EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000000591 (Gene tree)
Gene ID: 102168340
Gene Symbol: -
Alias: -
Full Name: RAB%2C member of RAS oncogene family like 2B
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 19401 bases
Position: chr5:118989084-119008484
Accession: 102168340
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000000800	MMR_HSR1	PF01926.23	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000001102	-	4234	XM_018049005	ENSCHIP00000000800	231 (aa)	XP_017904494	UPI0008471EE1
ENSCHIT00000001195	-	771	-	ENSCHIP00000000817	256 (aa)	-	UPI000D192C5E

Gene Model

Click here to download ENSCHIG00000000591's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000000591's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000000591	-	67	33.540	ENSCHIG00000017305	RAB22A	93	33.974
ENSCHIG00000000591	-	52	31.111	ENSCHIG00000017365	RABL3	55	31.111
ENSCHIG00000000591	-	67	30.380	ENSCHIG00000009815	RAB23	67	30.380
ENSCHIG00000000591	-	65	34.641	ENSCHIG00000020374	RAB2A	72	34.641
ENSCHIG00000000591	-	65	32.680	ENSCHIG00000017531	-	74	32.026
ENSCHIG00000000591	-	67	30.380	ENSCHIG00000018911	RAB25	74	30.380
ENSCHIG00000000591	-	61	35.811	ENSCHIG00000020393	RAB33B	64	35.811
ENSCHIG00000000591	-	67	31.646	ENSCHIG00000022271	-	78	31.646
ENSCHIG00000000591	-	62	32.000	ENSCHIG00000025837	MRAS	77	32.919
ENSCHIG00000000591	-	68	35.329	ENSCHIG00000001138	RAB7A	80	34.132
ENSCHIG00000000591	-	67	35.220	ENSCHIG00000016103	RAB12	67	34.756
ENSCHIG00000000591	-	73	34.078	ENSCHIG00000002776	RAB9B	88	34.078
ENSCHIG00000000591	-	63	38.255	ENSCHIG00000008749	RAB18	70	38.889
ENSCHIG00000000591	-	67	30.818	ENSCHIG00000000146	RAB31	82	30.818
ENSCHIG00000000591	-	73	35.632	ENSCHIG00000020601	RAB30	86	35.632
ENSCHIG00000000591	-	74	33.696	ENSCHIG00000001895	RAB9A	84	34.286
ENSCHIG00000000591	-	65	36.842	ENSCHIG00000015549	RAB1B	76	36.842
ENSCHIG00000000591	-	65	35.948	ENSCHIG00000025419	-	71	35.948
ENSCHIG00000000591	-	65	32.000	ENSCHIG00000025632	-	66	32.000
ENSCHIG00000000591	-	67	31.875	ENSCHIG00000000158	RAB39B	75	31.875
ENSCHIG00000000591	-	68	30.435	ENSCHIG00000025288	RAB15	76	30.435
ENSCHIG00000000591	-	65	32.026	ENSCHIG00000016452	RAB6B	74	32.026
ENSCHIG00000000591	-	65	37.662	ENSCHIG00000012183	-	71	37.662
ENSCHIG00000000591	-	70	37.126	ENSCHIG00000010333	RAB5B	77	37.126
ENSCHIG00000000591	-	65	36.601	ENSCHIG00000012960	RAB5C	71	36.601
ENSCHIG00000000591	-	66	36.076	ENSCHIG00000022426	-	70	36.076
ENSCHIG00000000591	-	90	32.864	ENSCHIG00000026983	RAB14	77	35.503
ENSCHIG00000000591	-	65	35.948	ENSCHIG00000014060	RAB1A	75	35.948

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000000591	-	99	84.716	ENSG00000079974	RABL2B	100	92.929	Homo_sapiens
ENSCHIG00000000591	-	99	84.716	ENSG00000144134	RABL2A	100	92.982	Homo_sapiens
ENSCHIG00000000591	-	92	75.587	ENSAPOG00000023708	rabl2	91	78.325	Acanthochromis_polyacanthus
ENSCHIG00000000591	-	100	84.255	ENSAMEG00000003173	-	100	83.830	Ailuropoda_melanoleuca
