EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000000487 (Gene tree)
Gene ID: 102175426
Gene Symbol: PUS1
Alias: -
Full Name: pseudouridine synthase 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 13246 bases
Position: chr17:26033835-26047080
Accession: 102175426
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000000697	PseudoU_synth_1	PF01416.20	6.1e-15	1	1
ENSCHIP00000000695	PseudoU_synth_1	PF01416.20	7.5e-15	1	1
ENSCHIP00000000696	PseudoU_synth_1	PF01416.20	8.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000000723	PUS1-201	1254	-	ENSCHIP00000000695	417 (aa)	-	UPI000D1915F4
ENSCHIT00000000725	PUS1-203	4578	XM_018061436	ENSCHIP00000000697	400 (aa)	XP_017916925	UPI000847137B
ENSCHIT00000000724	PUS1-202	1287	XM_018061435	ENSCHIP00000000696	428 (aa)	XP_017916924	UPI000D196D4D

Gene Model

Click here to download ENSCHIG00000000487's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000000487's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000000487	PUS1	100	83.250	ENSG00000177192	PUS1	100	83.896	Homo_sapiens
ENSCHIG00000000487	PUS1	92	67.209	ENSAPOG00000007254	pus1	87	67.209	Acanthochromis_polyacanthus
ENSCHIG00000000487	PUS1	99	86.294	ENSAMEG00000013715	PUS1	97	85.961	Ailuropoda_melanoleuca
ENSCHIG00000000487	PUS1	86	71.304	ENSACIG00000009169	pus1	84	71.304	Amphilophus_citrinellus
ENSCHIG00000000487	PUS1	92	68.835	ENSAOCG00000022207	pus1	87	68.835	Amphiprion_ocellaris
ENSCHIG00000000487	PUS1	92	68.835	ENSAPEG00000006039	pus1	93	68.835	Amphiprion_percula
ENSCHIG00000000487	PUS1	88	68.715	ENSATEG00000020688	pus1	92	68.715	Anabas_testudineus
ENSCHIG00000000487	PUS1	91	75.000	ENSACAG00000007367	PUS1	96	75.766	Anolis_carolinensis
ENSCHIG00000000487	PUS1	82	87.423	ENSANAG00000036192	PUS1	100	87.423	Aotus_nancymaae
ENSCHIG00000000487	PUS1	87	68.732	ENSACLG00000020868	pus1	91	68.732	Astatotilapia_calliptera
ENSCHIG00000000487	PUS1	88	69.231	ENSAMXG00000008710	pus1	80	70.349	Astyanax_mexicanus
ENSCHIG00000000487	PUS1	100	98.500	ENSBTAG00000012990	PUS1	100	98.500	Bos_taurus
ENSCHIG00000000487	PUS1	86	37.950	WBGene00004248	pus-1	86	37.950	Caenorhabditis_elegans
ENSCHIG00000000487	PUS1	64	87.402	ENSCJAG00000003720	PUS1	73	86.517	Callithrix_jacchus
ENSCHIG00000000487	PUS1	99	86.181	ENSCAFG00000006429	PUS1	100	86.181	Canis_familiaris
ENSCHIG00000000487	PUS1	99	86.181	ENSCAFG00020010737	PUS1	100	83.527	Canis_lupus_dingo
ENSCHIG00000000487	PUS1	92	86.992	ENSTSYG00000032605	PUS1	100	86.992	Carlito_syrichta
ENSCHIG00000000487	PUS1	75	89.933	ENSCAPG00000006421	PUS1	99	87.500	Cavia_aperea
ENSCHIG00000000487	PUS1	99	78.404	ENSCPOG00000001027	PUS1	99	78.873	Cavia_porcellus
ENSCHIG00000000487	PUS1	100	83.500	ENSCCAG00000015879	PUS1	100	80.600	Cebus_capucinus
