EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000001799 (Gene tree)
Gene ID: 102188514
Gene Symbol: -
Alias: -
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 40162 bases
Position: chr13:76767537-76807698
Accession: 102188514
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000001101	dsrm	PF00035.26	1.3e-32	1	3
ENSCHIP00000001101	dsrm	PF00035.26	1.3e-32	2	3
ENSCHIP00000001101	dsrm	PF00035.26	1.3e-32	3	3
ENSCHIP00000001108	dsrm	PF00035.26	1.2e-30	1	3
ENSCHIP00000001108	dsrm	PF00035.26	1.2e-30	2	3
ENSCHIP00000001108	dsrm	PF00035.26	1.2e-30	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000002685	-	1974	XM_013968927	ENSCHIP00000001101	577 (aa)	XP_013824381	UPI0003AFF463
ENSCHIT00000002717	-	1443	-	ENSCHIP00000001108	480 (aa)	-	UPI000D18FD86

Gene Model

Click here to download ENSCHIG00000001799's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000001799's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000001799	-	96	47.487	ENSCHIG00000012254	STAU2	88	48.577
ENSCHIG00000001799	-	51	32.000	ENSCHIG00000015333	PRKRA	50	31.765

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000001799	-	100	95.147	ENSG00000124214	STAU1	100	95.147	Homo_sapiens
ENSCHIG00000001799	-	95	70.336	ENSAPOG00000017260	stau1	93	70.336	Acanthochromis_polyacanthus
ENSCHIG00000001799	-	99	94.851	ENSAMEG00000013681	STAU1	95	94.851	Ailuropoda_melanoleuca
ENSCHIG00000001799	-	99	73.757	ENSACIG00000015918	stau1	96	74.405	Amphilophus_citrinellus
ENSCHIG00000001799	-	95	71.269	ENSAOCG00000012224	stau1	93	71.269	Amphiprion_ocellaris
ENSCHIG00000001799	-	99	71.455	ENSAPEG00000012308	stau1	96	71.455	Amphiprion_percula
ENSCHIG00000001799	-	99	73.973	ENSATEG00000024600	stau1	99	73.973	Anabas_testudineus
ENSCHIG00000001799	-	99	86.888	ENSAPLG00000010527	STAU1	94	86.888	Anas_platyrhynchos
ENSCHIG00000001799	-	99	86.523	ENSACAG00000015909	STAU1	95	86.523	Anolis_carolinensis
ENSCHIG00000001799	-	100	94.340	ENSANAG00000032714	STAU1	100	94.340	Aotus_nancymaae
ENSCHIG00000001799	-	99	72.427	ENSACLG00000012270	stau1	96	72.427	Astatotilapia_calliptera
ENSCHIG00000001799	-	95	71.325	ENSAMXG00000016812	stau1	99	69.151	Astyanax_mexicanus
ENSCHIG00000001799	-	100	98.094	ENSBTAG00000000241	STAU1	100	98.094	Bos_taurus
ENSCHIG00000001799	-	100	95.321	ENSCJAG00000016233	STAU1	100	95.321	Callithrix_jacchus
ENSCHIG00000001799	-	100	95.321	ENSCAFG00000011347	STAU1	100	93.798	Canis_familiaris
ENSCHIG00000001799	-	100	93.798	ENSCAFG00020017123	STAU1	100	93.798	Canis_lupus_dingo
ENSCHIG00000001799	-	100	92.721	ENSTSYG00000036179	-	100	92.721	Carlito_syrichta
ENSCHIG00000001799	-	100	85.132	ENSCAPG00000017041	STAU1	100	91.734	Cavia_aperea