ENSCHIG00000000591	-	92	73.113	ENSACIG00000000670	rabl2	91	74.877	Amphilophus_citrinellus
ENSCHIG00000000591	-	92	76.056	ENSAOCG00000008069	rabl2	91	78.818	Amphiprion_ocellaris
ENSCHIG00000000591	-	92	75.587	ENSAPEG00000003164	rabl2	91	78.325	Amphiprion_percula
ENSCHIG00000000591	-	94	75.113	ENSATEG00000001111	rabl2	91	78.818	Anabas_testudineus
ENSCHIG00000000591	-	71	85.366	ENSACAG00000000418	-	93	85.366	Anolis_carolinensis
ENSCHIG00000000591	-	97	82.456	ENSANAG00000021001	-	97	81.659	Aotus_nancymaae
ENSCHIG00000000591	-	92	75.472	ENSACLG00000025632	rabl2	91	77.340	Astatotilapia_calliptera
ENSCHIG00000000591	-	93	76.168	ENSAMXG00000040611	rabl2	91	78.713	Astyanax_mexicanus
ENSCHIG00000000591	-	100	94.372	ENSBTAG00000004876	RABL2B	100	94.372	Bos_taurus
ENSCHIG00000000591	-	99	82.969	ENSCJAG00000018414	-	97	82.533	Callithrix_jacchus
ENSCHIG00000000591	-	100	85.714	ENSCAFG00020006938	-	100	85.281	Canis_lupus_dingo
ENSCHIG00000000591	-	97	83.857	ENSTSYG00000004323	-	94	83.408	Carlito_syrichta
ENSCHIG00000000591	-	97	83.857	ENSCPOG00000026899	-	97	83.408	Cavia_porcellus
ENSCHIG00000000591	-	99	83.843	ENSCCAG00000025944	-	97	83.406	Cebus_capucinus
ENSCHIG00000000591	-	99	82.533	ENSCATG00000034307	-	97	82.096	Cercocebus_atys
ENSCHIG00000000591	-	98	84.141	ENSCLAG00000017218	-	98	84.141	Chinchilla_lanigera
ENSCHIG00000000591	-	100	83.550	ENSCSAG00000004698	-	97	83.117	Chlorocebus_sabaeus
ENSCHIG00000000591	-	92	80.000	ENSCPBG00000011715	-	92	82.039	Chrysemys_picta_bellii
ENSCHIG00000000591	-	78	66.667	ENSCING00000004961	-	84	66.667	Ciona_intestinalis
ENSCHIG00000000591	-	77	68.362	ENSCSAVG00000006042	-	86	67.598	Ciona_savignyi
ENSCHIG00000000591	-	99	82.096	ENSCANG00000030879	-	97	81.659	Colobus_angolensis_palliatus
ENSCHIG00000000591	-	100	84.416	ENSCGRG00001021894	Rabl2	100	83.983	Cricetulus_griseus_chok1gshd
ENSCHIG00000000591	-	88	76.355	ENSCSEG00000005479	rabl2	91	76.355	Cynoglossus_semilaevis
ENSCHIG00000000591	-	90	75.829	ENSCVAG00000011432	rabl2	88	80.208	Cyprinodon_variegatus
ENSCHIG00000000591	-	93	74.419	ENSDARG00000063321	rabl2	98	74.419	Danio_rerio
ENSCHIG00000000591	-	99	84.783	ENSDNOG00000035151	-	99	84.348	Dasypus_novemcinctus
ENSCHIG00000000591	-	100	83.550	ENSDORG00000000003	Rabl2	100	83.117	Dipodomys_ordii
ENSCHIG00000000591	-	100	85.714	ENSEASG00005008239	-	100	85.281	Equus_asinus_asinus
ENSCHIG00000000591	-	100	85.714	ENSECAG00000026942	-	100	85.281	Equus_caballus
ENSCHIG00000000591	-	100	86.580	ENSFCAG00000033642	-	100	86.147	Felis_catus
ENSCHIG00000000591	-	100	83.550	ENSFDAG00000002113	-	100	83.117	Fukomys_damarensis
ENSCHIG00000000591	-	97	73.543	ENSFHEG00000015015	rabl2	84	73.543	Fundulus_heteroclitus
ENSCHIG00000000591	-	85	76.142	ENSGMOG00000018928	rabl2	100	76.142	Gadus_morhua
ENSCHIG00000000591	-	89	78.155	ENSGALG00000032458	RABL2B	83	83.871	Gallus_gallus
ENSCHIG00000000591	-	83	80.208	ENSGAFG00000005188	rabl2	87	79.793	Gambusia_affinis
