EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000003253 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 1002 bases
Position: chrLWLT01000021.1:3154500-3155501
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000001595	tRNA_anti-codon	PF01336.25	1.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000004438	-	1002	-	ENSCHIP00000001595	333 (aa)	-	UPI000D192C15

Gene Model

Click here to download ENSCHIG00000003253's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000003253's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000003253	-	98	86.216	ENSCHIG00000019425	-	100	83.784

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000003253	-	98	72.507	ENSG00000107960	STN1	100	69.293	Homo_sapiens
ENSCHIG00000003253	-	100	68.170	ENSAMEG00000017971	STN1	99	67.374	Ailuropoda_melanoleuca
ENSCHIG00000003253	-	98	50.135	ENSAPLG00000006661	STN1	100	48.780	Anas_platyrhynchos
ENSCHIG00000003253	-	98	43.169	ENSACAG00000004954	STN1	100	42.077	Anolis_carolinensis
ENSCHIG00000003253	-	98	71.467	ENSANAG00000038147	STN1	100	69.565	Aotus_nancymaae
ENSCHIG00000003253	-	100	85.638	ENSBTAG00000015019	STN1	100	82.973	Bos_taurus
ENSCHIG00000003253	-	98	73.585	ENSCJAG00000040388	STN1	100	72.011	Callithrix_jacchus
ENSCHIG00000003253	-	98	68.984	ENSCAFG00000010483	STN1	100	68.464	Canis_familiaris
ENSCHIG00000003253	-	98	68.464	ENSCAFG00020010650	STN1	100	68.464	Canis_lupus_dingo
ENSCHIG00000003253	-	85	64.615	ENSCAPG00000016278	STN1	100	64.615	Cavia_aperea
ENSCHIG00000003253	-	100	66.223	ENSCPOG00000006273	STN1	99	65.426	Cavia_porcellus
ENSCHIG00000003253	-	98	71.739	ENSCCAG00000020507	STN1	100	70.109	Cebus_capucinus
ENSCHIG00000003253	-	98	70.652	ENSCATG00000043103	STN1	100	70.652	Cercocebus_atys
ENSCHIG00000003253	-	100	67.287	ENSCLAG00000001617	STN1	99	64.362	Chinchilla_lanigera
ENSCHIG00000003253	-	98	71.429	ENSCSAG00000005318	STN1	100	70.380	Chlorocebus_sabaeus
ENSCHIG00000003253	-	98	54.620	ENSCPBG00000024481	STN1	100	54.620	Chrysemys_picta_bellii
ENSCHIG00000003253	-	98	71.698	ENSCANG00000029004	STN1	100	70.652	Colobus_angolensis_palliatus
ENSCHIG00000003253	-	99	59.184	ENSCGRG00001023175	Stn1	99	58.309	Cricetulus_griseus_chok1gshd
ENSCHIG00000003253	-	99	61.968	ENSCGRG00000004324	Stn1	99	61.170	Cricetulus_griseus_crigri
ENSCHIG00000003253	-	95	43.370	ENSDARG00000007734	stn1	96	43.370	Danio_rerio
ENSCHIG00000003253	-	83	67.398	ENSDNOG00000011022	STN1	99	66.771	Dasypus_novemcinctus
ENSCHIG00000003253	-	94	66.854	ENSDORG00000005994	Stn1	100	66.396	Dipodomys_ordii
ENSCHIG00000003253	-	98	62.097	ENSETEG00000013967	STN1	100	60.705	Echinops_telfairi
ENSCHIG00000003253	-	98	74.933	ENSEASG00005015134	STN1	100	74.933	Equus_asinus_asinus
ENSCHIG00000003253	-	98	74.394	ENSECAG00000023477	STN1	100	74.394	Equus_caballus
