EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCHIG00000001618 (Gene tree)
Gene ID
102171624
Gene Symbol
PUF60
Alias
FIR|RoBPI|SIAHBP1
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Capra_hircus
Status
putative
Strand
Plus strand
Length
7554 bases
Position
chrLWLT01000127.1:28217-35770
Accession
102171624
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCHIP00000001191RRM_1PF00076.221.2e-4312
ENSCHIP00000001191RRM_1PF00076.221.2e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCHIT00000003079PUF60-2011806XM_018045168ENSCHIP00000001191601 (aa)XP_017900657UPI000D195E30
Gene Model
Click here to download ENSCHIG00000001618's gene model file
Pathways
Pathway IDPathway NameSource
chx03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000001618's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCHIG00000001618PUF609299.093ENSG00000179950PUF6010099.225Homo_sapiens
ENSCHIG00000001618PUF608785.417ENSAPOG00000001713puf60b9985.417Acanthochromis_polyacanthus
ENSCHIG00000001618PUF609297.636ENSAMEG00000006406PUF609997.636Ailuropoda_melanoleuca
ENSCHIG00000001618PUF608677.159ENSACIG00000003263-9977.011Amphilophus_citrinellus
ENSCHIG00000001618PUF608685.605ENSACIG00000021705puf60b10085.605Amphilophus_citrinellus
ENSCHIG00000001618PUF608785.389ENSAOCG00000005395puf60b10086.180Amphiprion_ocellaris
ENSCHIG00000001618PUF608980.037ENSAOCG00000015558-9981.939Amphiprion_ocellaris
ENSCHIG00000001618PUF608672.745ENSAPEG00000001836-9973.954Amphiprion_percula
ENSCHIG00000001618PUF608779.924ENSAPEG00000011923puf60b9979.924Amphiprion_percula
ENSCHIG00000001618PUF608780.952ENSATEG00000006303-9981.333Anabas_testudineus
ENSCHIG00000001618PUF608785.606ENSATEG00000001730puf60b9985.606Anabas_testudineus
ENSCHIG00000001618PUF608798.276ENSAPLG00000010150PUF6010098.276Anas_platyrhynchos
ENSCHIG00000001618PUF608796.374ENSACAG00000001645PUF609796.015Anolis_carolinensis
ENSCHIG00000001618PUF609298.378ENSANAG00000018626PUF6010099.225Aotus_nancymaae
ENSCHIG00000001618PUF608685.605ENSACLG00000004462puf60b10085.605Astatotilapia_calliptera
ENSCHIG00000001618PUF608784.112ENSAMXG00000036570puf60a10081.273Astyanax_mexicanus
ENSCHIG00000001618PUF608676.636ENSAMXG00000041030puf60b10074.906Astyanax_mexicanus
ENSCHIG00000001618PUF609299.278ENSBTAG00000037493PUF6099100.000Bos_taurus
ENSCHIG00000001618PUF606950.667WBGene00004389rnp-68351.485Caenorhabditis_elegans
ENSCHIG00000001618PUF609298.381ENSCJAG00000021485PUF609899.425Callithrix_jacchus
ENSCHIG00000001618PUF609398.750ENSCAFG00000001400PUF6010098.750Canis_familiaris
ENSCHIG00000001618PUF609299.275ENSCAFG00020018754PUF609999.275Canis_lupus_dingo
ENSCHIG00000001618PUF609298.381ENSTSYG00000011912PUF6010099.612Carlito_syrichta
ENSCHIG00000001618PUF609293.178ENSCPOG00000014613PUF609594.007Cavia_porcellus
ENSCHIG00000001618PUF609298.378ENSCCAG00000007744PUF609998.378Cebus_capucinus
ENSCHIG00000001618PUF609299.093ENSCATG00000035405PUF609999.093Cercocebus_atys
ENSCHIG00000001618PUF609298.561ENSCLAG00000009154PUF609998.561Chinchilla_lanigera
ENSCHIG00000001618PUF608699.225ENSCSAG00000008878PUF6010099.225Chlorocebus_sabaeus
