EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000001534 (Gene tree)
Gene ID: 102191751
Gene Symbol: RIOK1
Alias: AD034|FLJ30006|RRP10|bA288G3.1
Full Name: RIO kinase 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 27608 bases
Position: chr23:2441066-2468673
Accession: 102191751
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000000983	RIO1	PF01163.22	1.5e-76	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000002145	RIOK1-201	6000	XM_005696894	ENSCHIP00000000983	568 (aa)	XP_005696951	UPI0003AFA4BD

Gene Model

Click here to download ENSCHIG00000001534's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000001534's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000001534	RIOK1	53	42.492	ENSCHIG00000009312	RIOK3	61	42.492

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000001534	RIOK1	100	87.676	ENSG00000124784	RIOK1	100	87.676	Homo_sapiens
ENSCHIG00000001534	RIOK1	57	66.975	ENSAPOG00000015632	riok1	99	66.975	Acanthochromis_polyacanthus
ENSCHIG00000001534	RIOK1	100	88.928	ENSAMEG00000017367	RIOK1	100	88.049	Ailuropoda_melanoleuca
ENSCHIG00000001534	RIOK1	88	70.341	ENSACIG00000003735	riok1	85	72.327	Amphilophus_citrinellus
ENSCHIG00000001534	RIOK1	99	65.719	ENSAOCG00000011818	riok1	100	65.125	Amphiprion_ocellaris
ENSCHIG00000001534	RIOK1	99	66.135	ENSAPEG00000001345	riok1	100	65.542	Amphiprion_percula
ENSCHIG00000001534	RIOK1	82	71.058	ENSATEG00000006594	riok1	99	71.058	Anabas_testudineus
ENSCHIG00000001534	RIOK1	84	82.255	ENSAPLG00000004196	RIOK1	100	82.881	Anas_platyrhynchos
ENSCHIG00000001534	RIOK1	100	74.431	ENSACAG00000000695	RIOK1	100	74.301	Anolis_carolinensis
ENSCHIG00000001534	RIOK1	100	76.408	ENSANAG00000023777	RIOK1	100	77.465	Aotus_nancymaae
ENSCHIG00000001534	RIOK1	99	65.719	ENSACLG00000015799	riok1	99	65.957	Astatotilapia_calliptera
ENSCHIG00000001534	RIOK1	99	66.151	ENSAMXG00000015286	riok1	99	65.870	Astyanax_mexicanus
ENSCHIG00000001534	RIOK1	100	96.479	ENSBTAG00000013821	RIOK1	100	96.479	Bos_taurus
ENSCHIG00000001534	RIOK1	81	47.835	WBGene00019698	riok-1	85	47.323	Caenorhabditis_elegans
ENSCHIG00000001534	RIOK1	100	86.620	ENSCJAG00000042960	RIOK1	100	87.148	Callithrix_jacchus
ENSCHIG00000001534	RIOK1	100	87.873	ENSCAFG00000009563	RIOK1	100	87.170	Canis_familiaris
ENSCHIG00000001534	RIOK1	96	85.766	ENSCAFG00020013233	RIOK1	98	85.036	Canis_lupus_dingo
ENSCHIG00000001534	RIOK1	66	87.268	ENSTSYG00000011368	RIOK1	100	90.520	Carlito_syrichta
ENSCHIG00000001534	RIOK1	79	87.556	ENSCAPG00000008489	RIOK1	100	87.284	Cavia_aperea
ENSCHIG00000001534	RIOK1	98	83.094	ENSCPOG00000009882	RIOK1	100	83.509	Cavia_porcellus
ENSCHIG00000001534	RIOK1	100	86.444	ENSCCAG00000024061	RIOK1	100	87.500	Cebus_capucinus
