EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000001019 (Gene tree)
Gene ID: 102182607
Gene Symbol: LIG4
Alias: -
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 2736 bases
Position: chr12:2693630-2696365
Accession: 102182607
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000000867	RNA_ligase	PF09414.10	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000001490	LIG4-201	2736	XM_005687741	ENSCHIP00000000867	911 (aa)	XP_005687798	UPI0008477D10

Gene Model

Click here to download ENSCHIG00000001019's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000001019's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000001019	LIG4	100	88.913	ENSG00000174405	LIG4	100	88.913	Homo_sapiens
ENSCHIG00000001019	LIG4	99	65.385	ENSAPOG00000000866	lig4	99	65.604	Acanthochromis_polyacanthus
ENSCHIG00000001019	LIG4	100	87.596	ENSAMEG00000019685	LIG4	99	87.596	Ailuropoda_melanoleuca
ENSCHIG00000001019	LIG4	99	65.604	ENSACIG00000018309	lig4	99	65.824	Amphilophus_citrinellus
ENSCHIG00000001019	LIG4	99	65.385	ENSAOCG00000011768	lig4	99	65.604	Amphiprion_ocellaris
ENSCHIG00000001019	LIG4	99	65.495	ENSAPEG00000017815	lig4	99	65.714	Amphiprion_percula
ENSCHIG00000001019	LIG4	99	64.505	ENSATEG00000005583	lig4	99	64.615	Anabas_testudineus
ENSCHIG00000001019	LIG4	97	74.263	ENSAPLG00000001673	LIG4	99	74.263	Anas_platyrhynchos
ENSCHIG00000001019	LIG4	99	73.976	ENSACAG00000014566	LIG4	99	73.976	Anolis_carolinensis
ENSCHIG00000001019	LIG4	100	87.816	ENSANAG00000012446	LIG4	100	87.816	Aotus_nancymaae
ENSCHIG00000001019	LIG4	99	65.275	ENSACLG00000027051	lig4	99	65.275	Astatotilapia_calliptera
ENSCHIG00000001019	LIG4	99	63.607	ENSAMXG00000008192	lig4	94	63.607	Astyanax_mexicanus
ENSCHIG00000001019	LIG4	100	97.036	ENSBTAG00000015868	LIG4	100	97.036	Bos_taurus
ENSCHIG00000001019	LIG4	100	87.157	ENSCJAG00000014689	LIG4	100	87.157	Callithrix_jacchus
ENSCHIG00000001019	LIG4	100	88.255	ENSCAFG00000006031	LIG4	100	88.255	Canis_familiaris
ENSCHIG00000001019	LIG4	100	88.255	ENSCAFG00020021230	LIG4	100	88.255	Canis_lupus_dingo
ENSCHIG00000001019	LIG4	99	86.600	ENSCAPG00000006284	LIG4	99	86.600	Cavia_aperea
ENSCHIG00000001019	LIG4	100	86.608	ENSCPOG00000014266	LIG4	100	86.608	Cavia_porcellus
ENSCHIG00000001019	LIG4	100	87.925	ENSCCAG00000019971	LIG4	100	87.925	Cebus_capucinus
ENSCHIG00000001019	LIG4	100	88.035	ENSCATG00000021075	LIG4	100	88.035	Cercocebus_atys
ENSCHIG00000001019	LIG4	100	87.267	ENSCLAG00000003376	LIG4	100	87.267	Chinchilla_lanigera
ENSCHIG00000001019	LIG4	100	88.255	ENSCSAG00000000211	LIG4	100	88.255	Chlorocebus_sabaeus
ENSCHIG00000001019	LIG4	99	76.821	ENSCPBG00000023291	LIG4	100	76.253	Chrysemys_picta_bellii
ENSCHIG00000001019	LIG4	68	47.059	ENSCING00000009536	-	95	47.059	Ciona_intestinalis
ENSCHIG00000001019	LIG4	83	46.518	ENSCSAVG00000010336	-	98	46.518	Ciona_savignyi
ENSCHIG00000001019	LIG4	100	88.145	ENSCANG00000005805	LIG4	100	88.145	Colobus_angolensis_palliatus
ENSCHIG00000001019	LIG4	100	84.868	ENSCGRG00001012072	Lig4	100	84.868	Cricetulus_griseus_chok1gshd
