EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000000499 (Gene tree)
Gene ID: 102174754
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 58453 bases
Position: chr13:27595563-27654015
Accession: 102174754
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000000713	PRP4	PF08799.11	1.2e-13	1	1
ENSCHIP00000000711	PRP4	PF08799.11	1.2e-13	1	1
ENSCHIP00000000713	Prp18	PF02840.15	5.6e-63	1	1
ENSCHIP00000000711	Prp18	PF02840.15	6.7e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000000739	-	1291	XM_005687955	ENSCHIP00000000711	351 (aa)	XP_005688012	UPI000383E9FC
ENSCHIT00000000741	-	1264	XM_005687956	ENSCHIP00000000713	342 (aa)	XP_005688013	UPI000069AA24

Gene Model

Click here to download ENSCHIG00000000499's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000000499's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000000499	-	100	99.123	ENSG00000165630	PRPF18	100	99.123	Homo_sapiens
ENSCHIG00000000499	-	100	84.795	ENSAPOG00000024177	prpf18	100	84.795	Acanthochromis_polyacanthus
ENSCHIG00000000499	-	100	99.708	ENSAMEG00000013591	-	100	99.708	Ailuropoda_melanoleuca
ENSCHIG00000000499	-	100	84.211	ENSACIG00000001186	prpf18	100	84.211	Amphilophus_citrinellus
ENSCHIG00000000499	-	98	84.776	ENSAOCG00000006572	prpf18	94	83.090	Amphiprion_ocellaris
ENSCHIG00000000499	-	100	85.088	ENSAPEG00000004564	prpf18	100	85.088	Amphiprion_percula
ENSCHIG00000000499	-	100	83.626	ENSATEG00000000303	prpf18	100	83.626	Anabas_testudineus
ENSCHIG00000000499	-	99	90.882	ENSAPLG00000003387	-	99	90.882	Anas_platyrhynchos
ENSCHIG00000000499	-	100	90.988	ENSACAG00000000818	-	100	90.988	Anolis_carolinensis
ENSCHIG00000000499	-	100	98.575	ENSANAG00000037445	-	100	98.575	Aotus_nancymaae
ENSCHIG00000000499	-	100	84.211	ENSACLG00000026296	prpf18	100	84.211	Astatotilapia_calliptera
ENSCHIG00000000499	-	100	83.714	ENSAMXG00000012848	prpf18	100	83.714	Astyanax_mexicanus
ENSCHIG00000000499	-	100	100.000	ENSBTAG00000017244	PRPF18	100	100.000	Bos_taurus
ENSCHIG00000000499	-	98	38.506	WBGene00009320	F32B6.3	97	38.506	Caenorhabditis_elegans
ENSCHIG00000000499	-	100	98.575	ENSCJAG00000009432	-	100	98.575	Callithrix_jacchus
ENSCHIG00000000499	-	100	99.708	ENSCAFG00000004735	-	100	99.708	Canis_familiaris
ENSCHIG00000000499	-	100	99.708	ENSCAFG00020007712	-	100	99.708	Canis_lupus_dingo
ENSCHIG00000000499	-	100	98.291	ENSTSYG00000003517	-	100	98.291	Carlito_syrichta
ENSCHIG00000000499	-	100	99.123	ENSCPOG00000021069	-	100	99.123	Cavia_porcellus
ENSCHIG00000000499	-	100	98.575	ENSCCAG00000036822	-	100	98.575	Cebus_capucinus
ENSCHIG00000000499	-	100	88.012	ENSCATG00000016633	-	100	88.012	Cercocebus_atys
ENSCHIG00000000499	-	100	98.830	ENSCLAG00000011770	-	100	98.830	Chinchilla_lanigera