ENSCHIG00000001534	RIOK1	100	86.268	ENSCATG00000001548	RIOK1	100	87.148	Cercocebus_atys
ENSCHIG00000001534	RIOK1	100	88.049	ENSCLAG00000003522	RIOK1	100	88.049	Chinchilla_lanigera
ENSCHIG00000001534	RIOK1	94	85.902	ENSCSAG00000007396	RIOK1	98	86.842	Chlorocebus_sabaeus
ENSCHIG00000001534	RIOK1	85	77.987	ENSCHOG00000001873	RIOK1	85	77.987	Choloepus_hoffmanni
ENSCHIG00000001534	RIOK1	94	75.797	ENSCPBG00000008685	RIOK1	91	75.610	Chrysemys_picta_bellii
ENSCHIG00000001534	RIOK1	100	86.444	ENSCANG00000032919	RIOK1	100	87.500	Colobus_angolensis_palliatus
ENSCHIG00000001534	RIOK1	100	78.873	ENSCGRG00001018868	Riok1	100	78.873	Cricetulus_griseus_chok1gshd
ENSCHIG00000001534	RIOK1	100	78.873	ENSCGRG00000008015	Riok1	100	78.873	Cricetulus_griseus_crigri
ENSCHIG00000001534	RIOK1	88	49.602	ENSCSEG00000015014	riok1	86	49.697	Cynoglossus_semilaevis
ENSCHIG00000001534	RIOK1	57	65.337	ENSCVAG00000011291	riok1	99	65.337	Cyprinodon_variegatus
ENSCHIG00000001534	RIOK1	99	67.135	ENSDARG00000016399	riok1	100	67.668	Danio_rerio
ENSCHIG00000001534	RIOK1	100	84.817	ENSDNOG00000015813	RIOK1	100	84.991	Dasypus_novemcinctus
ENSCHIG00000001534	RIOK1	100	85.263	ENSDORG00000008530	Riok1	100	85.088	Dipodomys_ordii
ENSCHIG00000001534	RIOK1	77	53.125	FBgn0036187	RIOK1	82	52.439	Drosophila_melanogaster
ENSCHIG00000001534	RIOK1	100	83.627	ENSETEG00000020273	RIOK1	100	83.099	Echinops_telfairi
ENSCHIG00000001534	RIOK1	99	61.837	ENSEBUG00000013672	riok1	99	61.837	Eptatretus_burgeri
ENSCHIG00000001534	RIOK1	94	88.722	ENSEASG00005012032	RIOK1	94	88.722	Equus_asinus_asinus
ENSCHIG00000001534	RIOK1	100	88.732	ENSECAG00000009007	RIOK1	100	88.732	Equus_caballus
ENSCHIG00000001534	RIOK1	77	74.545	ENSEEUG00000007123	RIOK1	100	74.545	Erinaceus_europaeus
ENSCHIG00000001534	RIOK1	99	66.548	ENSELUG00000017029	riok1	99	66.548	Esox_lucius
ENSCHIG00000001534	RIOK1	100	87.587	ENSFCAG00000027290	RIOK1	100	87.413	Felis_catus
ENSCHIG00000001534	RIOK1	100	76.056	ENSFALG00000013244	RIOK1	100	76.626	Ficedula_albicollis
ENSCHIG00000001534	RIOK1	100	85.764	ENSFDAG00000019139	RIOK1	100	85.589	Fukomys_damarensis
ENSCHIG00000001534	RIOK1	66	77.188	ENSFHEG00000021419	riok1	83	77.188	Fundulus_heteroclitus
ENSCHIG00000001534	RIOK1	73	69.807	ENSGMOG00000018668	riok1	92	72.519	Gadus_morhua
ENSCHIG00000001534	RIOK1	58	74.848	ENSGALG00000012795	RIOK1	100	79.008	Gallus_gallus
ENSCHIG00000001534	RIOK1	84	60.915	ENSGAFG00000004091	riok1	79	62.762	Gambusia_affinis
ENSCHIG00000001534	RIOK1	97	63.521	ENSGACG00000002496	riok1	91	72.746	Gasterosteus_aculeatus
ENSCHIG00000001534	RIOK1	82	79.355	ENSGAGG00000002262	RIOK1	98	78.280	Gopherus_agassizii
ENSCHIG00000001534	RIOK1	91	87.593	ENSGGOG00000011037	RIOK1	100	71.479	Gorilla_gorilla