ENSCHIG00000000487	PUS1	100	83.250	ENSCATG00000032870	PUS1	97	81.775	Cercocebus_atys
ENSCHIG00000000487	PUS1	99	79.577	ENSCLAG00000011689	PUS1	99	79.343	Chinchilla_lanigera
ENSCHIG00000000487	PUS1	100	84.000	ENSCSAG00000001879	PUS1	97	82.254	Chlorocebus_sabaeus
ENSCHIG00000000487	PUS1	77	82.736	ENSCPBG00000024715	PUS1	92	79.331	Chrysemys_picta_bellii
ENSCHIG00000000487	PUS1	87	43.182	ENSCING00000009426	-	94	43.182	Ciona_intestinalis
ENSCHIG00000000487	PUS1	80	44.201	ENSCSAVG00000003751	-	66	44.201	Ciona_savignyi
ENSCHIG00000000487	PUS1	100	74.250	ENSCANG00000035561	PUS1	99	74.250	Colobus_angolensis_palliatus
ENSCHIG00000000487	PUS1	100	82.500	ENSCGRG00001019592	Pus1	98	81.446	Cricetulus_griseus_chok1gshd
ENSCHIG00000000487	PUS1	100	82.500	ENSCGRG00000004048	Pus1	100	83.544	Cricetulus_griseus_crigri
ENSCHIG00000000487	PUS1	86	68.786	ENSCSEG00000003629	pus1	82	68.895	Cynoglossus_semilaevis
ENSCHIG00000000487	PUS1	91	67.397	ENSCVAG00000001265	pus1	88	67.397	Cyprinodon_variegatus
ENSCHIG00000000487	PUS1	86	65.889	ENSDARG00000045562	pus1	95	66.667	Danio_rerio
ENSCHIG00000000487	PUS1	96	78.646	ENSDNOG00000045576	PUS1	99	82.154	Dasypus_novemcinctus
ENSCHIG00000000487	PUS1	82	88.650	ENSDORG00000011455	Pus1	100	88.650	Dipodomys_ordii
ENSCHIG00000000487	PUS1	90	44.474	FBgn0038811	PUS1	90	44.474	Drosophila_melanogaster
ENSCHIG00000000487	PUS1	93	78.933	ENSETEG00000019160	PUS1	96	76.845	Echinops_telfairi
ENSCHIG00000000487	PUS1	86	41.033	ENSEBUG00000000368	-	68	41.129	Eptatretus_burgeri
ENSCHIG00000000487	PUS1	100	89.055	ENSEASG00005016535	PUS1	100	86.667	Equus_asinus_asinus
ENSCHIG00000000487	PUS1	100	89.801	ENSECAG00000006965	PUS1	100	89.801	Equus_caballus
ENSCHIG00000000487	PUS1	95	64.232	ENSELUG00000010424	pus1	95	64.232	Esox_lucius
ENSCHIG00000000487	PUS1	99	87.817	ENSFCAG00000010780	PUS1	96	87.469	Felis_catus
ENSCHIG00000000487	PUS1	97	73.604	ENSFALG00000008273	PUS1	99	71.564	Ficedula_albicollis
ENSCHIG00000000487	PUS1	94	84.881	ENSFDAG00000012518	PUS1	98	81.327	Fukomys_damarensis
ENSCHIG00000000487	PUS1	90	67.956	ENSFHEG00000010504	pus1	88	67.956	Fundulus_heteroclitus
ENSCHIG00000000487	PUS1	86	68.406	ENSGMOG00000008143	pus1	89	68.406	Gadus_morhua
ENSCHIG00000000487	PUS1	95	76.104	ENSGALG00000002354	PUS1	91	78.167	Gallus_gallus
ENSCHIG00000000487	PUS1	99	63.000	ENSGAFG00000006578	pus1	95	63.000	Gambusia_affinis
ENSCHIG00000000487	PUS1	92	66.216	ENSGACG00000017566	pus1	94	66.216	Gasterosteus_aculeatus
ENSCHIG00000000487	PUS1	83	79.819	ENSGAGG00000016730	-	94	79.819	Gopherus_agassizii
ENSCHIG00000000487	PUS1	100	83.500	ENSGGOG00000009178	PUS1	97	81.971	Gorilla_gorilla
ENSCHIG00000000487	PUS1	87	69.014	ENSHBUG00000001316	pus1	91	69.014	Haplochromis_burtoni