ENSCHIG00000001618PUF608798.276ENSCPBG00000005595PUF609898.276Chrysemys_picta_bellii
ENSCHIG00000001618PUF605559.882ENSCING00000002156-8759.882Ciona_intestinalis
ENSCHIG00000001618PUF608748.327ENSCING00000008436-9848.308Ciona_intestinalis
ENSCHIG00000001618PUF608449.703ENSCSAVG00000004765-9749.304Ciona_savignyi
ENSCHIG00000001618PUF608455.556ENSCSAVG00000001385-9955.192Ciona_savignyi
ENSCHIG00000001618PUF607595.354ENSCANG00000041843PUF6010099.281Colobus_angolensis_palliatus
ENSCHIG00000001618PUF609297.842ENSCGRG00001017442Puf609997.842Cricetulus_griseus_chok1gshd
ENSCHIG00000001618PUF609297.326ENSCGRG00000003717Puf609997.326Cricetulus_griseus_crigri
ENSCHIG00000001618PUF608785.199ENSCSEG00000019887puf60b9384.820Cynoglossus_semilaevis
ENSCHIG00000001618PUF609567.474ENSCSEG00000014845-8974.570Cynoglossus_semilaevis
ENSCHIG00000001618PUF608684.837ENSCVAG00000009386puf60b10085.988Cyprinodon_variegatus
ENSCHIG00000001618PUF607879.747ENSCVAG00000001560-9879.747Cyprinodon_variegatus
ENSCHIG00000001618PUF608686.742ENSDARG00000032175puf60a9993.617Danio_rerio
ENSCHIG00000001618PUF608679.135ENSDARG00000001241puf60b9996.825Danio_rerio
ENSCHIG00000001618PUF609381.851ENSDNOG00000043278PUF6010081.851Dasypus_novemcinctus
ENSCHIG00000001618PUF609299.274ENSDORG00000004585Puf6010099.274Dipodomys_ordii
ENSCHIG00000001618PUF608449.742FBgn0028577hfp9946.346Drosophila_melanogaster
ENSCHIG00000001618PUF608470.179ENSEBUG00000005470-8869.781Eptatretus_burgeri
ENSCHIG00000001618PUF608760.535ENSEBUG00000014291puf60b8563.851Eptatretus_burgeri
ENSCHIG00000001618PUF609299.275ENSEASG00005009695PUF609999.275Equus_asinus_asinus
ENSCHIG00000001618PUF609299.096ENSECAG00000024681PUF609999.096Equus_caballus
ENSCHIG00000001618PUF608783.681ENSELUG00000006507puf60b9980.586Esox_lucius
ENSCHIG00000001618PUF608983.486ENSELUG00000018443-9885.038Esox_lucius
ENSCHIG00000001618PUF609298.381ENSFCAG00000001045PUF6010099.419Felis_catus
ENSCHIG00000001618PUF608785.632ENSFALG00000001136PUF609886.782Ficedula_albicollis
ENSCHIG00000001618PUF609298.201ENSFDAG00000017177PUF609998.201Fukomys_damarensis
ENSCHIG00000001618PUF608784.440ENSFHEG00000020046puf60b10086.372Fundulus_heteroclitus
ENSCHIG00000001618PUF608279.317ENSFHEG00000021687PUF6010080.164Fundulus_heteroclitus
ENSCHIG00000001618PUF608771.992ENSGMOG00000006392puf60b10071.241Gadus_morhua
ENSCHIG00000001618PUF605798.256ENSGALG00000039901PUF609498.256Gallus_gallus
ENSCHIG00000001618PUF608679.537ENSGAFG00000004334-9978.776Gambusia_affinis
ENSCHIG00000001618PUF608783.871ENSGAFG00000021040puf60b10085.797Gambusia_affinis
ENSCHIG00000001618PUF608670.543ENSGACG00000001484-10069.423Gasterosteus_aculeatus
ENSCHIG00000001618PUF608773.535ENSGACG00000004717puf60b9872.865Gasterosteus_aculeatus
ENSCHIG00000001618PUF608798.269ENSGAGG00000013289PUF609298.276Gopherus_agassizii
ENSCHIG00000001618PUF609299.093ENSGGOG00000004646PUF609999.093Gorilla_gorilla
ENSCHIG00000001618PUF608784.820ENSHBUG00000015118puf60b10085.605Haplochromis_burtoni
ENSCHIG00000001618PUF608781.594ENSHBUG00000009634-9981.025Haplochromis_burtoni
ENSCHIG00000001618PUF609298.201ENSHGLG00000006111PUF609998.201Heterocephalus_glaber_female
