EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000003491 (Gene tree)
Gene ID: 102186097
Gene Symbol: TNRC6B
Alias: KIAA1093
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 155963 bases
Position: chr5:110420885-110576847
Accession: 102186097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000001823	Ago_hook	PF10427.9	9.5e-20	1	1
ENSCHIP00000001800	Ago_hook	PF10427.9	1.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000005102	TNRC6B-202	5292	-	ENSCHIP00000001823	1763 (aa)	-	UPI000D191FF2
ENSCHIT00000005017	TNRC6B-201	5964	XM_013964362	ENSCHIP00000001800	1792 (aa)	XP_013819816	UPI000846F34F

Gene Model

Click here to download ENSCHIG00000003491's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000003491's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000003491	TNRC6B	99	34.532	ENSCHIG00000026004	TNRC6C	99	35.495
ENSCHIG00000003491	TNRC6B	99	37.519	ENSCHIG00000019448	TNRC6A	94	36.468

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000003491	TNRC6B	99	93.047	ENSG00000100354	TNRC6B	98	98.193	Homo_sapiens
ENSCHIG00000003491	TNRC6B	100	92.112	ENSAMEG00000011025	TNRC6B	100	90.963	Ailuropoda_melanoleuca
ENSCHIG00000003491	TNRC6B	98	82.406	ENSAPLG00000009347	TNRC6B	100	83.533	Anas_platyrhynchos
ENSCHIG00000003491	TNRC6B	99	73.049	ENSACAG00000007281	TNRC6B	99	73.161	Anolis_carolinensis
ENSCHIG00000003491	TNRC6B	99	95.127	ENSANAG00000035042	TNRC6B	98	98.193	Aotus_nancymaae
ENSCHIG00000003491	TNRC6B	52	47.755	ENSAMXG00000008707	tnrc6b	82	46.830	Astyanax_mexicanus
ENSCHIG00000003491	TNRC6B	99	98.651	ENSBTAG00000021076	TNRC6B	99	98.651	Bos_taurus
ENSCHIG00000003491	TNRC6B	99	95.442	ENSCJAG00000002732	TNRC6B	99	99.718	Callithrix_jacchus
ENSCHIG00000003491	TNRC6B	96	96.992	ENSCAFG00000001255	TNRC6B	100	94.101	Canis_familiaris
ENSCHIG00000003491	TNRC6B	100	96.435	ENSCAFG00020002189	TNRC6B	99	96.435	Canis_lupus_dingo
ENSCHIG00000003491	TNRC6B	99	95.173	ENSTSYG00000011836	TNRC6B	100	95.408	Carlito_syrichta
ENSCHIG00000003491	TNRC6B	100	94.549	ENSCPOG00000005705	TNRC6B	99	94.383	Cavia_porcellus
ENSCHIG00000003491	TNRC6B	99	94.692	ENSCCAG00000019912	TNRC6B	98	98.193	Cebus_capucinus
ENSCHIG00000003491	TNRC6B	99	95.483	ENSCATG00000029291	TNRC6B	98	98.193	Cercocebus_atys
ENSCHIG00000003491	TNRC6B	100	94.655	ENSCLAG00000016942	TNRC6B	99	94.376	Chinchilla_lanigera
ENSCHIG00000003491	TNRC6B	99	92.203	ENSCSAG00000006021	TNRC6B	99	91.921	Chlorocebus_sabaeus
ENSCHIG00000003491	TNRC6B	91	85.417	ENSCPBG00000022932	TNRC6B	99	85.000	Chrysemys_picta_bellii
