76.521	ENSANAG00000025458	-	99	76.562	Aotus_nancymaae
ENSCHIG00000000312	HTATSF1	95	69.209	ENSANAG00000027986	-	96	69.220	Aotus_nancymaae
ENSCHIG00000000312	HTATSF1	99	98.962	ENSBTAG00000054942	HTATSF1	99	98.962	Bos_taurus
ENSCHIG00000000312	HTATSF1	99	98.962	ENSBTAG00000055212	HTATSF1	99	98.962	Bos_taurus
ENSCHIG00000000312	HTATSF1	100	88.360	ENSBTAG00000032711	HTATSF1	100	88.492	Bos_taurus
ENSCHIG00000000312	HTATSF1	99	80.132	ENSCJAG00000003676	HTATSF1	99	79.361	Callithrix_jacchus
ENSCHIG00000000312	HTATSF1	99	81.948	ENSCAFG00000023294	HTATSF1	99	81.323	Canis_familiaris
ENSCHIG00000000312	HTATSF1	99	81.948	ENSCAFG00020024635	HTATSF1	99	81.323	Canis_lupus_dingo
ENSCHIG00000000312	HTATSF1	99	80.826	ENSTSYG00000028876	HTATSF1	99	81.383	Carlito_syrichta
ENSCHIG00000000312	HTATSF1	99	76.064	ENSCCAG00000025329	-	99	76.133	Cebus_capucinus
ENSCHIG00000000312	HTATSF1	99	80.345	ENSCCAG00000022701	-	99	80.800	Cebus_capucinus
ENSCHIG00000000312	HTATSF1	99	80.774	ENSCATG00000029963	HTATSF1	99	81.649	Cercocebus_atys
ENSCHIG00000000312	HTATSF1	99	73.325	ENSCLAG00000002718	HTATSF1	99	71.883	Chinchilla_lanigera
ENSCHIG00000000312	HTATSF1	99	80.908	ENSCSAG00000007505	HTATSF1	99	81.782	Chlorocebus_sabaeus
ENSCHIG00000000312	HTATSF1	50	70.130	ENSCPBG00000026092	HTATSF1	89	69.293	Chrysemys_picta_bellii
ENSCHIG00000000312	HTATSF1	99	80.774	ENSCANG00000028495	HTATSF1	99	81.649	Colobus_angolensis_palliatus
ENSCHIG00000000312	HTATSF1	99	73.891	ENSCGRG00001021602	Htatsf1	99	74.300	Cricetulus_griseus_chok1gshd
ENSCHIG00000000312	HTATSF1	91	67.906	ENSCGRG00000002085	Htatsf1	99	68.188	Cricetulus_griseus_crigri
ENSCHIG00000000312	HTATSF1	53	59.512	ENSDARG00000056649	htatsf1	89	59.512	Danio_rerio
ENSCHIG00000000312	HTATSF1	99	77.344	ENSDNOG00000002254	HTATSF1	99	77.344	Dasypus_novemcinctus
ENSCHIG00000000312	HTATSF1	90	44.721	ENSETEG00000006377	-	75	48.073	Echinops_telfairi
ENSCHIG00000000312	HTATSF1	99	82.660	ENSEASG00005003440	HTATSF1	99	84.094	Equus_asinus_asinus
ENSCHIG00000000312	HTATSF1	99	82.529	ENSECAG00000009156	HTATSF1	99	83.963	Equus_caballus
ENSCHIG00000000312	HTATSF1	99	70.558	ENSEEUG00000010668	HTATSF1	99	70.428	Erinaceus_europaeus
ENSCHIG00000000312	HTATSF1	99	81.548	ENSFCAG00000031924	HTATSF1	99	80.729	Felis_catus
ENSCHIG00000000312	HTATSF1	51	68.687	ENSFALG00000003728	HTATSF1	91	65.783	Ficedula_albicollis
ENSCHIG00000000312	HTATSF1	99	71.731	ENSFDAG00000008617	HTATSF1	99	72.368	Fukomys_damarensis
ENSCHIG00000000312	HTATSF1	53	65.707	ENSGALG00000006410	HTATSF1	90	65.217	Gallus_gallus
ENSCHIG00000000312	HTATSF1	99	80.959	ENSGGOG00000026072	HTATSF1	99	81.782	Gorilla_gorilla
ENSCHIG00000000312	HTATSF1	98	73.494	ENSHGLG00000005328	HTATSF1	99	71.788	Heterocephalus_glaber_female
ENSCHIG00000000312	HTATSF1	50	62.341	ENSHCOG00000009056	htatsf1	92	59.214	Hippocampus_comes
ENSCHIG00000000312	HTATSF1	99	79.578	ENSSTOG00000012505	HTATSF1	98	79.369	Ictidomys_tridecemlineatus