ENSCHIG00000001618PUF609298.201ENSHGLG00100012362PUF609998.201Heterocephalus_glaber_male
ENSCHIG00000001618PUF608682.320ENSHCOG00000015541puf60b10081.919Hippocampus_comes
ENSCHIG00000001618PUF608466.798ENSHCOG00000000378-9965.226Hippocampus_comes
ENSCHIG00000001618PUF608678.947ENSIPUG00000004660puf60b9978.719Ictalurus_punctatus
ENSCHIG00000001618PUF608682.231ENSIPUG00000002453puf60a9982.609Ictalurus_punctatus
ENSCHIG00000001618PUF609299.636ENSSTOG00000025037PUF609999.636Ictidomys_tridecemlineatus
ENSCHIG00000001618PUF609298.556ENSJJAG00000001076Puf609998.556Jaculus_jaculus
ENSCHIG00000001618PUF608685.221ENSKMAG00000016745puf60b10086.372Kryptolebias_marmoratus
ENSCHIG00000001618PUF608678.261ENSKMAG00000010106-10075.746Kryptolebias_marmoratus
ENSCHIG00000001618PUF608983.117ENSLBEG00000012505puf60b10083.117Labrus_bergylta
ENSCHIG00000001618PUF606090.909ENSLACG00000005456PUF609990.634Latimeria_chalumnae
ENSCHIG00000001618PUF608889.454ENSLOCG00000010106puf60b9989.163Lepisosteus_oculatus
ENSCHIG00000001618PUF609396.948ENSLAFG00000022929PUF6010096.948Loxodonta_africana
ENSCHIG00000001618PUF609299.093ENSMFAG00000043373PUF609999.234Macaca_fascicularis
ENSCHIG00000001618PUF609298.913ENSMMUG00000013558PUF609998.913Macaca_mulatta
ENSCHIG00000001618PUF609299.093ENSMNEG00000031099PUF609999.093Macaca_nemestrina
ENSCHIG00000001618PUF608699.225ENSMLEG00000040009PUF6010099.225Mandrillus_leucophaeus
ENSCHIG00000001618PUF608884.774ENSMAMG00000010394puf60b10083.551Mastacembelus_armatus
ENSCHIG00000001618PUF608782.543ENSMAMG00000019476-9981.973Mastacembelus_armatus
ENSCHIG00000001618PUF608781.784ENSMZEG00005019425-9981.404Maylandia_zebra
ENSCHIG00000001618PUF608685.605ENSMZEG00005018515puf60b10085.605Maylandia_zebra
ENSCHIG00000001618PUF608798.276ENSMGAG00000013070PUF609898.276Meleagris_gallopavo
ENSCHIG00000001618PUF606697.500ENSMAUG00000014267-9897.500Mesocricetus_auratus
ENSCHIG00000001618PUF608280.361ENSMAUG00000018549-9580.600Mesocricetus_auratus
ENSCHIG00000001618PUF609299.455ENSMICG00000012226PUF609999.617Microcebus_murinus
ENSCHIG00000001618PUF609298.022ENSMOCG00000018780Puf609998.022Microtus_ochrogaster
ENSCHIG00000001618PUF608685.988ENSMMOG00000004217puf60b10085.988Mola_mola
ENSCHIG00000001618PUF608772.762ENSMMOG00000018059-9976.712Mola_mola
ENSCHIG00000001618PUF609297.636ENSMODG00000009161PUF609997.636Monodelphis_domestica
ENSCHIG00000001618PUF608780.455ENSMALG00000000200-9979.057Monopterus_albus
ENSCHIG00000001618PUF608777.652ENSMALG00000006797puf60b9977.652Monopterus_albus
ENSCHIG00000001618PUF609297.842MGP_CAROLIEiJ_G0019910Puf609997.842Mus_caroli
ENSCHIG00000001618PUF609297.842ENSMUSG00000002524Puf609997.842Mus_musculus
ENSCHIG00000001618PUF609297.842MGP_PahariEiJ_G0019920Puf609997.842Mus_pahari
ENSCHIG00000001618PUF609297.842MGP_SPRETEiJ_G0020812Puf609997.842Mus_spretus
ENSCHIG00000001618PUF609299.457ENSMPUG00000008137PUF609899.457Mustela_putorius_furo
ENSCHIG00000001618PUF608792.146ENSMLUG00000013032-9892.146Myotis_lucifugus
ENSCHIG00000001618PUF609398.390ENSMLUG00000000238-10098.390Myotis_lucifugus
ENSCHIG00000001618PUF609298.201ENSNGAG00000000712Puf6010099.225Nannospalax_galili