ENSCHIG00000000499	-	100	99.145	ENSCSAG00000013109	-	100	99.145	Chlorocebus_sabaeus
ENSCHIG00000000499	-	100	89.045	ENSCPBG00000003100	-	100	89.045	Chrysemys_picta_bellii
ENSCHIG00000000499	-	99	54.412	ENSCING00000020481	-	97	54.412	Ciona_intestinalis
ENSCHIG00000000499	-	99	54.335	ENSCSAVG00000010546	-	99	54.360	Ciona_savignyi
ENSCHIG00000000499	-	100	98.860	ENSCANG00000034900	-	100	98.860	Colobus_angolensis_palliatus
ENSCHIG00000000499	-	100	98.538	ENSCGRG00001023665	Prpf18	100	98.538	Cricetulus_griseus_chok1gshd
ENSCHIG00000000499	-	100	98.538	ENSCGRG00000014690	Prpf18	100	98.538	Cricetulus_griseus_crigri
ENSCHIG00000000499	-	100	82.749	ENSCSEG00000005536	prpf18	99	82.749	Cynoglossus_semilaevis
ENSCHIG00000000499	-	100	83.918	ENSCVAG00000012401	prpf18	100	83.918	Cyprinodon_variegatus
ENSCHIG00000000499	-	100	84.211	ENSDARG00000058306	prpf18	100	84.211	Danio_rerio
ENSCHIG00000000499	-	100	98.538	ENSDNOG00000035607	-	100	98.538	Dasypus_novemcinctus
ENSCHIG00000000499	-	100	98.830	ENSDORG00000000858	Prpf18	100	98.830	Dipodomys_ordii
ENSCHIG00000000499	-	99	51.327	FBgn0027784	Prp18	98	51.032	Drosophila_melanogaster
ENSCHIG00000000499	-	100	86.842	ENSETEG00000015060	-	100	86.842	Echinops_telfairi
ENSCHIG00000000499	-	100	66.954	ENSEBUG00000016502	prpf18	99	66.092	Eptatretus_burgeri
ENSCHIG00000000499	-	100	99.430	ENSEASG00005019373	-	100	99.430	Equus_asinus_asinus
ENSCHIG00000000499	-	100	99.430	ENSECAG00000006997	PRPF18	100	99.430	Equus_caballus
ENSCHIG00000000499	-	92	63.291	ENSEEUG00000001171	-	100	63.291	Erinaceus_europaeus
ENSCHIG00000000499	-	100	81.924	ENSELUG00000022190	prpf18	100	81.924	Esox_lucius
ENSCHIG00000000499	-	100	99.430	ENSFCAG00000004436	-	100	99.430	Felis_catus
ENSCHIG00000000499	-	93	90.462	ENSFALG00000001912	-	97	90.462	Ficedula_albicollis
ENSCHIG00000000499	-	99	64.638	ENSFDAG00000010713	-	97	64.638	Fukomys_damarensis
ENSCHIG00000000499	-	94	98.750	ENSFDAG00000014026	-	100	98.750	Fukomys_damarensis
ENSCHIG00000000499	-	80	89.011	ENSFHEG00000020125	prpf18	98	89.139	Fundulus_heteroclitus
ENSCHIG00000000499	-	99	79.765	ENSGMOG00000012210	prpf18	99	79.765	Gadus_morhua
ENSCHIG00000000499	-	100	91.520	ENSGALG00000043593	-	100	91.520	Gallus_gallus
ENSCHIG00000000499	-	100	82.456	ENSGAFG00000006034	prpf18	100	82.456	Gambusia_affinis
ENSCHIG00000000499	-	100	81.579	ENSGACG00000012232	prpf18	100	81.579	Gasterosteus_aculeatus
ENSCHIG00000000499	-	100	91.813	ENSGAGG00000016878	-	100	91.813	Gopherus_agassizii
ENSCHIG00000000499	-	93	99.077	ENSGGOG00000025188	-	96	99.077	Gorilla_gorilla
ENSCHIG00000000499	-	100	84.211	ENSHBUG00000010264	prpf18	100	84.211	Haplochromis_burtoni
ENSCHIG00000000499	-	100	99.123	ENSHGLG00000018534	PRPF18	100	99.123	Heterocephalus_glaber_female