ENSCHIG00000000312	HTATSF1	99	70.712	ENSLAFG00000014307	HTATSF1	99	70.976	Loxodonta_africana
ENSCHIG00000000312	HTATSF1	99	80.641	ENSMFAG00000044705	HTATSF1	99	81.516	Macaca_fascicularis
ENSCHIG00000000312	HTATSF1	99	80.641	ENSMMUG00000006450	HTATSF1	99	81.516	Macaca_mulatta
ENSCHIG00000000312	HTATSF1	99	76.439	ENSMNEG00000024084	HTATSF1	99	76.235	Macaca_nemestrina
ENSCHIG00000000312	HTATSF1	99	80.641	ENSMLEG00000035511	HTATSF1	99	81.516	Mandrillus_leucophaeus
ENSCHIG00000000312	HTATSF1	50	64.975	ENSMAMG00000021225	htatsf1	87	63.613	Mastacembelus_armatus
ENSCHIG00000000312	HTATSF1	99	72.881	ENSMAUG00000007235	Htatsf1	99	71.691	Mesocricetus_auratus
ENSCHIG00000000312	HTATSF1	99	79.481	ENSMICG00000009348	HTATSF1	99	79.009	Microcebus_murinus
ENSCHIG00000000312	HTATSF1	99	71.995	ENSMOCG00000022370	-	95	70.159	Microtus_ochrogaster
ENSCHIG00000000312	HTATSF1	99	72.962	ENSMOCG00000023007	-	99	72.621	Microtus_ochrogaster
ENSCHIG00000000312	HTATSF1	52	63.107	ENSMMOG00000011013	htatsf1	90	62.287	Mola_mola
ENSCHIG00000000312	HTATSF1	50	71.802	ENSMODG00000014087	-	84	71.802	Monodelphis_domestica
ENSCHIG00000000312	HTATSF1	51	62.500	ENSMALG00000019977	htatsf1	88	60.784	Monopterus_albus
ENSCHIG00000000312	HTATSF1	99	72.751	MGP_CAROLIEiJ_G0033094	Htatsf1	99	73.026	Mus_caroli
ENSCHIG00000000312	HTATSF1	98	73.307	ENSMUSG00000067873	Htatsf1	99	73.360	Mus_musculus
ENSCHIG00000000312	HTATSF1	98	73.174	MGP_SPRETEiJ_G0034249	Htatsf1	99	73.622	Mus_spretus
ENSCHIG00000000312	HTATSF1	99	82.323	ENSMPUG00000001901	HTATSF1	99	81.688	Mustela_putorius_furo
ENSCHIG00000000312	HTATSF1	99	75.587	ENSMLUG00000028418	-	99	75.587	Myotis_lucifugus
ENSCHIG00000000312	HTATSF1	99	71.696	ENSMLUG00000009234	-	98	68.831	Myotis_lucifugus
ENSCHIG00000000312	HTATSF1	98	76.447	ENSNGAG00000017831	Htatsf1	99	73.768	Nannospalax_galili
ENSCHIG00000000312	HTATSF1	99	80.826	ENSNLEG00000002746	HTATSF1	99	81.782	Nomascus_leucogenys
ENSCHIG00000000312	HTATSF1	99	75.840	ENSOCUG00000012570	HTATSF1	99	76.883	Oryctolagus_cuniculus
ENSCHIG00000000312	HTATSF1	98	76.975	ENSOGAG00000005565	HTATSF1	99	76.954	Otolemur_garnettii
ENSCHIG00000000312	HTATSF1	99	90.803	ENSOARG00000000481	-	99	90.980	Ovis_aries
ENSCHIG00000000312	HTATSF1	100	99.354	ENSOARG00000011215	-	100	99.354	Ovis_aries
ENSCHIG00000000312	HTATSF1	99	81.092	ENSPPAG00000024268	HTATSF1	99	81.915	Pan_paniscus
ENSCHIG00000000312	HTATSF1	99	80.890	ENSPPRG00000014209	HTATSF1	99	80.053	Panthera_pardus
ENSCHIG00000000312	HTATSF1	93	79.972	ENSPTIG00000016887	HTATSF1	95	79.060	Panthera_tigris_altaica
ENSCHIG00000000312	HTATSF1	99	81.092	ENSPTRG00000044591	HTATSF1	99	81.915	Pan_troglodytes
ENSCHIG00000000312	HTATSF1	99	68.975	ENSPANG00000010946	HTATSF1	99	84.615	Papio_anubis
ENSCHIG00000000312	HTATSF1	54	61.962	ENSPKIG00000024852	htatsf1	93	61.483	Paramormyrops_kingsleyae