ENSCHIG00000000487	PUS1	95	81.842	ENSHGLG00000016086	PUS1	100	80.662	Heterocephalus_glaber_female
ENSCHIG00000000487	PUS1	95	81.579	ENSHGLG00100019362	PUS1	100	80.662	Heterocephalus_glaber_male
ENSCHIG00000000487	PUS1	93	66.400	ENSHCOG00000014288	pus1	86	66.400	Hippocampus_comes
ENSCHIG00000000487	PUS1	86	72.222	ENSIPUG00000010387	pus1	86	72.222	Ictalurus_punctatus
ENSCHIG00000000487	PUS1	98	81.818	ENSSTOG00000011245	PUS1	99	80.374	Ictidomys_tridecemlineatus
ENSCHIG00000000487	PUS1	100	80.500	ENSJJAG00000000088	Pus1	98	79.036	Jaculus_jaculus
ENSCHIG00000000487	PUS1	86	67.341	ENSKMAG00000012702	pus1	83	67.341	Kryptolebias_marmoratus
ENSCHIG00000000487	PUS1	91	65.684	ENSLBEG00000002845	pus1	92	65.684	Labrus_bergylta
ENSCHIG00000000487	PUS1	80	56.075	ENSLACG00000016044	-	97	56.075	Latimeria_chalumnae
ENSCHIG00000000487	PUS1	87	74.930	ENSLACG00000018598	PUS1	95	71.429	Latimeria_chalumnae
ENSCHIG00000000487	PUS1	89	76.045	ENSLOCG00000006127	pus1	91	76.045	Lepisosteus_oculatus
ENSCHIG00000000487	PUS1	93	81.402	ENSLAFG00000028731	PUS1	100	81.402	Loxodonta_africana
ENSCHIG00000000487	PUS1	100	83.750	ENSMFAG00000041194	PUS1	99	83.750	Macaca_fascicularis
ENSCHIG00000000487	PUS1	100	82.544	ENSMMUG00000031463	PUS1	99	84.416	Macaca_mulatta
ENSCHIG00000000487	PUS1	100	83.500	ENSMNEG00000002814	PUS1	97	82.014	Macaca_nemestrina
ENSCHIG00000000487	PUS1	82	88.037	ENSMLEG00000043560	PUS1	100	88.037	Mandrillus_leucophaeus
ENSCHIG00000000487	PUS1	87	67.042	ENSMAMG00000007371	pus1	87	65.761	Mastacembelus_armatus
ENSCHIG00000000487	PUS1	87	69.014	ENSMZEG00005017746	pus1	84	69.014	Maylandia_zebra
ENSCHIG00000000487	PUS1	82	80.243	ENSMGAG00000001958	PUS1	100	80.243	Meleagris_gallopavo
ENSCHIG00000000487	PUS1	100	82.500	ENSMAUG00000001482	Pus1	98	81.446	Mesocricetus_auratus
ENSCHIG00000000487	PUS1	99	83.000	ENSMICG00000030980	PUS1	99	83.000	Microcebus_murinus
ENSCHIG00000000487	PUS1	100	82.250	ENSMOCG00000022311	Pus1	98	81.205	Microtus_ochrogaster
ENSCHIG00000000487	PUS1	92	65.535	ENSMMOG00000021022	pus1	98	65.535	Mola_mola
ENSCHIG00000000487	PUS1	97	77.041	ENSMODG00000015551	PUS1	88	78.061	Monodelphis_domestica
ENSCHIG00000000487	PUS1	95	61.290	ENSMALG00000013202	pus1	96	61.845	Monopterus_albus
ENSCHIG00000000487	PUS1	100	82.750	MGP_CAROLIEiJ_G0027551	Pus1	100	83.797	Mus_caroli
ENSCHIG00000000487	PUS1	100	82.750	ENSMUSG00000029507	Pus1	100	83.797	Mus_musculus
ENSCHIG00000000487	PUS1	100	82.500	MGP_PahariEiJ_G0024133	Pus1	100	83.544	Mus_pahari
ENSCHIG00000000487	PUS1	100	82.750	MGP_SPRETEiJ_G0028549	Pus1	100	83.797	Mus_spretus
ENSCHIG00000000487	PUS1	99	87.310	ENSMPUG00000002314	PUS1	100	87.310	Mustela_putorius_furo
ENSCHIG00000000487	PUS1	92	87.193	ENSMLUG00000015790	PUS1	100	87.193	Myotis_lucifugus