ENSCHIG00000001799	-	100	84.040	ENSCPOG00000005566	STAU1	100	90.303	Cavia_porcellus
ENSCHIG00000001799	-	100	94.511	ENSCCAG00000034339	STAU1	100	94.511	Cebus_capucinus
ENSCHIG00000001799	-	100	95.321	ENSCATG00000028474	STAU1	100	95.321	Cercocebus_atys
ENSCHIG00000001799	-	100	87.475	ENSCLAG00000006516	-	100	93.737	Chinchilla_lanigera
ENSCHIG00000001799	-	100	72.577	ENSCLAG00000002784	-	100	77.309	Chinchilla_lanigera
ENSCHIG00000001799	-	100	87.221	ENSCSAG00000014986	STAU1	100	94.556	Chlorocebus_sabaeus
ENSCHIG00000001799	-	100	95.329	ENSCHOG00000001511	STAU1	100	95.329	Choloepus_hoffmanni
ENSCHIG00000001799	-	99	86.523	ENSCPBG00000026741	STAU1	96	86.523	Chrysemys_picta_bellii
ENSCHIG00000001799	-	100	95.147	ENSCANG00000039220	STAU1	100	95.147	Colobus_angolensis_palliatus
ENSCHIG00000001799	-	100	82.424	ENSCGRG00001013453	Stau1	100	88.283	Cricetulus_griseus_chok1gshd
ENSCHIG00000001799	-	100	82.424	ENSCGRG00000007216	Stau1	100	88.283	Cricetulus_griseus_crigri
ENSCHIG00000001799	-	99	64.662	ENSCSEG00000000792	stau1	74	65.291	Cynoglossus_semilaevis
ENSCHIG00000001799	-	99	68.056	ENSCVAG00000005906	stau1	99	68.631	Cyprinodon_variegatus
ENSCHIG00000001799	-	99	72.374	ENSDARG00000044182	stau1	96	72.374	Danio_rerio
ENSCHIG00000001799	-	100	94.983	ENSDNOG00000014933	STAU1	98	94.983	Dasypus_novemcinctus
ENSCHIG00000001799	-	100	83.030	ENSDORG00000030220	Stau1	100	89.980	Dipodomys_ordii
ENSCHIG00000001799	-	88	94.581	ENSETEG00000018235	STAU1	88	94.581	Echinops_telfairi
ENSCHIG00000001799	-	100	95.517	ENSEASG00005023343	STAU1	100	95.517	Equus_asinus_asinus
ENSCHIG00000001799	-	100	96.534	ENSECAG00000012894	STAU1	100	96.534	Equus_caballus
ENSCHIG00000001799	-	90	98.529	ENSEEUG00000014344	STAU1	80	98.529	Erinaceus_europaeus
ENSCHIG00000001799	-	95	70.787	ENSELUG00000002529	stau1	93	69.780	Esox_lucius
ENSCHIG00000001799	-	100	96.014	ENSFCAG00000001447	STAU1	100	96.014	Felis_catus
ENSCHIG00000001799	-	99	86.759	ENSFALG00000012940	STAU1	96	86.759	Ficedula_albicollis
ENSCHIG00000001799	-	99	66.180	ENSFDAG00000020837	-	100	70.565	Fukomys_damarensis
ENSCHIG00000001799	-	100	86.667	ENSFDAG00000014119	-	100	92.727	Fukomys_damarensis
ENSCHIG00000001799	-	99	72.211	ENSFHEG00000013517	stau1	96	72.211	Fundulus_heteroclitus
ENSCHIG00000001799	-	99	56.530	ENSGMOG00000016850	stau1	96	60.469	Gadus_morhua
ENSCHIG00000001799	-	99	88.340	ENSGALG00000004736	STAU1	96	88.340	Gallus_gallus
ENSCHIG00000001799	-	95	73.190	ENSGAFG00000010437	stau1	96	73.190	Gambusia_affinis
ENSCHIG00000001799	-	99	71.538	ENSGACG00000001352	stau1	96	70.019	Gasterosteus_aculeatus