ENSCHIG00000000312	HTATSF1	52	61.353	ENSPMGG00000006172	htatsf1	93	58.645	Periophthalmus_magnuspinnatus
ENSCHIG00000000312	HTATSF1	98	72.812	ENSPEMG00000022397	Htatsf1	99	73.456	Peromyscus_maniculatus_bairdii
ENSCHIG00000000312	HTATSF1	51	66.838	ENSPCIG00000018896	-	87	66.838	Phascolarctos_cinereus
ENSCHIG00000000312	HTATSF1	51	64.286	ENSPFOG00000007871	htatsf1	87	63.260	Poecilia_formosa
ENSCHIG00000000312	HTATSF1	51	63.793	ENSPLAG00000007532	htatsf1	89	63.300	Poecilia_latipinna
ENSCHIG00000000312	HTATSF1	51	64.286	ENSPMEG00000000352	htatsf1	89	64.039	Poecilia_mexicana
ENSCHIG00000000312	HTATSF1	50	65.736	ENSPREG00000007811	htatsf1	87	65.228	Poecilia_reticulata
ENSCHIG00000000312	HTATSF1	85	82.215	ENSPPYG00000020765	HTATSF1	82	82.742	Pongo_abelii
ENSCHIG00000000312	HTATSF1	97	68.970	ENSPCAG00000010576	HTATSF1	99	66.184	Procavia_capensis
ENSCHIG00000000312	HTATSF1	99	81.806	ENSPCOG00000021823	HTATSF1	99	81.308	Propithecus_coquereli
ENSCHIG00000000312	HTATSF1	98	75.766	ENSPVAG00000010281	HTATSF1	99	75.798	Pteropus_vampyrus
ENSCHIG00000000312	HTATSF1	99	73.885	ENSRNOG00000027761	Htatsf1	99	74.165	Rattus_norvegicus
ENSCHIG00000000312	HTATSF1	99	70.360	ENSRBIG00000035486	HTATSF1	99	71.277	Rhinopithecus_bieti
ENSCHIG00000000312	HTATSF1	99	80.507	ENSRROG00000021939	HTATSF1	99	81.383	Rhinopithecus_roxellana
ENSCHIG00000000312	HTATSF1	99	76.627	ENSSBOG00000017914	-	99	77.230	Saimiri_boliviensis_boliviensis
ENSCHIG00000000312	HTATSF1	99	78.581	ENSSBOG00000027186	-	99	79.600	Saimiri_boliviensis_boliviensis
ENSCHIG00000000312	HTATSF1	51	68.475	ENSSHAG00000006440	-	99	68.475	Sarcophilus_harrisii
ENSCHIG00000000312	HTATSF1	50	63.802	ENSSFOG00015012002	htatsf1	82	62.663	Scleropages_formosus
ENSCHIG00000000312	HTATSF1	53	61.538	ENSSLDG00000016880	htatsf1	94	59.122	Seriola_lalandi_dorsalis
ENSCHIG00000000312	HTATSF1	99	65.217	ENSSARG00000005193	HTATSF1	98	64.714	Sorex_araneus
ENSCHIG00000000312	HTATSF1	50	68.831	ENSSPUG00000014767	HTATSF1	84	68.912	Sphenodon_punctatus
ENSCHIG00000000312	HTATSF1	51	64.179	ENSSPAG00000000732	htatsf1	89	61.205	Stegastes_partitus
ENSCHIG00000000312	HTATSF1	99	79.787	ENSSSCG00000023062	HTATSF1	98	80.452	Sus_scrofa
ENSCHIG00000000312	HTATSF1	51	64.677	ENSTNIG00000016140	htatsf1	88	63.184	Tetraodon_nigroviridis
ENSCHIG00000000312	HTATSF1	91	77.812	ENSTTRG00000002269	HTATSF1	93	78.477	Tursiops_truncatus
ENSCHIG00000000312	HTATSF1	99	82.718	ENSUAMG00000012048	HTATSF1	99	81.516	Ursus_americanus
ENSCHIG00000000312	HTATSF1	99	83.226	ENSUMAG00000010393	HTATSF1	99	82.055	Ursus_maritimus
ENSCHIG00000000312	HTATSF1	91	81.073	ENSVPAG00000004569	HTATSF1	99	81.073	Vicugna_pacos
ENSCHIG00000000312	HTATSF1	99	81.818	ENSVVUG00000024802	HTATSF1	99	81.193	Vulpes_vulpes
ENSCHIG00000000312	HTATSF1	50	67.282	ENSXCOG00000006912	htatsf1	87	67.196	Xiphophorus_couchianus
ENSCHIG00000000312	HTATSF1	50	66.927	ENSXMAG00000000490	htatsf1	86	66.406	Xiphophorus_maculatus