ENSCHIG00000003253	-	94	70.904	ENSFCAG00000030378	STN1	100	68.478	Felis_catus
ENSCHIG00000003253	-	98	50.136	ENSFALG00000008791	STN1	100	48.919	Ficedula_albicollis
ENSCHIG00000003253	-	100	64.096	ENSFDAG00000007528	STN1	99	61.436	Fukomys_damarensis
ENSCHIG00000003253	-	98	50.678	ENSGALG00000008304	STN1	100	49.596	Gallus_gallus
ENSCHIG00000003253	-	81	57.407	ENSGAGG00000003673	STN1	82	57.407	Gopherus_agassizii
ENSCHIG00000003253	-	98	72.776	ENSGGOG00000008979	STN1	100	69.565	Gorilla_gorilla
ENSCHIG00000003253	-	100	67.021	ENSHGLG00000002775	OBFC1	99	64.096	Heterocephalus_glaber_female
ENSCHIG00000003253	-	100	67.021	ENSHGLG00100012701	STN1	99	64.628	Heterocephalus_glaber_male
ENSCHIG00000003253	-	95	36.723	ENSHCOG00000002048	stn1	98	36.723	Hippocampus_comes
ENSCHIG00000003253	-	100	66.667	ENSSTOG00000011905	STN1	99	66.667	Ictidomys_tridecemlineatus
ENSCHIG00000003253	-	100	60.847	ENSJJAG00000020389	Stn1	99	58.886	Jaculus_jaculus
ENSCHIG00000003253	-	98	42.246	ENSLACG00000012381	STN1	100	42.246	Latimeria_chalumnae
ENSCHIG00000003253	-	100	70.604	ENSLAFG00000004232	STN1	99	68.241	Loxodonta_africana
ENSCHIG00000003253	-	98	71.429	ENSMFAG00000041817	STN1	100	70.380	Macaca_fascicularis
ENSCHIG00000003253	-	98	71.429	ENSMMUG00000015323	STN1	100	70.380	Macaca_mulatta
ENSCHIG00000003253	-	98	70.380	ENSMNEG00000031906	STN1	100	70.380	Macaca_nemestrina
ENSCHIG00000003253	-	98	70.652	ENSMLEG00000040619	STN1	100	70.652	Mandrillus_leucophaeus
ENSCHIG00000003253	-	98	49.866	ENSMGAG00000010550	STN1	98	48.800	Meleagris_gallopavo
ENSCHIG00000003253	-	99	63.298	ENSMAUG00000015671	Stn1	99	62.766	Mesocricetus_auratus
ENSCHIG00000003253	-	98	69.377	ENSMICG00000012547	STN1	100	69.648	Microcebus_murinus
ENSCHIG00000003253	-	100	57.568	ENSMOCG00000009637	Stn1	99	57.320	Microtus_ochrogaster
ENSCHIG00000003253	-	98	62.228	ENSMODG00000011003	STN1	100	60.870	Monodelphis_domestica
ENSCHIG00000003253	-	100	61.008	MGP_CAROLIEiJ_G0023057	Stn1	99	60.477	Mus_caroli
ENSCHIG00000003253	-	100	59.682	ENSMUSG00000042694	Stn1	99	59.151	Mus_musculus
ENSCHIG00000003253	-	100	60.477	MGP_PahariEiJ_G0014547	Stn1	99	59.947	Mus_pahari
ENSCHIG00000003253	-	100	59.416	MGP_SPRETEiJ_G0023978	Stn1	99	58.886	Mus_spretus
ENSCHIG00000003253	-	98	69.589	ENSMPUG00000016800	STN1	100	69.041	Mustela_putorius_furo
ENSCHIG00000003253	-	100	73.753	ENSMLUG00000002037	STN1	99	72.441	Myotis_lucifugus
ENSCHIG00000003253	-	100	66.578	ENSNGAG00000023986	Stn1	99	65.252	Nannospalax_galili
ENSCHIG00000003253	-	98	72.237	ENSNLEG00000015282	STN1	100	69.022	Nomascus_leucogenys
ENSCHIG00000003253	-	98	62.264	ENSOPRG00000010707	STN1	100	61.518	Ochotona_princeps
ENSCHIG00000003253	-	99	63.003	ENSODEG00000007270	STN1	99	62.466	Octodon_degus
ENSCHIG00000003253	-	95	58.287	ENSOANG00000001628	STN1	98	56.630	Ornithorhynchus_anatinus