ENSCHIG00000000499	-	94	99.062	ENSHGLG00100012161	-	98	99.062	Heterocephalus_glaber_male
ENSCHIG00000000499	-	100	83.626	ENSHCOG00000015987	prpf18	100	83.626	Hippocampus_comes
ENSCHIG00000000499	-	100	81.586	ENSIPUG00000007432	prpf18	100	82.436	Ictalurus_punctatus
ENSCHIG00000000499	-	100	97.368	ENSSTOG00000008735	-	100	97.368	Ictidomys_tridecemlineatus
ENSCHIG00000000499	-	100	72.046	ENSJJAG00000015191	-	100	72.046	Jaculus_jaculus
ENSCHIG00000000499	-	100	99.123	ENSJJAG00000024041	-	100	99.123	Jaculus_jaculus
ENSCHIG00000000499	-	100	82.749	ENSKMAG00000012124	prpf18	100	82.749	Kryptolebias_marmoratus
ENSCHIG00000000499	-	99	83.136	ENSLBEG00000028466	prpf18	99	83.136	Labrus_bergylta
ENSCHIG00000000499	-	100	85.965	ENSLACG00000009885	prpf18	100	85.965	Latimeria_chalumnae
ENSCHIG00000000499	-	100	89.766	ENSLOCG00000016736	prpf18	100	89.766	Lepisosteus_oculatus
ENSCHIG00000000499	-	100	99.123	ENSLAFG00000007753	-	100	99.123	Loxodonta_africana
ENSCHIG00000000499	-	100	99.145	ENSMFAG00000000540	-	100	99.145	Macaca_fascicularis
ENSCHIG00000000499	-	100	99.145	ENSMMUG00000015071	PRPF18	100	99.145	Macaca_mulatta
ENSCHIG00000000499	-	100	99.145	ENSMNEG00000024679	-	100	99.145	Macaca_nemestrina
ENSCHIG00000000499	-	100	83.918	ENSMLEG00000031715	-	100	83.918	Mandrillus_leucophaeus
ENSCHIG00000000499	-	100	83.041	ENSMAMG00000006610	prpf18	100	83.041	Mastacembelus_armatus
ENSCHIG00000000499	-	100	84.211	ENSMZEG00005019392	prpf18	100	84.211	Maylandia_zebra
ENSCHIG00000000499	-	100	91.520	ENSMGAG00000005023	-	100	91.520	Meleagris_gallopavo
ENSCHIG00000000499	-	100	98.860	ENSMICG00000006572	-	100	98.860	Microcebus_murinus
ENSCHIG00000000499	-	100	99.123	ENSMOCG00000021468	Prpf18	100	99.123	Microtus_ochrogaster
ENSCHIG00000000499	-	100	82.749	ENSMMOG00000013012	prpf18	100	82.749	Mola_mola
ENSCHIG00000000499	-	96	92.308	ENSMODG00000016902	-	92	92.308	Monodelphis_domestica
ENSCHIG00000000499	-	100	85.380	ENSMODG00000024043	-	100	85.380	Monodelphis_domestica
ENSCHIG00000000499	-	100	77.714	ENSMALG00000005486	prpf18	100	78.000	Monopterus_albus
ENSCHIG00000000499	-	100	98.538	MGP_CAROLIEiJ_G0023143	Prpf18	100	98.630	Mus_caroli
ENSCHIG00000000499	-	100	98.246	ENSMUSG00000039449	Prpf18	100	98.630	Mus_musculus
ENSCHIG00000000499	-	100	98.830	MGP_PahariEiJ_G0019203	Prpf18	100	98.830	Mus_pahari
ENSCHIG00000000499	-	100	97.953	MGP_SPRETEiJ_G0024061	Prpf18	100	98.630	Mus_spretus
ENSCHIG00000000499	-	100	99.415	ENSMPUG00000000938	-	100	99.415	Mustela_putorius_furo
ENSCHIG00000000499	-	100	98.830	ENSMLUG00000009200	-	100	98.830	Myotis_lucifugus
ENSCHIG00000000499	-	100	98.538	ENSNGAG00000012500	-	100	98.538	Nannospalax_galili