ENSCHIG00000001534	RIOK1	100	82.777	ENSHGLG00000008699	RIOK1	100	82.425	Heterocephalus_glaber_female
ENSCHIG00000001534	RIOK1	100	82.953	ENSHGLG00100008188	RIOK1	100	82.601	Heterocephalus_glaber_male
ENSCHIG00000001534	RIOK1	88	68.263	ENSHCOG00000013275	riok1	91	68.776	Hippocampus_comes
ENSCHIG00000001534	RIOK1	99	68.246	ENSIPUG00000003290	riok1	100	67.931	Ictalurus_punctatus
ENSCHIG00000001534	RIOK1	100	86.116	ENSSTOG00000009289	RIOK1	100	84.710	Ictidomys_tridecemlineatus
ENSCHIG00000001534	RIOK1	100	83.099	ENSJJAG00000015152	Riok1	100	83.099	Jaculus_jaculus
ENSCHIG00000001534	RIOK1	68	75.064	ENSKMAG00000019378	riok1	99	75.064	Kryptolebias_marmoratus
ENSCHIG00000001534	RIOK1	88	69.739	ENSLBEG00000016650	riok1	86	70.732	Labrus_bergylta
ENSCHIG00000001534	RIOK1	100	65.217	ENSLACG00000000300	RIOK1	100	65.052	Latimeria_chalumnae
ENSCHIG00000001534	RIOK1	99	70.285	ENSLOCG00000011728	riok1	99	70.702	Lepisosteus_oculatus
ENSCHIG00000001534	RIOK1	99	85.765	ENSLAFG00000005504	RIOK1	100	85.409	Loxodonta_africana
ENSCHIG00000001534	RIOK1	100	85.739	ENSMFAG00000029990	RIOK1	100	86.620	Macaca_fascicularis
ENSCHIG00000001534	RIOK1	100	85.915	ENSMMUG00000015577	RIOK1	100	86.444	Macaca_mulatta
ENSCHIG00000001534	RIOK1	100	82.746	ENSMNEG00000034396	RIOK1	99	87.069	Macaca_nemestrina
ENSCHIG00000001534	RIOK1	100	86.444	ENSMLEG00000026327	RIOK1	100	87.324	Mandrillus_leucophaeus
ENSCHIG00000001534	RIOK1	98	65.350	ENSMAMG00000019557	riok1	99	66.429	Mastacembelus_armatus
ENSCHIG00000001534	RIOK1	99	65.719	ENSMZEG00005019482	riok1	99	66.489	Maylandia_zebra
ENSCHIG00000001534	RIOK1	100	73.298	ENSMGAG00000003816	RIOK1	100	75.614	Meleagris_gallopavo
ENSCHIG00000001534	RIOK1	100	79.930	ENSMAUG00000012751	Riok1	100	79.577	Mesocricetus_auratus
ENSCHIG00000001534	RIOK1	100	87.676	ENSMICG00000044301	RIOK1	84	87.676	Microcebus_murinus
ENSCHIG00000001534	RIOK1	100	78.521	ENSMOCG00000017032	Riok1	100	78.521	Microtus_ochrogaster
ENSCHIG00000001534	RIOK1	84	62.353	ENSMMOG00000020598	riok1	87	62.745	Mola_mola
ENSCHIG00000001534	RIOK1	100	75.347	ENSMODG00000009964	RIOK1	100	76.667	Monodelphis_domestica
ENSCHIG00000001534	RIOK1	88	63.327	ENSMALG00000019982	riok1	89	65.199	Monopterus_albus
ENSCHIG00000001534	RIOK1	99	79.323	MGP_CAROLIEiJ_G0018439	Riok1	99	79.501	Mus_caroli
ENSCHIG00000001534	RIOK1	99	78.826	ENSMUSG00000021428	Riok1	99	79.004	Mus_musculus
ENSCHIG00000001534	RIOK1	99	78.966	MGP_PahariEiJ_G0019507	Riok1	99	78.966	Mus_pahari
ENSCHIG00000001534	RIOK1	99	78.788	MGP_SPRETEiJ_G0019319	Riok1	99	78.966	Mus_spretus
ENSCHIG00000001534	RIOK1	100	86.340	ENSMPUG00000000570	RIOK1	100	86.340	Mustela_putorius_furo
ENSCHIG00000001534	RIOK1	100	87.698	ENSMLUG00000015312	RIOK1	100	87.698	Myotis_lucifugus
