EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000003401 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 3330 bases
Position: chr3:111314962-111318291
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000001669	RRM_1	PF00076.22	7.5e-33	1	3
ENSCHIP00000001669	RRM_1	PF00076.22	7.5e-33	2	3
ENSCHIP00000001669	RRM_1	PF00076.22	7.5e-33	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000004624	-	1227	-	ENSCHIP00000001669	408 (aa)	-	UPI000D196E13

Gene Model

Click here to download ENSCHIG00000003401's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000003401's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000003401	-	79	76.991	ENSCHIG00000010894	-	53	77.358
ENSCHIG00000003401	-	91	68.526	ENSCHIG00000026149	-	57	68.675
ENSCHIG00000003401	-	89	66.286	ENSCHIG00000012665	-	63	63.351
ENSCHIG00000003401	-	89	61.504	ENSCHIG00000012143	-	53	57.430
ENSCHIG00000003401	-	85	79.646	ENSCHIG00000021052	-	89	68.558

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000003401	-	51	50.679	ENSACIG00000013234	ncl	75	50.917	Amphilophus_citrinellus
ENSCHIG00000003401	-	52	35.833	ENSATEG00000019862	-	53	35.714	Anabas_testudineus
ENSCHIG00000003401	-	52	56.769	ENSAPLG00000012897	-	54	53.150	Anas_platyrhynchos
ENSCHIG00000003401	-	87	57.333	ENSACAG00000001006	-	62	57.848	Anolis_carolinensis
ENSCHIG00000003401	-	52	47.321	ENSACLG00000026031	ncl	83	48.858	Astatotilapia_calliptera
ENSCHIG00000003401	-	53	46.491	ENSAMXG00000001647	ncl	70	46.552	Astyanax_mexicanus
ENSCHIG00000003401	-	52	50.649	ENSDARG00000002710	ncl	79	51.786	Danio_rerio
ENSCHIG00000003401	-	52	44.000	ENSELUG00000022826	-	69	43.805	Esox_lucius
ENSCHIG00000003401	-	52	46.222	ENSFHEG00000018000	ncl	54	47.511	Fundulus_heteroclitus
ENSCHIG00000003401	-	52	49.107	ENSIPUG00000024556	ncl	85	49.321	Ictalurus_punctatus
ENSCHIG00000003401	-	50	36.245	ENSLBEG00000014278	-	59	36.564	Labrus_bergylta
ENSCHIG00000003401	-	51	45.982	ENSLACG00000022167	-	67	45.982	Latimeria_chalumnae
ENSCHIG00000003401	-	52	56.332	ENSMGAG00000008147	-	78	58.454	Meleagris_gallopavo
ENSCHIG00000003401	-	52	48.444	ENSMMOG00000008553	ncl	82	49.099	Mola_mola
ENSCHIG00000003401	-	85	61.538	ENSMODG00000002470	-	52	62.069	Monodelphis_domestica
ENSCHIG00000003401	-	75	77.551	ENSMPUG00000001663	-	56	78.351	Mustela_putorius_furo
ENSCHIG00000003401	-	52	49.107	ENSNBRG00000001232	ncl	73	49.321	Neolamprologus_brichardi
ENSCHIG00000003401	-	52	49.107	ENSNBRG00000000146	-	77	49.321	Neolamprologus_brichardi
ENSCHIG00000003401	-	50	31.390	ENSONIG00000010631	-	56	30.317	Oreochromis_niloticus
ENSCHIG00000003401	-	52	61.905	ENSOANG00000008732	-	66	58.268	Ornithorhynchus_anatinus
ENSCHIG00000003401	-	54	47.748	ENSORLG00015013815	ncl	85	49.107	Oryzias_latipes_hsok
ENSCHIG00000003401	-	54	31.765	ENSOMEG00000015864	-	54	32.677	Oryzias_melastigma
ENSCHIG00000003401	-	52	49.345	ENSPMGG00000004709	ncl	82	49.345	Periophthalmus_magnuspinnatus
ENSCHIG00000003401	-	85	59.829	ENSPCIG00000003293	-	55	60.000	Phascolarctos_cinereus
ENSCHIG00000003401	-	69	53.175	ENSSHAG00000007489	-	61	62.044	Sarcophilus_harrisii
ENSCHIG00000003401	-	52	51.515	ENSSFOG00015008583	ncl	50	51.528	Scleropages_formosus
ENSCHIG00000003401	-	52	37.168	ENSSFOG00015013153	-	63	37.500	Scleropages_formosus
ENSCHIG00000003401	-	52	49.333	ENSSDUG00000006128	ncl	73	49.550	Seriola_dumerili
ENSCHIG00000003401	-	50	56.540	ENSSPUG00000008244	-	54	52.222	Sphenodon_punctatus
ENSCHIG00000003401	-	52	49.115	ENSSPAG00000002637	ncl	73	49.107	Stegastes_partitus
ENSCHIG00000003401	-	52	55.066	ENSTGUG00000009782	-	50	51.181	Taeniopygia_guttata
ENSCHIG00000003401	-	52	47.845	ENSTNIG00000012186	ncl	54	45.349	Tetraodon_nigroviridis
ENSCHIG00000003401	-	51	34.050	ENSXCOG00000003524	ncl	83	34.940	Xiphophorus_couchianus