ENSCHIG00000001799	-	99	87.154	ENSGAGG00000009825	STAU1	96	87.154	Gopherus_agassizii
ENSCHIG00000001799	-	100	89.249	ENSGGOG00000025351	STAU1	100	93.973	Gorilla_gorilla
ENSCHIG00000001799	-	99	72.427	ENSHBUG00000023668	stau1	96	72.427	Haplochromis_burtoni
ENSCHIG00000001799	-	100	87.018	ENSHGLG00000008730	STAU1	100	94.479	Heterocephalus_glaber_female
ENSCHIG00000001799	-	100	87.071	ENSHGLG00100000098	STAU1	100	94.479	Heterocephalus_glaber_male
ENSCHIG00000001799	-	99	64.706	ENSHCOG00000018461	stau1	92	68.097	Hippocampus_comes
ENSCHIG00000001799	-	94	73.292	ENSIPUG00000023725	stau1	95	73.292	Ictalurus_punctatus
ENSCHIG00000001799	-	100	85.801	ENSSTOG00000003634	STAU1	100	93.456	Ictidomys_tridecemlineatus
ENSCHIG00000001799	-	100	84.381	ENSJJAG00000020032	Stau1	100	91.616	Jaculus_jaculus
ENSCHIG00000001799	-	95	71.316	ENSKMAG00000007135	stau1	93	71.961	Kryptolebias_marmoratus
ENSCHIG00000001799	-	99	69.501	ENSLBEG00000020172	stau1	96	69.501	Labrus_bergylta
ENSCHIG00000001799	-	99	82.157	ENSLACG00000016157	STAU1	96	82.157	Latimeria_chalumnae
ENSCHIG00000001799	-	99	77.462	ENSLOCG00000003134	stau1	96	76.636	Lepisosteus_oculatus
ENSCHIG00000001799	-	100	86.410	ENSLAFG00000003238	STAU1	100	94.303	Loxodonta_africana
ENSCHIG00000001799	-	100	95.321	ENSMFAG00000040931	STAU1	100	95.321	Macaca_fascicularis
ENSCHIG00000001799	-	100	89.420	ENSMMUG00000002302	STAU1	100	95.221	Macaca_mulatta
ENSCHIG00000001799	-	100	95.321	ENSMNEG00000033821	STAU1	100	95.321	Macaca_nemestrina
ENSCHIG00000001799	-	100	95.147	ENSMLEG00000031383	STAU1	100	95.147	Mandrillus_leucophaeus
ENSCHIG00000001799	-	99	72.348	ENSMAMG00000017586	stau1	99	72.348	Mastacembelus_armatus
ENSCHIG00000001799	-	99	69.944	ENSMZEG00005015605	stau1	96	69.944	Maylandia_zebra
ENSCHIG00000001799	-	99	87.084	ENSMGAG00000004719	STAU1	94	87.084	Meleagris_gallopavo
ENSCHIG00000001799	-	100	83.232	ENSMAUG00000013846	Stau1	100	89.091	Mesocricetus_auratus
ENSCHIG00000001799	-	100	93.482	ENSMICG00000001995	STAU1	100	93.482	Microcebus_murinus
ENSCHIG00000001799	-	100	83.434	ENSMOCG00000018743	Stau1	100	89.697	Microtus_ochrogaster
ENSCHIG00000001799	-	100	66.939	ENSMMOG00000015455	stau1	99	72.490	Mola_mola
ENSCHIG00000001799	-	99	91.552	ENSMODG00000016276	STAU1	99	91.552	Monodelphis_domestica
ENSCHIG00000001799	-	99	71.992	ENSMALG00000000045	stau1	96	71.642	Monopterus_albus
ENSCHIG00000001799	-	100	82.892	MGP_CAROLIEiJ_G0024699	Stau1	100	89.571	Mus_caroli
ENSCHIG00000001799	-	100	82.892	ENSMUSG00000039536	Stau1	100	89.366	Mus_musculus
ENSCHIG00000001799	-	100	82.485	MGP_PahariEiJ_G0026141	Stau1	100	89.571	Mus_pahari