ENSCHIG00000000487	PUS1	99	83.123	ENSNGAG00000012976	Pus1	98	81.928	Nannospalax_galili
ENSCHIG00000000487	PUS1	86	70.435	ENSNBRG00000020502	pus1	93	70.435	Neolamprologus_brichardi
ENSCHIG00000000487	PUS1	95	84.656	ENSNLEG00000008505	PUS1	100	88.644	Nomascus_leucogenys
ENSCHIG00000000487	PUS1	86	71.720	ENSMEUG00000002825	PUS1	99	67.460	Notamacropus_eugenii
ENSCHIG00000000487	PUS1	95	74.211	ENSOPRG00000002701	-	99	74.211	Ochotona_princeps
ENSCHIG00000000487	PUS1	99	80.451	ENSODEG00000008248	PUS1	100	82.292	Octodon_degus
ENSCHIG00000000487	PUS1	86	69.143	ENSONIG00000003803	pus1	86	72.039	Oreochromis_niloticus
ENSCHIG00000000487	PUS1	90	77.901	ENSOANG00000010619	PUS1	95	71.566	Ornithorhynchus_anatinus
ENSCHIG00000000487	PUS1	93	86.059	ENSOCUG00000007310	PUS1	83	85.564	Oryctolagus_cuniculus
ENSCHIG00000000487	PUS1	86	69.942	ENSORLG00000010787	pus1	83	69.942	Oryzias_latipes
ENSCHIG00000000487	PUS1	83	72.590	ENSORLG00020011483	pus1	83	70.520	Oryzias_latipes_hni
ENSCHIG00000000487	PUS1	86	70.520	ENSORLG00015023012	pus1	89	70.520	Oryzias_latipes_hsok
ENSCHIG00000000487	PUS1	86	69.942	ENSOMEG00000022655	pus1	81	69.942	Oryzias_melastigma
ENSCHIG00000000487	PUS1	96	86.684	ENSOGAG00000008720	PUS1	99	86.684	Otolemur_garnettii
ENSCHIG00000000487	PUS1	100	98.750	ENSOARG00000013316	PUS1	100	97.460	Ovis_aries
ENSCHIG00000000487	PUS1	100	83.500	ENSPPAG00000040971	PUS1	97	81.971	Pan_paniscus
ENSCHIG00000000487	PUS1	99	88.325	ENSPPRG00000015456	PUS1	100	88.325	Panthera_pardus
ENSCHIG00000000487	PUS1	86	91.254	ENSPTIG00000004201	PUS1	92	90.423	Panthera_tigris_altaica
ENSCHIG00000000487	PUS1	100	83.250	ENSPTRG00000005643	PUS1	97	81.731	Pan_troglodytes
ENSCHIG00000000487	PUS1	100	83.250	ENSPANG00000000376	PUS1	97	81.775	Papio_anubis
ENSCHIG00000000487	PUS1	85	70.674	ENSPKIG00000019369	pus1	78	70.674	Paramormyrops_kingsleyae
ENSCHIG00000000487	PUS1	94	75.132	ENSPSIG00000016432	PUS1	97	70.406	Pelodiscus_sinensis
ENSCHIG00000000487	PUS1	93	63.496	ENSPMGG00000004522	pus1	93	67.887	Periophthalmus_magnuspinnatus
ENSCHIG00000000487	PUS1	100	82.750	ENSPEMG00000013448	Pus1	98	81.687	Peromyscus_maniculatus_bairdii
ENSCHIG00000000487	PUS1	82	59.756	ENSPMAG00000004636	pus1	99	59.756	Petromyzon_marinus
ENSCHIG00000000487	PUS1	63	81.349	ENSPCIG00000022609	-	66	77.338	Phascolarctos_cinereus
ENSCHIG00000000487	PUS1	93	65.160	ENSPFOG00000019669	pus1	90	65.160	Poecilia_formosa
ENSCHIG00000000487	PUS1	93	65.160	ENSPLAG00000007185	pus1	90	65.160	Poecilia_latipinna
ENSCHIG00000000487	PUS1	93	65.160	ENSPLAG00000002692	-	90	65.160	Poecilia_latipinna
ENSCHIG00000000487	PUS1	93	65.160	ENSPMEG00000011115	PUS1	92	64.644	Poecilia_mexicana
ENSCHIG00000000487	PUS1	93	65.160	ENSPMEG00000006038	pus1	91	66.213	Poecilia_mexicana