ENSCHIG00000001618PUF607084.471ENSNBRG00000013047puf60b9784.471Neolamprologus_brichardi
ENSCHIG00000001618PUF608781.973ENSNBRG00000017223-9981.559Neolamprologus_brichardi
ENSCHIG00000001618PUF609299.093ENSNLEG00000002156PUF609999.093Nomascus_leucogenys
ENSCHIG00000001618PUF606499.659ENSOPRG00000002147PUF607599.659Ochotona_princeps
ENSCHIG00000001618PUF608474.162ENSODEG00000015513-9971.563Octodon_degus
ENSCHIG00000001618PUF6068100.000ENSODEG00000014024-98100.000Octodon_degus
ENSCHIG00000001618PUF608782.008ENSONIG00000014030-9981.439Oreochromis_niloticus
ENSCHIG00000001618PUF608784.848ENSONIG00000006247puf60b9984.848Oreochromis_niloticus
ENSCHIG00000001618PUF608578.320ENSOANG00000006962PUF609978.320Ornithorhynchus_anatinus
ENSCHIG00000001618PUF608678.977ENSORLG00000028655-9979.087Oryzias_latipes
ENSCHIG00000001618PUF608785.009ENSORLG00000012279puf60b10085.221Oryzias_latipes
ENSCHIG00000001618PUF608778.868ENSORLG00020018144-9878.977Oryzias_latipes_hni
ENSCHIG00000001618PUF608785.009ENSORLG00020007333puf6010085.221Oryzias_latipes_hni
ENSCHIG00000001618PUF608784.121ENSORLG00015007718puf60b10085.086Oryzias_latipes_hsok
ENSCHIG00000001618PUF608679.127ENSORLG00015016833-9879.238Oryzias_latipes_hsok
ENSCHIG00000001618PUF608779.924ENSOMEG00000022185-9879.886Oryzias_melastigma
ENSCHIG00000001618PUF608782.528ENSOMEG00000001643puf60b9983.232Oryzias_melastigma
ENSCHIG00000001618PUF609399.106ENSOGAG00000006259PUF6010099.106Otolemur_garnettii
ENSCHIG00000001618PUF608797.514ENSOARG00000016235PUF609997.514Ovis_aries
ENSCHIG00000001618PUF609299.093ENSPPAG00000029933PUF609999.093Pan_paniscus
ENSCHIG00000001618PUF609298.381ENSPPRG00000003257PUF6010099.419Panthera_pardus
ENSCHIG00000001618PUF609592.995ENSPTIG00000009795PUF609997.126Panthera_tigris_altaica
ENSCHIG00000001618PUF609398.748ENSPTRG00000043963-10098.748Pan_troglodytes
ENSCHIG00000001618PUF609298.911ENSPTRG00000020670PUF609998.911Pan_troglodytes
ENSCHIG00000001618PUF609299.093ENSPANG00000021936PUF609999.093Papio_anubis
ENSCHIG00000001618PUF608785.822ENSPKIG00000004295puf60a9992.353Paramormyrops_kingsleyae
ENSCHIG00000001618PUF608787.452ENSPKIG00000012204puf60b10088.269Paramormyrops_kingsleyae
ENSCHIG00000001618PUF608798.088ENSPSIG00000004679PUF609998.088Pelodiscus_sinensis
ENSCHIG00000001618PUF608684.542ENSPMGG00000013444puf60b9984.542Periophthalmus_magnuspinnatus
ENSCHIG00000001618PUF609397.153ENSPEMG00000008820Puf609998.022Peromyscus_maniculatus_bairdii
ENSCHIG00000001618PUF609196.527ENSPCIG00000020270PUF609999.424Phascolarctos_cinereus
ENSCHIG00000001618PUF608784.440ENSPFOG00000019217puf60b10082.298Poecilia_formosa
ENSCHIG00000001618PUF608680.925ENSPFOG00000011118-9781.274Poecilia_formosa
ENSCHIG00000001618PUF608685.221ENSPLAG00000010754puf60b10086.372Poecilia_latipinna
ENSCHIG00000001618PUF609177.596ENSPLAG00000017025-9080.888Poecilia_latipinna
ENSCHIG00000001618PUF608784.440ENSPMEG00000000838puf60b10086.372Poecilia_mexicana
ENSCHIG00000001618PUF609177.596ENSPMEG00000009767-9081.274Poecilia_mexicana
ENSCHIG00000001618PUF608781.701ENSPREG00000005440puf60b9983.364Poecilia_reticulata
ENSCHIG00000001618PUF606997.602ENSPPYG00000018951-9597.602Pongo_abelii