ENSCHIG00000001799	-	100	82.485	MGP_SPRETEiJ_G0025619	Stau1	100	88.957	Mus_spretus
ENSCHIG00000001799	-	99	94.653	ENSMPUG00000017581	STAU1	99	94.653	Mustela_putorius_furo
ENSCHIG00000001799	-	100	94.454	ENSMLUG00000008407	STAU1	98	94.454	Myotis_lucifugus
ENSCHIG00000001799	-	100	85.657	ENSNGAG00000007108	Stau1	100	92.121	Nannospalax_galili
ENSCHIG00000001799	-	99	72.427	ENSNBRG00000017596	stau1	96	72.427	Neolamprologus_brichardi
ENSCHIG00000001799	-	100	94.801	ENSNLEG00000006955	STAU1	100	94.801	Nomascus_leucogenys
ENSCHIG00000001799	-	99	84.642	ENSMEUG00000003263	STAU1	99	84.642	Notamacropus_eugenii
ENSCHIG00000001799	-	99	86.888	ENSOPRG00000014569	STAU1	100	86.888	Ochotona_princeps
ENSCHIG00000001799	-	100	87.576	ENSODEG00000006523	STAU1	100	94.355	Octodon_degus
ENSCHIG00000001799	-	99	73.010	ENSONIG00000004152	stau1	95	73.010	Oreochromis_niloticus
ENSCHIG00000001799	-	99	87.695	ENSOANG00000006394	STAU1	96	87.695	Ornithorhynchus_anatinus
ENSCHIG00000001799	-	100	92.201	ENSOCUG00000006214	STAU1	100	92.201	Oryctolagus_cuniculus
ENSCHIG00000001799	-	99	69.288	ENSOMEG00000002388	stau1	96	69.288	Oryzias_melastigma
ENSCHIG00000001799	-	100	61.323	ENSOGAG00000028222	-	99	63.911	Otolemur_garnettii
ENSCHIG00000001799	-	100	94.281	ENSOGAG00000002127	STAU1	98	94.281	Otolemur_garnettii
ENSCHIG00000001799	-	100	100.000	ENSOARG00000012204	STAU1	100	100.000	Ovis_aries
ENSCHIG00000001799	-	100	89.420	ENSPPAG00000032023	STAU1	100	93.973	Pan_paniscus
ENSCHIG00000001799	-	100	95.841	ENSPPRG00000003436	STAU1	100	95.841	Panthera_pardus
ENSCHIG00000001799	-	100	95.841	ENSPTIG00000011768	STAU1	100	95.841	Panthera_tigris_altaica
ENSCHIG00000001799	-	100	89.420	ENSPTRG00000023130	STAU1	100	93.973	Pan_troglodytes
ENSCHIG00000001799	-	100	95.321	ENSPANG00000020560	STAU1	100	95.321	Papio_anubis
ENSCHIG00000001799	-	95	71.963	ENSPKIG00000024588	stau1	93	71.614	Paramormyrops_kingsleyae
ENSCHIG00000001799	-	99	87.154	ENSPSIG00000010731	STAU1	95	87.154	Pelodiscus_sinensis
ENSCHIG00000001799	-	99	73.828	ENSPMGG00000018553	stau1	99	71.457	Periophthalmus_magnuspinnatus
ENSCHIG00000001799	-	100	82.626	ENSPEMG00000022045	Stau1	100	88.889	Peromyscus_maniculatus_bairdii
ENSCHIG00000001799	-	100	91.033	ENSPCIG00000023269	STAU1	100	91.033	Phascolarctos_cinereus
ENSCHIG00000001799	-	99	73.242	ENSPFOG00000017253	stau1	96	73.242	Poecilia_formosa
ENSCHIG00000001799	-	56	68.405	ENSPLAG00000014829	stau1	81	69.939	Poecilia_latipinna
ENSCHIG00000001799	-	94	72.500	ENSPMEG00000007495	stau1	94	72.500	Poecilia_mexicana
ENSCHIG00000001799	-	99	72.656	ENSPREG00000003477	stau1	96	72.656	Poecilia_reticulata
ENSCHIG00000001799	-	100	94.801	ENSPPYG00000011111	STAU1	100	94.801	Pongo_abelii