ENSCHIG00000001019	LIG4	100	84.868	ENSCGRG00000013417	Lig4	100	84.868	Cricetulus_griseus_crigri
ENSCHIG00000001019	LIG4	97	66.250	ENSCSEG00000013905	lig4	95	66.250	Cynoglossus_semilaevis
ENSCHIG00000001019	LIG4	99	65.227	ENSCVAG00000007896	lig4	99	65.227	Cyprinodon_variegatus
ENSCHIG00000001019	LIG4	99	63.525	ENSDARG00000060620	lig4	98	63.525	Danio_rerio
ENSCHIG00000001019	LIG4	100	86.952	ENSDNOG00000000513	LIG4	100	86.952	Dasypus_novemcinctus
ENSCHIG00000001019	LIG4	100	85.620	ENSDORG00000027303	Lig4	100	85.620	Dipodomys_ordii
ENSCHIG00000001019	LIG4	89	30.409	FBgn0030506	Lig4	91	30.409	Drosophila_melanogaster
ENSCHIG00000001019	LIG4	99	83.149	ENSETEG00000015563	LIG4	100	83.481	Echinops_telfairi
ENSCHIG00000001019	LIG4	99	44.235	ENSEBUG00000014243	lig4	99	44.235	Eptatretus_burgeri
ENSCHIG00000001019	LIG4	100	88.474	ENSEASG00005022073	LIG4	100	88.474	Equus_asinus_asinus
ENSCHIG00000001019	LIG4	100	88.255	ENSECAG00000003257	LIG4	100	88.255	Equus_caballus
ENSCHIG00000001019	LIG4	99	66.152	ENSELUG00000006787	lig4	99	66.262	Esox_lucius
ENSCHIG00000001019	LIG4	100	88.035	ENSFCAG00000031985	LIG4	100	88.035	Felis_catus
ENSCHIG00000001019	LIG4	88	75.124	ENSFALG00000004214	LIG4	98	75.124	Ficedula_albicollis
ENSCHIG00000001019	LIG4	100	87.267	ENSFDAG00000008973	LIG4	100	87.267	Fukomys_damarensis
ENSCHIG00000001019	LIG4	99	64.784	ENSFHEG00000007398	lig4	89	64.972	Fundulus_heteroclitus
ENSCHIG00000001019	LIG4	85	63.800	ENSGMOG00000012843	lig4	99	63.800	Gadus_morhua
ENSCHIG00000001019	LIG4	100	73.581	ENSGALG00000016854	LIG4	100	73.581	Gallus_gallus
ENSCHIG00000001019	LIG4	99	64.811	ENSGAFG00000019779	lig4	95	64.615	Gambusia_affinis
ENSCHIG00000001019	LIG4	99	63.677	ENSGACG00000014135	lig4	99	63.677	Gasterosteus_aculeatus
ENSCHIG00000001019	LIG4	100	88.913	ENSGGOG00000027771	LIG4	100	88.913	Gorilla_gorilla
ENSCHIG00000001019	LIG4	99	65.055	ENSHBUG00000006245	lig4	99	65.055	Haplochromis_burtoni
ENSCHIG00000001019	LIG4	100	87.047	ENSHGLG00000000718	LIG4	100	87.047	Heterocephalus_glaber_female
ENSCHIG00000001019	LIG4	100	87.047	ENSHGLG00100003265	LIG4	100	87.047	Heterocephalus_glaber_male
ENSCHIG00000001019	LIG4	99	64.505	ENSHCOG00000012010	lig4	99	64.505	Hippocampus_comes
ENSCHIG00000001019	LIG4	99	64.874	ENSIPUG00000013748	lig4	99	64.874	Ictalurus_punctatus
ENSCHIG00000001019	LIG4	100	87.267	ENSSTOG00000024303	LIG4	100	87.267	Ictidomys_tridecemlineatus
ENSCHIG00000001019	LIG4	100	85.730	ENSJJAG00000006750	Lig4	100	85.730	Jaculus_jaculus
ENSCHIG00000001019	LIG4	99	64.784	ENSKMAG00000001149	lig4	99	64.784	Kryptolebias_marmoratus
ENSCHIG00000001019	LIG4	91	65.505	ENSLBEG00000014578	lig4	100	65.745	Labrus_bergylta
ENSCHIG00000001019	LIG4	99	71.792	ENSLACG00000003282	LIG4	99	71.792	Latimeria_chalumnae
ENSCHIG00000001019	LIG4	99	69.890	ENSLOCG00000008901	lig4	98	69.890	Lepisosteus_oculatus
ENSCHIG00000001019	LIG4	100	84.885	ENSLAFG00000031152	LIG4	100	84.885	Loxodonta_africana
ENSCHIG00000001019	LIG4	100	88.255	ENSMFAG00000037235	LIG4	100	88.255	Macaca_fascicularis
ENSCHIG00000001019	LIG4	100	88.255	ENSMMUG00000008874	LIG4	100	88.255	Macaca_mulatta