ENSCHIG00000003253	-	100	68.883	ENSOCUG00000003028	STN1	99	68.883	Oryctolagus_cuniculus
ENSCHIG00000003253	-	95	38.810	ENSORLG00000002353	stn1	99	38.810	Oryzias_latipes
ENSCHIG00000003253	-	95	40.056	ENSORLG00020012935	stn1	98	40.056	Oryzias_latipes_hni
ENSCHIG00000003253	-	95	38.527	ENSORLG00015012154	stn1	98	38.527	Oryzias_latipes_hsok
ENSCHIG00000003253	-	100	68.602	ENSOGAG00000008722	STN1	99	65.699	Otolemur_garnettii
ENSCHIG00000003253	-	100	85.263	ENSOARG00000004883	STN1	99	81.842	Ovis_aries
ENSCHIG00000003253	-	98	72.776	ENSPPAG00000030947	STN1	100	69.565	Pan_paniscus
ENSCHIG00000003253	-	94	71.186	ENSPPRG00000010476	STN1	100	68.750	Panthera_pardus
ENSCHIG00000003253	-	94	70.195	ENSPTIG00000017333	STN1	100	67.024	Panthera_tigris_altaica
ENSCHIG00000003253	-	98	72.776	ENSPTRG00000002919	STN1	100	69.565	Pan_troglodytes
ENSCHIG00000003253	-	98	71.429	ENSPANG00000020926	STN1	100	70.380	Papio_anubis
ENSCHIG00000003253	-	97	37.466	ENSPKIG00000000721	stn1	98	37.736	Paramormyrops_kingsleyae
ENSCHIG00000003253	-	98	51.491	ENSPSIG00000010802	STN1	100	51.491	Pelodiscus_sinensis
ENSCHIG00000003253	-	100	62.169	ENSPEMG00000013944	Stn1	99	61.640	Peromyscus_maniculatus_bairdii
ENSCHIG00000003253	-	98	60.705	ENSPCIG00000024497	STN1	100	59.350	Phascolarctos_cinereus
ENSCHIG00000003253	-	98	71.968	ENSPPYG00000002628	STN1	100	68.750	Pongo_abelii
ENSCHIG00000003253	-	98	71.274	ENSPCOG00000017648	STN1	100	71.274	Propithecus_coquereli
ENSCHIG00000003253	-	98	72.973	ENSPVAG00000004187	STN1	100	72.011	Pteropus_vampyrus
ENSCHIG00000003253	-	100	60.372	ENSRNOG00000020376	Stn1	99	59.840	Rattus_norvegicus
ENSCHIG00000003253	-	98	71.698	ENSRBIG00000039819	STN1	100	70.652	Rhinopithecus_bieti
ENSCHIG00000003253	-	98	71.698	ENSRROG00000013903	STN1	100	70.652	Rhinopithecus_roxellana
ENSCHIG00000003253	-	98	72.283	ENSSBOG00000031516	STN1	100	70.380	Saimiri_boliviensis_boliviensis
ENSCHIG00000003253	-	98	58.537	ENSSHAG00000017550	STN1	100	57.182	Sarcophilus_harrisii
ENSCHIG00000003253	-	96	41.622	ENSSFOG00015004107	stn1	99	41.622	Scleropages_formosus
ENSCHIG00000003253	-	99	83.483	ENSSSCG00000010605	STN1	84	83.483	Sus_scrofa
ENSCHIG00000003253	-	98	49.598	ENSTGUG00000010354	STN1	100	49.062	Taeniopygia_guttata
ENSCHIG00000003253	-	98	39.459	ENSTNIG00000014162	stn1	98	38.649	Tetraodon_nigroviridis
ENSCHIG00000003253	-	73	80.392	ENSTBEG00000000659	STN1	66	80.392	Tupaia_belangeri
ENSCHIG00000003253	-	98	76.216	ENSTTRG00000003375	STN1	100	74.728	Tursiops_truncatus
ENSCHIG00000003253	-	98	67.429	ENSUMAG00000023647	STN1	100	66.571	Ursus_maritimus
ENSCHIG00000003253	-	98	75.676	ENSVPAG00000002530	STN1	100	74.185	Vicugna_pacos
ENSCHIG00000003253	-	100	69.496	ENSVVUG00000004636	-	61	68.170	Vulpes_vulpes
ENSCHIG00000003253	-	94	45.000	ENSXETG00000011402	STN1	98	44.568	Xenopus_tropicalis