ENSCHIG00000001534	RIOK1	100	85.387	ENSNGAG00000021734	Riok1	100	86.092	Nannospalax_galili
ENSCHIG00000001534	RIOK1	70	78.535	ENSNBRG00000017489	riok1	79	76.570	Neolamprologus_brichardi
ENSCHIG00000001534	RIOK1	100	77.817	ENSNLEG00000011621	RIOK1	100	77.817	Nomascus_leucogenys
ENSCHIG00000001534	RIOK1	84	51.261	ENSMEUG00000006679	-	84	52.521	Notamacropus_eugenii
ENSCHIG00000001534	RIOK1	65	83.827	ENSOPRG00000009524	RIOK1	100	83.827	Ochotona_princeps
ENSCHIG00000001534	RIOK1	71	74.314	ENSODEG00000005663	RIOK1	100	74.314	Octodon_degus
ENSCHIG00000001534	RIOK1	98	66.312	ENSONIG00000014010	riok1	98	66.373	Oreochromis_niloticus
ENSCHIG00000001534	RIOK1	82	84.052	ENSOANG00000012553	RIOK1	100	84.052	Ornithorhynchus_anatinus
ENSCHIG00000001534	RIOK1	100	84.359	ENSOCUG00000011824	RIOK1	100	84.359	Oryctolagus_cuniculus
ENSCHIG00000001534	RIOK1	98	67.143	ENSORLG00000008221	riok1	86	73.444	Oryzias_latipes
ENSCHIG00000001534	RIOK1	98	64.811	ENSORLG00020013838	riok1	60	71.816	Oryzias_latipes_hni
ENSCHIG00000001534	RIOK1	98	66.250	ENSORLG00015009817	riok1	98	66.964	Oryzias_latipes_hsok
ENSCHIG00000001534	RIOK1	98	65.709	ENSOMEG00000002758	riok1	88	66.190	Oryzias_melastigma
ENSCHIG00000001534	RIOK1	100	78.207	ENSOGAG00000010192	RIOK1	100	77.329	Otolemur_garnettii
ENSCHIG00000001534	RIOK1	100	98.415	ENSOARG00000017747	RIOK1	100	98.415	Ovis_aries
ENSCHIG00000001534	RIOK1	100	77.856	ENSPPAG00000016349	RIOK1	100	86.544	Pan_paniscus
ENSCHIG00000001534	RIOK1	100	87.413	ENSPPRG00000001932	RIOK1	100	87.238	Panthera_pardus
ENSCHIG00000001534	RIOK1	100	87.587	ENSPTIG00000018545	RIOK1	100	87.413	Panthera_tigris_altaica
ENSCHIG00000001534	RIOK1	100	87.500	ENSPTRG00000017700	RIOK1	100	87.500	Pan_troglodytes
ENSCHIG00000001534	RIOK1	100	86.268	ENSPANG00000016522	RIOK1	100	87.148	Papio_anubis
ENSCHIG00000001534	RIOK1	99	67.888	ENSPKIG00000006442	riok1	100	68.496	Paramormyrops_kingsleyae
ENSCHIG00000001534	RIOK1	100	77.465	ENSPSIG00000006488	RIOK1	99	78.207	Pelodiscus_sinensis
ENSCHIG00000001534	RIOK1	70	72.405	ENSPMGG00000017807	riok1	96	68.056	Periophthalmus_magnuspinnatus
ENSCHIG00000001534	RIOK1	100	79.930	ENSPEMG00000017844	Riok1	100	79.754	Peromyscus_maniculatus_bairdii
ENSCHIG00000001534	RIOK1	71	68.447	ENSPMAG00000006351	riok1	98	68.447	Petromyzon_marinus
ENSCHIG00000001534	RIOK1	94	75.836	ENSPCIG00000012653	RIOK1	94	75.651	Phascolarctos_cinereus
ENSCHIG00000001534	RIOK1	98	62.298	ENSPFOG00000011532	riok1	87	69.023	Poecilia_formosa
ENSCHIG00000001534	RIOK1	98	62.791	ENSPLAG00000001341	riok1	99	62.298	Poecilia_latipinna
ENSCHIG00000001534	RIOK1	98	62.298	ENSPMEG00000007710	riok1	89	69.439	Poecilia_mexicana
ENSCHIG00000001534	RIOK1	98	63.262	ENSPREG00000009237	riok1	99	63.016	Poecilia_reticulata