ENSCHIG00000000487	PUS1	91	66.213	ENSPREG00000007231	pus1	92	71.429	Poecilia_reticulata
ENSCHIG00000000487	PUS1	100	82.500	ENSPPYG00000005132	PUS1	97	81.598	Pongo_abelii
ENSCHIG00000000487	PUS1	65	78.626	ENSPCAG00000009110	-	64	78.626	Procavia_capensis
ENSCHIG00000000487	PUS1	100	75.750	ENSPCOG00000015595	PUS1	100	75.750	Propithecus_coquereli
ENSCHIG00000000487	PUS1	87	68.732	ENSPNYG00000013571	pus1	89	65.354	Pundamilia_nyererei
ENSCHIG00000000487	PUS1	86	70.930	ENSPNAG00000003938	pus1	82	70.930	Pygocentrus_nattereri
ENSCHIG00000000487	PUS1	100	82.250	ENSRNOG00000037500	Pus1	98	81.205	Rattus_norvegicus
ENSCHIG00000000487	PUS1	100	83.000	ENSRBIG00000043177	PUS1	100	83.000	Rhinopithecus_bieti
ENSCHIG00000000487	PUS1	100	82.500	ENSRROG00000039744	PUS1	97	81.055	Rhinopithecus_roxellana
ENSCHIG00000000487	PUS1	77	42.963	YPL212C	-	56	43.939	Saccharomyces_cerevisiae
ENSCHIG00000000487	PUS1	100	83.750	ENSSBOG00000023593	PUS1	100	83.750	Saimiri_boliviensis_boliviensis
ENSCHIG00000000487	PUS1	97	76.923	ENSSHAG00000013193	PUS1	98	73.775	Sarcophilus_harrisii
ENSCHIG00000000487	PUS1	86	73.333	ENSSFOG00015003463	pus1	82	71.038	Scleropages_formosus
ENSCHIG00000000487	PUS1	85	70.175	ENSSMAG00000019075	pus1	82	69.855	Scophthalmus_maximus
ENSCHIG00000000487	PUS1	91	66.845	ENSSDUG00000007102	pus1	93	64.232	Seriola_dumerili
ENSCHIG00000000487	PUS1	91	66.310	ENSSLDG00000022850	pus1	93	63.728	Seriola_lalandi_dorsalis
ENSCHIG00000000487	PUS1	77	78.502	ENSSARG00000008367	PUS1	99	78.502	Sorex_araneus
ENSCHIG00000000487	PUS1	92	76.965	ENSSPUG00000010009	PUS1	97	73.418	Sphenodon_punctatus
ENSCHIG00000000487	PUS1	86	69.565	ENSSPAG00000006272	pus1	90	67.590	Stegastes_partitus
ENSCHIG00000000487	PUS1	100	93.250	ENSSSCG00000009741	PUS1	100	93.250	Sus_scrofa
ENSCHIG00000000487	PUS1	82	82.012	ENSTGUG00000008068	PUS1	99	82.012	Taeniopygia_guttata
ENSCHIG00000000487	PUS1	92	66.577	ENSTRUG00000002198	pus1	98	64.031	Takifugu_rubripes
ENSCHIG00000000487	PUS1	91	66.216	ENSTNIG00000003942	pus1	94	66.216	Tetraodon_nigroviridis
ENSCHIG00000000487	PUS1	100	91.750	ENSTTRG00000000632	PUS1	98	91.346	Tursiops_truncatus
ENSCHIG00000000487	PUS1	99	89.086	ENSUAMG00000017197	PUS1	100	89.086	Ursus_americanus
ENSCHIG00000000487	PUS1	90	91.365	ENSUMAG00000002831	PUS1	100	91.867	Ursus_maritimus
ENSCHIG00000000487	PUS1	96	87.273	ENSVVUG00000004199	PUS1	91	85.101	Vulpes_vulpes
ENSCHIG00000000487	PUS1	80	49.221	ENSXETG00000033640	-	100	49.221	Xenopus_tropicalis
ENSCHIG00000000487	PUS1	92	70.461	ENSXETG00000002030	pus1	92	70.461	Xenopus_tropicalis
ENSCHIG00000000487	PUS1	96	64.156	ENSXCOG00000004722	pus1	96	66.486	Xiphophorus_couchianus
ENSCHIG00000000487	PUS1	99	62.750	ENSXMAG00000000988	pus1	95	62.750	Xiphophorus_maculatus