ENSCHIG00000000591	-	92	73.709	ENSGACG00000012474	rabl2	92	75.862	Gasterosteus_aculeatus
ENSCHIG00000000591	-	92	75.472	ENSHBUG00000010964	rabl2	91	77.340	Haplochromis_burtoni
ENSCHIG00000000591	-	100	83.550	ENSHGLG00000005750	-	100	83.117	Heterocephalus_glaber_female
ENSCHIG00000000591	-	100	83.550	ENSHGLG00100016281	-	100	83.117	Heterocephalus_glaber_male
ENSCHIG00000000591	-	100	83.983	ENSSTOG00000002723	-	100	83.550	Ictidomys_tridecemlineatus
ENSCHIG00000000591	-	100	82.251	ENSJJAG00000010792	Rabl2	100	81.818	Jaculus_jaculus
ENSCHIG00000000591	-	92	75.587	ENSKMAG00000012723	rabl2	91	77.340	Kryptolebias_marmoratus
ENSCHIG00000000591	-	90	77.512	ENSLBEG00000003644	rabl2	91	78.818	Labrus_bergylta
ENSCHIG00000000591	-	93	77.674	ENSLACG00000003722	rabl2	90	81.188	Latimeria_chalumnae
ENSCHIG00000000591	-	94	77.419	ENSLOCG00000016767	rabl2	90	82.266	Lepisosteus_oculatus
ENSCHIG00000000591	-	99	83.406	ENSMFAG00000044775	-	97	82.969	Macaca_fascicularis
ENSCHIG00000000591	-	99	83.406	ENSMMUG00000022914	RABL2B	97	82.969	Macaca_mulatta
ENSCHIG00000000591	-	99	82.969	ENSMNEG00000028460	-	96	82.533	Macaca_nemestrina
ENSCHIG00000000591	-	99	82.096	ENSMLEG00000032621	-	96	81.659	Mandrillus_leucophaeus
ENSCHIG00000000591	-	93	76.636	ENSMAMG00000008168	rabl2	91	78.818	Mastacembelus_armatus
ENSCHIG00000000591	-	94	73.394	ENSMZEG00005019758	rabl2	91	78.173	Maylandia_zebra
ENSCHIG00000000591	-	99	82.609	ENSMAUG00000010955	Rabl2	100	82.609	Mesocricetus_auratus
ENSCHIG00000000591	-	99	86.026	ENSMICG00000031301	-	97	85.590	Microcebus_murinus
ENSCHIG00000000591	-	99	82.609	ENSMOCG00000002775	Rabl2	99	82.174	Microtus_ochrogaster
ENSCHIG00000000591	-	84	89.744	ENSMODG00000010838	-	89	90.206	Monodelphis_domestica
ENSCHIG00000000591	-	93	75.234	ENSMALG00000005944	rabl2	91	77.340	Monopterus_albus
ENSCHIG00000000591	-	100	80.952	MGP_CAROLIEiJ_G0020176	Rabl2	99	80.519	Mus_caroli
ENSCHIG00000000591	-	100	80.087	ENSMUSG00000022621	Rabl2	100	79.654	Mus_musculus
ENSCHIG00000000591	-	100	80.952	MGP_PahariEiJ_G0020181	Rabl2	100	80.519	Mus_pahari
ENSCHIG00000000591	-	100	80.087	MGP_SPRETEiJ_G0021073	Rabl2	100	79.654	Mus_spretus
ENSCHIG00000000591	-	100	86.580	ENSMPUG00000001806	-	100	86.147	Mustela_putorius_furo
ENSCHIG00000000591	-	99	81.739	ENSNGAG00000012843	Rabl2	96	81.304	Nannospalax_galili
ENSCHIG00000000591	-	92	75.472	ENSNBRG00000000489	rabl2	91	77.340	Neolamprologus_brichardi
ENSCHIG00000000591	-	99	82.969	ENSNLEG00000030435	-	96	82.533	Nomascus_leucogenys
ENSCHIG00000000591	-	97	83.857	ENSODEG00000015650	-	96	83.408	Octodon_degus
ENSCHIG00000000591	-	95	73.214	ENSONIG00000014885	rabl2	91	77.833	Oreochromis_niloticus
ENSCHIG00000000591	-	91	73.934	ENSORLG00000009874	rabl2	90	75.369	Oryzias_latipes
ENSCHIG00000000591	-	91	73.934	ENSORLG00020001721	rabl2	90	75.369	Oryzias_latipes_hni
ENSCHIG00000000591	-	91	73.934	ENSORLG00015014268	rabl2	90	75.369	Oryzias_latipes_hsok
ENSCHIG00000000591	-	91	75.355	ENSOMEG00000008576	rabl2	93	77.228	Oryzias_melastigma