ENSCHIG00000001534	RIOK1	100	87.522	ENSPPYG00000016207	RIOK1	100	87.522	Pongo_abelii
ENSCHIG00000001534	RIOK1	100	71.655	ENSPCAG00000007892	RIOK1	100	71.479	Procavia_capensis
ENSCHIG00000001534	RIOK1	100	87.215	ENSPVAG00000014091	RIOK1	100	87.391	Pteropus_vampyrus
ENSCHIG00000001534	RIOK1	58	69.725	ENSPNYG00000004465	riok1	100	70.336	Pundamilia_nyererei
ENSCHIG00000001534	RIOK1	99	67.430	ENSPNAG00000015435	riok1	99	67.434	Pygocentrus_nattereri
ENSCHIG00000001534	RIOK1	99	79.323	ENSRNOG00000014049	Riok1	100	85.129	Rattus_norvegicus
ENSCHIG00000001534	RIOK1	100	86.268	ENSRBIG00000036685	RIOK1	100	86.796	Rhinopithecus_bieti
ENSCHIG00000001534	RIOK1	100	86.444	ENSRROG00000036611	RIOK1	100	86.972	Rhinopithecus_roxellana
ENSCHIG00000001534	RIOK1	59	41.304	YOR119C	RIO1	96	37.725	Saccharomyces_cerevisiae
ENSCHIG00000001534	RIOK1	100	88.028	ENSSBOG00000012588	RIOK1	100	88.028	Saimiri_boliviensis_boliviensis
ENSCHIG00000001534	RIOK1	85	77.664	ENSSHAG00000003091	RIOK1	93	77.597	Sarcophilus_harrisii
ENSCHIG00000001534	RIOK1	86	73.566	ENSSFOG00015001035	riok1	99	68.984	Scleropages_formosus
ENSCHIG00000001534	RIOK1	58	64.526	ENSSDUG00000007291	riok1	100	64.526	Seriola_dumerili
ENSCHIG00000001534	RIOK1	98	66.487	ENSSLDG00000017657	riok1	99	66.726	Seriola_lalandi_dorsalis
ENSCHIG00000001534	RIOK1	85	68.050	ENSSPUG00000007624	RIOK1	82	68.050	Sphenodon_punctatus
ENSCHIG00000001534	RIOK1	99	66.963	ENSSPAG00000022710	riok1	100	66.845	Stegastes_partitus
ENSCHIG00000001534	RIOK1	100	86.620	ENSSSCG00000001024	RIOK1	100	86.268	Sus_scrofa
ENSCHIG00000001534	RIOK1	100	75.393	ENSTGUG00000002331	RIOK1	100	76.182	Taeniopygia_guttata
ENSCHIG00000001534	RIOK1	52	62.416	ENSTRUG00000001575	-	100	62.416	Takifugu_rubripes
ENSCHIG00000001534	RIOK1	73	63.007	ENSTRUG00000002854	riok1	94	64.508	Takifugu_rubripes
ENSCHIG00000001534	RIOK1	99	59.965	ENSTNIG00000003078	riok1	99	60.622	Tetraodon_nigroviridis
ENSCHIG00000001534	RIOK1	100	82.394	ENSTBEG00000016730	RIOK1	100	82.746	Tupaia_belangeri
ENSCHIG00000001534	RIOK1	73	100.000	ENSTTRG00000017335	RIOK1	87	100.000	Tursiops_truncatus
ENSCHIG00000001534	RIOK1	94	88.368	ENSUAMG00000003721	RIOK1	96	87.430	Ursus_americanus
ENSCHIG00000001534	RIOK1	100	88.752	ENSUMAG00000018461	RIOK1	100	87.873	Ursus_maritimus
ENSCHIG00000001534	RIOK1	70	86.598	ENSVPAG00000010813	-	73	86.598	Vicugna_pacos
ENSCHIG00000001534	RIOK1	100	87.522	ENSVVUG00000005018	RIOK1	100	86.819	Vulpes_vulpes
ENSCHIG00000001534	RIOK1	88	72.545	ENSXETG00000020436	riok1	86	73.868	Xenopus_tropicalis
ENSCHIG00000001534	RIOK1	84	65.336	ENSXCOG00000000245	riok1	100	66.597	Xiphophorus_couchianus
ENSCHIG00000001534	RIOK1	70	74.436	ENSXMAG00000014572	riok1	83	71.663	Xiphophorus_maculatus