ENSCHIG00000001799	-	94	88.051	ENSPCAG00000002459	STAU1	100	88.051	Procavia_capensis
ENSCHIG00000001799	-	100	94.107	ENSPCOG00000027746	STAU1	100	94.107	Propithecus_coquereli
ENSCHIG00000001799	-	86	95.918	ENSPVAG00000015019	STAU1	86	95.918	Pteropus_vampyrus
ENSCHIG00000001799	-	99	72.427	ENSPNYG00000014436	stau1	96	72.427	Pundamilia_nyererei
ENSCHIG00000001799	-	99	71.567	ENSPNAG00000011323	stau1	96	71.760	Pygocentrus_nattereri
ENSCHIG00000001799	-	100	82.828	ENSRNOG00000007781	Stau1	100	89.091	Rattus_norvegicus
ENSCHIG00000001799	-	100	87.475	ENSRBIG00000037345	STAU1	100	93.952	Rhinopithecus_bieti
ENSCHIG00000001799	-	100	95.321	ENSRROG00000039008	STAU1	100	95.321	Rhinopithecus_roxellana
ENSCHIG00000001799	-	100	94.511	ENSSBOG00000034448	STAU1	100	94.511	Saimiri_boliviensis_boliviensis
ENSCHIG00000001799	-	99	91.972	ENSSHAG00000009492	STAU1	97	91.972	Sarcophilus_harrisii
ENSCHIG00000001799	-	95	74.621	ENSSFOG00015021497	stau1	99	69.783	Scleropages_formosus
ENSCHIG00000001799	-	99	70.896	ENSSMAG00000017410	stau1	96	70.896	Scophthalmus_maximus
ENSCHIG00000001799	-	99	71.828	ENSSDUG00000019439	stau1	93	71.828	Seriola_dumerili
ENSCHIG00000001799	-	99	67.944	ENSSLDG00000025040	stau1	93	71.828	Seriola_lalandi_dorsalis
ENSCHIG00000001799	-	64	92.549	ENSSARG00000010389	-	64	92.549	Sorex_araneus
ENSCHIG00000001799	-	99	85.938	ENSSPUG00000017983	STAU1	100	85.910	Sphenodon_punctatus
ENSCHIG00000001799	-	95	71.455	ENSSPAG00000019275	stau1	93	71.455	Stegastes_partitus
ENSCHIG00000001799	-	100	97.227	ENSSSCG00000027444	STAU1	100	97.227	Sus_scrofa
ENSCHIG00000001799	-	99	86.328	ENSTGUG00000008784	STAU1	93	86.328	Taeniopygia_guttata
ENSCHIG00000001799	-	95	73.725	ENSTRUG00000005837	stau1	93	74.510	Takifugu_rubripes
ENSCHIG00000001799	-	94	71.731	ENSTNIG00000014732	stau1	77	71.731	Tetraodon_nigroviridis
ENSCHIG00000001799	-	100	82.353	ENSTBEG00000009404	STAU1	100	82.353	Tupaia_belangeri
ENSCHIG00000001799	-	100	86.308	ENSTTRG00000004285	STAU1	100	86.308	Tursiops_truncatus
ENSCHIG00000001799	-	100	87.097	ENSUAMG00000025449	STAU1	100	93.439	Ursus_americanus
ENSCHIG00000001799	-	74	83.827	ENSUMAG00000024475	STAU1	89	92.328	Ursus_maritimus
ENSCHIG00000001799	-	100	96.534	ENSVPAG00000001313	STAU1	100	96.534	Vicugna_pacos
ENSCHIG00000001799	-	100	93.992	ENSVVUG00000022325	STAU1	100	93.992	Vulpes_vulpes
ENSCHIG00000001799	-	99	81.262	ENSXETG00000001783	stau1	96	81.460	Xenopus_tropicalis
ENSCHIG00000001799	-	53	65.287	ENSXCOG00000008804	stau1	83	65.152	Xiphophorus_couchianus
ENSCHIG00000001799	-	99	73.190	ENSXMAG00000016175	stau1	96	73.190	Xiphophorus_maculatus