ENSCHIG00000003491	TNRC6B	98	95.468	ENSCANG00000030776	TNRC6B	98	98.193	Colobus_angolensis_palliatus
ENSCHIG00000003491	TNRC6B	96	94.448	ENSCGRG00001020166	Tnrc6b	98	93.869	Cricetulus_griseus_chok1gshd
ENSCHIG00000003491	TNRC6B	100	94.543	ENSCGRG00000016696	Tnrc6b	99	93.902	Cricetulus_griseus_crigri
ENSCHIG00000003491	TNRC6B	100	94.599	ENSDNOG00000012744	TNRC6B	100	94.488	Dasypus_novemcinctus
ENSCHIG00000003491	TNRC6B	100	95.541	ENSDORG00000003386	Tnrc6b	99	95.206	Dipodomys_ordii
ENSCHIG00000003491	TNRC6B	98	83.343	ENSETEG00000006570	TNRC6B	99	84.698	Echinops_telfairi
ENSCHIG00000003491	TNRC6B	100	96.823	ENSEASG00005005306	TNRC6B	99	96.823	Equus_asinus_asinus
ENSCHIG00000003491	TNRC6B	100	97.436	ENSECAG00000009759	TNRC6B	100	100.000	Equus_caballus
ENSCHIG00000003491	TNRC6B	58	97.802	ENSEEUG00000008690	-	59	97.802	Erinaceus_europaeus
ENSCHIG00000003491	TNRC6B	100	96.997	ENSFCAG00000004791	TNRC6B	99	96.997	Felis_catus
ENSCHIG00000003491	TNRC6B	96	87.581	ENSFALG00000012195	TNRC6B	100	87.169	Ficedula_albicollis
ENSCHIG00000003491	TNRC6B	100	95.209	ENSFDAG00000021368	TNRC6B	99	94.875	Fukomys_damarensis
ENSCHIG00000003491	TNRC6B	99	88.381	ENSGALG00000012050	TNRC6B	97	87.817	Gallus_gallus
ENSCHIG00000003491	TNRC6B	99	87.296	ENSGAGG00000025188	TNRC6B	98	86.959	Gopherus_agassizii
ENSCHIG00000003491	TNRC6B	99	95.657	ENSGGOG00000008444	TNRC6B	98	98.193	Gorilla_gorilla
ENSCHIG00000003491	TNRC6B	100	95.164	ENSHGLG00000009306	TNRC6B	99	94.608	Heterocephalus_glaber_female
ENSCHIG00000003491	TNRC6B	100	95.151	ENSHGLG00100018108	TNRC6B	99	94.705	Heterocephalus_glaber_male
ENSCHIG00000003491	TNRC6B	81	44.868	ENSIPUG00000001515	tnrc6b	95	44.958	Ictalurus_punctatus
ENSCHIG00000003491	TNRC6B	100	95.708	ENSSTOG00000008927	TNRC6B	99	95.429	Ictidomys_tridecemlineatus
ENSCHIG00000003491	TNRC6B	100	94.259	ENSJJAG00000015779	Tnrc6b	99	94.091	Jaculus_jaculus
ENSCHIG00000003491	TNRC6B	99	61.202	ENSLACG00000000628	-	99	61.340	Latimeria_chalumnae
ENSCHIG00000003491	TNRC6B	78	94.840	ENSLAFG00000014473	TNRC6B	100	95.438	Loxodonta_africana
ENSCHIG00000003491	TNRC6B	99	95.660	ENSMFAG00000003862	TNRC6B	98	98.193	Macaca_fascicularis
ENSCHIG00000003491	TNRC6B	100	96.156	ENSMMUG00000021345	TNRC6B	98	98.193	Macaca_mulatta
ENSCHIG00000003491	TNRC6B	99	96.043	ENSMNEG00000042745	TNRC6B	100	96.043	Macaca_nemestrina
ENSCHIG00000003491	TNRC6B	99	95.660	ENSMLEG00000041780	TNRC6B	98	98.193	Mandrillus_leucophaeus