ENSCHIG00000000499	-	67	91.739	ENSNGAG00000023550	-	82	91.739	Nannospalax_galili
ENSCHIG00000000499	-	100	84.211	ENSNBRG00000001778	prpf18	100	84.211	Neolamprologus_brichardi
ENSCHIG00000000499	-	100	99.145	ENSNLEG00000012186	-	100	99.145	Nomascus_leucogenys
ENSCHIG00000000499	-	76	79.537	ENSMEUG00000005032	-	100	64.912	Notamacropus_eugenii
ENSCHIG00000000499	-	77	80.377	ENSOPRG00000002153	-	100	80.377	Ochotona_princeps
ENSCHIG00000000499	-	100	98.246	ENSODEG00000003770	-	100	98.246	Octodon_degus
ENSCHIG00000000499	-	98	83.582	ENSONIG00000014854	prpf18	96	83.582	Oreochromis_niloticus
ENSCHIG00000000499	-	100	94.444	ENSOANG00000015404	-	100	94.444	Ornithorhynchus_anatinus
ENSCHIG00000000499	-	100	99.415	ENSOCUG00000027756	-	100	94.737	Oryctolagus_cuniculus
ENSCHIG00000000499	-	100	82.336	ENSORLG00000010293	prpf18	100	82.336	Oryzias_latipes
ENSCHIG00000000499	-	100	83.918	ENSORLG00020001530	prpf18	100	83.918	Oryzias_latipes_hni
ENSCHIG00000000499	-	100	84.211	ENSORLG00015013705	prpf18	100	84.211	Oryzias_latipes_hsok
ENSCHIG00000000499	-	100	84.795	ENSOMEG00000009167	prpf18	100	84.795	Oryzias_melastigma
ENSCHIG00000000499	-	100	98.538	ENSOGAG00000007294	-	100	98.538	Otolemur_garnettii
ENSCHIG00000000499	-	100	100.000	ENSOARG00000006243	-	100	100.000	Ovis_aries
ENSCHIG00000000499	-	100	99.145	ENSPPAG00000041959	-	100	99.145	Pan_paniscus
ENSCHIG00000000499	-	100	99.415	ENSPPRG00000000107	-	100	99.415	Panthera_pardus
ENSCHIG00000000499	-	100	99.123	ENSPTIG00000021094	-	100	99.123	Panthera_tigris_altaica
ENSCHIG00000000499	-	100	99.145	ENSPTRG00000002306	PRPF18	100	99.145	Pan_troglodytes
ENSCHIG00000000499	-	100	98.860	ENSPANG00000023346	-	100	98.860	Papio_anubis
ENSCHIG00000000499	-	86	98.113	ENSPKIG00000014128	prpf18	96	82.336	Paramormyrops_kingsleyae
ENSCHIG00000000499	-	100	92.105	ENSPSIG00000016064	-	100	92.105	Pelodiscus_sinensis
ENSCHIG00000000499	-	100	78.363	ENSPMGG00000016486	prpf18	100	78.363	Periophthalmus_magnuspinnatus
ENSCHIG00000000499	-	100	98.830	ENSPEMG00000013704	Prpf18	100	98.830	Peromyscus_maniculatus_bairdii
ENSCHIG00000000499	-	100	74.566	ENSPMAG00000000204	prpf18	100	74.566	Petromyzon_marinus
ENSCHIG00000000499	-	93	95.692	ENSPCIG00000012963	-	99	95.886	Phascolarctos_cinereus
ENSCHIG00000000499	-	100	81.481	ENSPFOG00000017611	prpf18	100	81.481	Poecilia_formosa
ENSCHIG00000000499	-	100	83.041	ENSPLAG00000000369	prpf18	100	83.041	Poecilia_latipinna
ENSCHIG00000000499	-	100	83.041	ENSPMEG00000005183	prpf18	100	83.041	Poecilia_mexicana
ENSCHIG00000000499	-	100	82.164	ENSPREG00000015232	prpf18	100	82.164	Poecilia_reticulata
ENSCHIG00000000499	-	100	98.830	ENSPPYG00000002101	PRPF18	100	98.830	Pongo_abelii