ENSCHIG00000001019	LIG4	100	88.255	ENSMNEG00000023575	LIG4	100	88.255	Macaca_nemestrina
ENSCHIG00000001019	LIG4	100	88.035	ENSMLEG00000026720	LIG4	100	88.035	Mandrillus_leucophaeus
ENSCHIG00000001019	LIG4	99	65.275	ENSMAMG00000008472	lig4	99	65.495	Mastacembelus_armatus
ENSCHIG00000001019	LIG4	99	65.275	ENSMZEG00005001855	lig4	99	65.275	Maylandia_zebra
ENSCHIG00000001019	LIG4	100	74.345	ENSMGAG00000015532	LIG4	99	74.753	Meleagris_gallopavo
ENSCHIG00000001019	LIG4	100	82.766	ENSMOCG00000019000	Lig4	100	82.766	Microtus_ochrogaster
ENSCHIG00000001019	LIG4	99	64.230	ENSMMOG00000004390	lig4	99	64.230	Mola_mola
ENSCHIG00000001019	LIG4	100	81.559	ENSMODG00000025064	LIG4	100	82.018	Monodelphis_domestica
ENSCHIG00000001019	LIG4	99	65.449	ENSMALG00000008555	lig4	99	65.449	Monopterus_albus
ENSCHIG00000001019	LIG4	100	85.071	MGP_CAROLIEiJ_G0030809	Lig4	100	85.071	Mus_caroli
ENSCHIG00000001019	LIG4	100	84.632	ENSMUSG00000049717	Lig4	100	84.632	Mus_musculus
ENSCHIG00000001019	LIG4	100	84.852	MGP_PahariEiJ_G0021270	Lig4	100	84.852	Mus_pahari
ENSCHIG00000001019	LIG4	100	84.413	MGP_SPRETEiJ_G0031917	Lig4	100	84.413	Mus_spretus
ENSCHIG00000001019	LIG4	100	87.925	ENSMPUG00000018675	LIG4	100	87.925	Mustela_putorius_furo
ENSCHIG00000001019	LIG4	100	89.133	ENSMLUG00000001267	LIG4	100	89.133	Myotis_lucifugus
ENSCHIG00000001019	LIG4	100	85.730	ENSNGAG00000013258	Lig4	100	85.730	Nannospalax_galili
ENSCHIG00000001019	LIG4	99	65.055	ENSNBRG00000021252	lig4	99	65.055	Neolamprologus_brichardi
ENSCHIG00000001019	LIG4	100	88.584	ENSNLEG00000007888	LIG4	100	88.584	Nomascus_leucogenys
ENSCHIG00000001019	LIG4	100	85.401	ENSOPRG00000005765	LIG4	100	85.401	Ochotona_princeps
ENSCHIG00000001019	LIG4	100	84.962	ENSODEG00000019683	LIG4	100	84.962	Octodon_degus
ENSCHIG00000001019	LIG4	99	64.835	ENSONIG00000011969	lig4	98	65.055	Oreochromis_niloticus
ENSCHIG00000001019	LIG4	100	87.816	ENSOCUG00000015734	LIG4	100	87.816	Oryctolagus_cuniculus
ENSCHIG00000001019	LIG4	99	64.615	ENSORLG00000004041	lig4	99	64.615	Oryzias_latipes
ENSCHIG00000001019	LIG4	99	65.055	ENSORLG00020019607	lig4	99	65.055	Oryzias_latipes_hni
ENSCHIG00000001019	LIG4	99	64.725	ENSORLG00015017754	lig4	99	64.725	Oryzias_latipes_hsok
ENSCHIG00000001019	LIG4	74	69.527	ENSOMEG00000003459	lig4	98	69.527	Oryzias_melastigma
ENSCHIG00000001019	LIG4	100	86.513	ENSOGAG00000032120	LIG4	99	86.513	Otolemur_garnettii
ENSCHIG00000001019	LIG4	82	99.060	ENSOARG00000005590	LIG4	98	99.060	Ovis_aries
ENSCHIG00000001019	LIG4	100	88.584	ENSPPAG00000032998	LIG4	100	88.584	Pan_paniscus
ENSCHIG00000001019	LIG4	100	88.804	ENSPPRG00000017804	LIG4	100	88.804	Panthera_pardus
ENSCHIG00000001019	LIG4	100	88.804	ENSPTIG00000010051	LIG4	100	88.804	Panthera_tigris_altaica
ENSCHIG00000001019	LIG4	100	88.694	ENSPTRG00000006025	LIG4	100	88.694	Pan_troglodytes
ENSCHIG00000001019	LIG4	100	88.145	ENSPANG00000007562	LIG4	100	88.145	Papio_anubis
ENSCHIG00000001019	LIG4	99	66.081	ENSPKIG00000011645	lig4	98	66.081	Paramormyrops_kingsleyae
ENSCHIG00000001019	LIG4	99	76.593	ENSPSIG00000001504	LIG4	99	76.593	Pelodiscus_sinensis