ENSCHIG00000000591	-	99	86.026	ENSOGAG00000009123	-	97	85.590	Otolemur_garnettii
ENSCHIG00000000591	-	97	87.111	ENSPPRG00000014642	-	95	86.667	Panthera_pardus
ENSCHIG00000000591	-	100	86.580	ENSPTIG00000018747	-	100	86.147	Panthera_tigris_altaica
ENSCHIG00000000591	-	99	80.335	ENSPTRG00000014555	-	89	85.915	Pan_troglodytes
ENSCHIG00000000591	-	99	79.412	ENSPANG00000036121	-	96	78.992	Papio_anubis
ENSCHIG00000000591	-	91	77.619	ENSPKIG00000025372	rabl2	89	80.500	Paramormyrops_kingsleyae
ENSCHIG00000000591	-	90	81.905	ENSPSIG00000014041	-	92	83.010	Pelodiscus_sinensis
ENSCHIG00000000591	-	85	78.173	ENSPMGG00000012946	rabl2	96	78.173	Periophthalmus_magnuspinnatus
ENSCHIG00000000591	-	100	82.684	ENSPEMG00000024045	Rabl2	100	82.251	Peromyscus_maniculatus_bairdii
ENSCHIG00000000591	-	84	88.718	ENSPCIG00000012436	-	80	89.175	Phascolarctos_cinereus
ENSCHIG00000000591	-	90	76.303	ENSPFOG00000017960	rabl2	88	79.082	Poecilia_formosa
ENSCHIG00000000591	-	90	77.033	ENSPLAG00000015685	rabl2	88	79.897	Poecilia_latipinna
ENSCHIG00000000591	-	90	77.033	ENSPMEG00000004703	rabl2	88	79.897	Poecilia_mexicana
ENSCHIG00000000591	-	84	78.866	ENSPREG00000014761	rabl2	96	78.866	Poecilia_reticulata
ENSCHIG00000000591	-	99	83.406	ENSPPYG00000012000	-	97	82.969	Pongo_abelii
ENSCHIG00000000591	-	99	86.463	ENSPCOG00000024865	-	97	86.026	Propithecus_coquereli
ENSCHIG00000000591	-	99	82.158	ENSPVAG00000004539	-	98	81.743	Pteropus_vampyrus
ENSCHIG00000000591	-	92	75.472	ENSPNYG00000004845	rabl2	91	77.340	Pundamilia_nyererei
ENSCHIG00000000591	-	87	79.104	ENSPNAG00000024254	rabl2	91	78.713	Pygocentrus_nattereri
ENSCHIG00000000591	-	100	81.818	ENSRNOG00000013947	Rabl2	89	81.385	Rattus_norvegicus
ENSCHIG00000000591	-	99	83.406	ENSRBIG00000033607	-	97	82.969	Rhinopithecus_bieti
ENSCHIG00000000591	-	99	83.406	ENSRROG00000031130	-	97	82.969	Rhinopithecus_roxellana
ENSCHIG00000000591	-	97	84.649	ENSSBOG00000033266	-	97	83.406	Saimiri_boliviensis_boliviensis
ENSCHIG00000000591	-	87	79.104	ENSSFOG00015020738	rabl2	90	79.104	Scleropages_formosus
ENSCHIG00000000591	-	92	75.587	ENSSMAG00000004606	rabl2	91	77.833	Scophthalmus_maximus
ENSCHIG00000000591	-	92	75.117	ENSSDUG00000014765	rabl2	91	77.340	Seriola_dumerili
ENSCHIG00000000591	-	74	94.118	ENSSSCG00000025041	-	100	94.118	Sus_scrofa
ENSCHIG00000000591	-	87	76.355	ENSTGUG00000016028	-	89	81.622	Taeniopygia_guttata
ENSCHIG00000000591	-	92	76.056	ENSTRUG00000012454	rabl2	91	77.833	Takifugu_rubripes
ENSCHIG00000000591	-	92	75.587	ENSTNIG00000017951	rabl2	91	77.340	Tetraodon_nigroviridis
ENSCHIG00000000591	-	85	93.401	ENSUAMG00000015761	-	88	93.401	Ursus_americanus
ENSCHIG00000000591	-	100	86.580	ENSUMAG00000017116	-	100	86.147	Ursus_maritimus
ENSCHIG00000000591	-	100	85.281	ENSVVUG00000025761	-	100	84.848	Vulpes_vulpes
ENSCHIG00000000591	-	96	75.676	ENSXETG00000015712	rabl2b	99	75.676	Xenopus_tropicalis
ENSCHIG00000000591	-	84	80.000	ENSXMAG00000004569	rabl2	87	80.412	Xiphophorus_maculatus