ENSCHIG00000000499	-	100	80.117	ENSPCAG00000010833	-	100	80.117	Procavia_capensis
ENSCHIG00000000499	-	100	91.520	ENSPCOG00000013057	-	100	91.520	Propithecus_coquereli
ENSCHIG00000000499	-	100	61.696	ENSPVAG00000002947	-	100	61.696	Pteropus_vampyrus
ENSCHIG00000000499	-	100	84.211	ENSPNYG00000003554	prpf18	100	84.211	Pundamilia_nyererei
ENSCHIG00000000499	-	100	84.615	ENSPNAG00000023151	prpf18	100	84.615	Pygocentrus_nattereri
ENSCHIG00000000499	-	100	97.953	ENSRNOG00000018396	Prpf18	100	97.953	Rattus_norvegicus
ENSCHIG00000000499	-	100	98.575	ENSRBIG00000028028	-	100	98.575	Rhinopithecus_bieti
ENSCHIG00000000499	-	100	98.860	ENSRROG00000040695	-	100	98.860	Rhinopithecus_roxellana
ENSCHIG00000000499	-	100	98.575	ENSSBOG00000034482	-	100	98.575	Saimiri_boliviensis_boliviensis
ENSCHIG00000000499	-	100	95.906	ENSSHAG00000016463	-	100	95.906	Sarcophilus_harrisii
ENSCHIG00000000499	-	100	76.901	ENSSHAG00000009669	-	100	76.901	Sarcophilus_harrisii
ENSCHIG00000000499	-	77	44.528	ENSSFOG00015021154	-	89	48.927	Scleropages_formosus
ENSCHIG00000000499	-	98	82.899	ENSSFOG00015022118	prpf18	100	76.945	Scleropages_formosus
ENSCHIG00000000499	-	100	82.456	ENSSMAG00000005308	prpf18	100	82.456	Scophthalmus_maximus
ENSCHIG00000000499	-	100	84.503	ENSSDUG00000015428	prpf18	100	84.503	Seriola_dumerili
ENSCHIG00000000499	-	100	84.503	ENSSLDG00000023989	prpf18	100	84.503	Seriola_lalandi_dorsalis
ENSCHIG00000000499	-	100	69.006	ENSSARG00000005307	-	100	69.006	Sorex_araneus
ENSCHIG00000000499	-	100	91.813	ENSSPUG00000002619	-	100	91.813	Sphenodon_punctatus
ENSCHIG00000000499	-	100	83.918	ENSSPAG00000019502	prpf18	100	83.918	Stegastes_partitus
ENSCHIG00000000499	-	100	99.715	ENSSSCG00000026354	-	100	99.715	Sus_scrofa
ENSCHIG00000000499	-	100	91.520	ENSTGUG00000002286	-	100	91.520	Taeniopygia_guttata
ENSCHIG00000000499	-	100	81.579	ENSTRUG00000011278	prpf18	100	81.579	Takifugu_rubripes
ENSCHIG00000000499	-	100	81.287	ENSTNIG00000000911	prpf18	100	81.287	Tetraodon_nigroviridis
ENSCHIG00000000499	-	80	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSCHIG00000000499	-	100	98.830	ENSTTRG00000011117	PRPF18	100	98.830	Tursiops_truncatus
ENSCHIG00000000499	-	95	96.308	ENSUAMG00000001815	-	94	96.308	Ursus_americanus
ENSCHIG00000000499	-	100	94.737	ENSUMAG00000012329	-	100	94.737	Ursus_maritimus
ENSCHIG00000000499	-	100	93.567	ENSVPAG00000011486	-	100	93.567	Vicugna_pacos
ENSCHIG00000000499	-	100	99.715	ENSVVUG00000005453	-	100	99.715	Vulpes_vulpes
ENSCHIG00000000499	-	100	80.580	ENSXETG00000024057	prpf18	100	80.580	Xenopus_tropicalis
ENSCHIG00000000499	-	100	82.267	ENSXCOG00000020414	prpf18	100	82.267	Xiphophorus_couchianus
ENSCHIG00000000499	-	100	82.749	ENSXMAG00000004713	prpf18	91	82.749	Xiphophorus_maculatus