ENSCHIG00000001618PUF606999.520ENSPCAG00000014837PUF6010099.520Procavia_capensis
ENSCHIG00000001618PUF609497.345ENSPCOG00000027981PUF609999.425Propithecus_coquereli
ENSCHIG00000001618PUF608699.367ENSPVAG00000016167PUF608199.367Pteropus_vampyrus
ENSCHIG00000001618PUF608781.784ENSPNYG00000004273-9981.404Pundamilia_nyererei
ENSCHIG00000001618PUF608685.605ENSPNYG00000002556puf60b10085.605Pundamilia_nyererei
ENSCHIG00000001618PUF609174.821ENSPNAG00000019415puf60b9174.436Pygocentrus_nattereri
ENSCHIG00000001618PUF608782.386ENSPNAG00000019909puf60a9982.042Pygocentrus_nattereri
ENSCHIG00000001618PUF609197.838ENSRNOG00000009960Puf609997.838Rattus_norvegicus
ENSCHIG00000001618PUF609299.093ENSRBIG00000035274PUF609999.093Rhinopithecus_bieti
ENSCHIG00000001618PUF609299.093ENSRROG00000029360PUF609999.234Rhinopithecus_roxellana
ENSCHIG00000001618PUF608996.822ENSSBOG00000027089PUF609898.084Saimiri_boliviensis_boliviensis
ENSCHIG00000001618PUF608397.390ENSSHAG00000006668PUF609597.390Sarcophilus_harrisii
ENSCHIG00000001618PUF608682.510ENSSFOG00015019619puf60b9986.437Scleropages_formosus
ENSCHIG00000001618PUF608287.324ENSSFOG00015019371puf60a9887.324Scleropages_formosus
ENSCHIG00000001618PUF606492.933ENSSMAG00000016381puf60b7392.933Scophthalmus_maximus
ENSCHIG00000001618PUF608783.643ENSSDUG00000009935puf60b9984.444Seriola_dumerili
ENSCHIG00000001618PUF608680.153ENSSDUG00000007048-9880.344Seriola_dumerili
ENSCHIG00000001618PUF608686.069ENSSLDG00000024011puf60b10084.112Seriola_lalandi_dorsalis
ENSCHIG00000001618PUF608680.266ENSSLDG00000007366-9980.645Seriola_lalandi_dorsalis
ENSCHIG00000001618PUF605686.431ENSSPUG00000013518PUF609485.260Sphenodon_punctatus
ENSCHIG00000001618PUF608782.625ENSSPAG00000012144puf60b10083.925Stegastes_partitus
ENSCHIG00000001618PUF608681.870ENSSPAG00000020285-10082.443Stegastes_partitus
ENSCHIG00000001618PUF609693.043ENSSSCG00000038800PUF6010094.456Sus_scrofa
ENSCHIG00000001618PUF608795.019ENSTGUG00000012797-10095.019Taeniopygia_guttata
ENSCHIG00000001618PUF608784.470ENSTRUG00000005420puf60b10082.991Takifugu_rubripes
ENSCHIG00000001618PUF608677.519ENSTRUG00000008843-10077.519Takifugu_rubripes
ENSCHIG00000001618PUF608784.470ENSTNIG00000013675puf60b10084.280Tetraodon_nigroviridis
ENSCHIG00000001618PUF608777.820ENSTNIG00000003069-10077.820Tetraodon_nigroviridis
ENSCHIG00000001618PUF606681.503ENSTBEG00000001899-10081.792Tupaia_belangeri
ENSCHIG00000001618PUF605396.284ENSTBEG00000002751-9996.271Tupaia_belangeri
ENSCHIG00000001618PUF608699.031ENSTTRG00000017088PUF6010099.031Tursiops_truncatus
ENSCHIG00000001618PUF609299.636ENSUAMG00000024917PUF609999.636Ursus_americanus
ENSCHIG00000001618PUF609394.265ENSUMAG00000000272PUF6010094.086Ursus_maritimus
ENSCHIG00000001618PUF609299.636ENSVVUG00000022527PUF6010099.612Vulpes_vulpes
ENSCHIG00000001618PUF608794.084ENSXETG00000012469puf609994.084Xenopus_tropicalis
ENSCHIG00000001618PUF608681.958ENSXCOG00000012355puf60b10083.109Xiphophorus_couchianus
ENSCHIG00000001618PUF608777.905ENSXMAG00000010507-9977.143Xiphophorus_maculatus
ENSCHIG00000001618PUF608784.440ENSXMAG00000001862puf60b10086.372Xiphophorus_maculatus

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