ENSCHIG00000001019	LIG4	99	62.667	ENSPMGG00000013486	lig4	99	62.239	Periophthalmus_magnuspinnatus
ENSCHIG00000001019	LIG4	100	84.430	ENSPEMG00000000076	Lig4	100	84.430	Peromyscus_maniculatus_bairdii
ENSCHIG00000001019	LIG4	100	82.018	ENSPCIG00000021882	LIG4	100	82.018	Phascolarctos_cinereus
ENSCHIG00000001019	LIG4	99	64.850	ENSPFOG00000000797	lig4	99	64.725	Poecilia_formosa
ENSCHIG00000001019	LIG4	99	64.739	ENSPLAG00000001196	lig4	99	64.615	Poecilia_latipinna
ENSCHIG00000001019	LIG4	99	65.072	ENSPMEG00000021353	lig4	99	64.945	Poecilia_mexicana
ENSCHIG00000001019	LIG4	99	65.184	ENSPREG00000007323	lig4	99	64.725	Poecilia_reticulata
ENSCHIG00000001019	LIG4	100	88.804	ENSPPYG00000005540	LIG4	100	88.804	Pongo_abelii
ENSCHIG00000001019	LIG4	100	88.364	ENSPVAG00000016403	LIG4	100	88.364	Pteropus_vampyrus
ENSCHIG00000001019	LIG4	99	65.165	ENSPNYG00000009660	lig4	99	65.165	Pundamilia_nyererei
ENSCHIG00000001019	LIG4	100	63.855	ENSPNAG00000028056	lig4	100	63.855	Pygocentrus_nattereri
ENSCHIG00000001019	LIG4	100	63.855	ENSPNAG00000028069	LIG4	100	63.855	Pygocentrus_nattereri
ENSCHIG00000001019	LIG4	100	83.315	ENSRNOG00000014605	Lig4	100	83.315	Rattus_norvegicus
ENSCHIG00000001019	LIG4	100	86.828	ENSRBIG00000039962	LIG4	100	86.828	Rhinopithecus_bieti
ENSCHIG00000001019	LIG4	100	87.816	ENSRROG00000006040	LIG4	100	87.816	Rhinopithecus_roxellana
ENSCHIG00000001019	LIG4	100	87.267	ENSSBOG00000019029	LIG4	100	87.267	Saimiri_boliviensis_boliviensis
ENSCHIG00000001019	LIG4	100	78.595	ENSSHAG00000009525	LIG4	100	79.167	Sarcophilus_harrisii
ENSCHIG00000001019	LIG4	100	64.410	ENSSFOG00015012835	lig4	100	64.410	Scleropages_formosus
ENSCHIG00000001019	LIG4	99	63.455	ENSSMAG00000011267	lig4	99	63.455	Scophthalmus_maximus
ENSCHIG00000001019	LIG4	99	65.854	ENSSDUG00000010343	lig4	98	65.854	Seriola_dumerili
ENSCHIG00000001019	LIG4	99	64.066	ENSSLDG00000003239	lig4	99	64.066	Seriola_lalandi_dorsalis
ENSCHIG00000001019	LIG4	100	83.698	ENSSARG00000006573	LIG4	100	83.698	Sorex_araneus
ENSCHIG00000001019	LIG4	93	75.948	ENSSPUG00000002444	LIG4	100	75.948	Sphenodon_punctatus
ENSCHIG00000001019	LIG4	99	65.055	ENSSPAG00000001609	lig4	99	65.055	Stegastes_partitus
ENSCHIG00000001019	LIG4	100	88.584	ENSSSCG00000009540	LIG4	100	88.584	Sus_scrofa
ENSCHIG00000001019	LIG4	99	74.336	ENSTGUG00000010795	LIG4	99	74.336	Taeniopygia_guttata
ENSCHIG00000001019	LIG4	99	64.615	ENSTRUG00000009984	lig4	99	64.615	Takifugu_rubripes
ENSCHIG00000001019	LIG4	99	65.165	ENSTNIG00000010348	lig4	99	65.385	Tetraodon_nigroviridis
ENSCHIG00000001019	LIG4	100	87.486	ENSTBEG00000017741	LIG4	100	87.486	Tupaia_belangeri
ENSCHIG00000001019	LIG4	100	90.670	ENSTTRG00000012660	LIG4	100	90.670	Tursiops_truncatus
ENSCHIG00000001019	LIG4	100	87.816	ENSUAMG00000003773	LIG4	100	87.816	Ursus_americanus
ENSCHIG00000001019	LIG4	99	71.586	ENSXETG00000002654	lig4	99	71.586	Xenopus_tropicalis
ENSCHIG00000001019	LIG4	99	64.961	ENSXCOG00000017401	lig4	99	64.505	Xiphophorus_couchianus
ENSCHIG00000001019	LIG4	99	65.222	ENSXMAG00000015142	lig4	99	64.764	Xiphophorus_maculatus