ENSCHIG00000003491	TNRC6B	99	83.161	ENSMGAG00000012333	TNRC6B	99	82.314	Meleagris_gallopavo
ENSCHIG00000003491	TNRC6B	99	94.410	ENSMAUG00000016123	Tnrc6b	98	94.015	Mesocricetus_auratus
ENSCHIG00000003491	TNRC6B	99	95.986	ENSMICG00000014056	TNRC6B	100	95.986	Microcebus_murinus
ENSCHIG00000003491	TNRC6B	96	95.500	ENSMOCG00000020334	Tnrc6b	99	95.500	Microtus_ochrogaster
ENSCHIG00000003491	TNRC6B	100	93.987	MGP_CAROLIEiJ_G0020043	Tnrc6b	99	93.931	Mus_caroli
ENSCHIG00000003491	TNRC6B	100	94.042	ENSMUSG00000047888	Tnrc6b	99	93.875	Mus_musculus
ENSCHIG00000003491	TNRC6B	100	93.760	MGP_PahariEiJ_G0020045	Tnrc6b	99	93.593	Mus_pahari
ENSCHIG00000003491	TNRC6B	100	94.154	MGP_SPRETEiJ_G0020941	Tnrc6b	99	93.987	Mus_spretus
ENSCHIG00000003491	TNRC6B	96	98.095	ENSMPUG00000016442	TNRC6B	100	85.342	Mustela_putorius_furo
ENSCHIG00000003491	TNRC6B	99	91.285	ENSMLUG00000008765	TNRC6B	99	89.804	Myotis_lucifugus
ENSCHIG00000003491	TNRC6B	100	94.546	ENSNGAG00000021294	Tnrc6b	99	94.101	Nannospalax_galili
ENSCHIG00000003491	TNRC6B	88	95.522	ENSNLEG00000015311	TNRC6B	98	98.193	Nomascus_leucogenys
ENSCHIG00000003491	TNRC6B	89	92.574	ENSOPRG00000012054	TNRC6B	88	89.600	Ochotona_princeps
ENSCHIG00000003491	TNRC6B	100	95.270	ENSODEG00000013146	TNRC6B	99	94.936	Octodon_degus
ENSCHIG00000003491	TNRC6B	51	47.586	ENSONIG00000019679	-	99	42.080	Oreochromis_niloticus
ENSCHIG00000003491	TNRC6B	100	95.429	ENSOCUG00000016128	TNRC6B	99	95.206	Oryctolagus_cuniculus
ENSCHIG00000003491	TNRC6B	99	91.352	ENSOGAG00000011096	TNRC6B	99	89.809	Otolemur_garnettii
ENSCHIG00000003491	TNRC6B	100	99.223	ENSOARG00000017238	TNRC6B	99	99.223	Ovis_aries
ENSCHIG00000003491	TNRC6B	99	95.618	ENSPPAG00000028514	TNRC6B	98	98.193	Pan_paniscus
ENSCHIG00000003491	TNRC6B	99	93.438	ENSPPRG00000017741	TNRC6B	98	97.762	Panthera_pardus
ENSCHIG00000003491	TNRC6B	99	87.562	ENSPTIG00000022064	TNRC6B	98	92.771	Panthera_tigris_altaica
ENSCHIG00000003491	TNRC6B	99	95.657	ENSPTRG00000047826	TNRC6B	98	98.193	Pan_troglodytes
ENSCHIG00000003491	TNRC6B	98	86.390	ENSPANG00000009271	TNRC6B	99	87.278	Papio_anubis
ENSCHIG00000003491	TNRC6B	99	87.739	ENSPSIG00000005318	TNRC6B	99	87.233	Pelodiscus_sinensis
ENSCHIG00000003491	TNRC6B	100	93.663	ENSPEMG00000011403	Tnrc6b	99	93.441	Peromyscus_maniculatus_bairdii
ENSCHIG00000003491	TNRC6B	98	86.875	ENSPCIG00000020347	TNRC6B	99	86.761	Phascolarctos_cinereus
ENSCHIG00000003491	TNRC6B	70	49.625	ENSPFOG00000006033	-	97	42.368	Poecilia_formosa
ENSCHIG00000003491	TNRC6B	56	54.054	ENSPMEG00000006371	-	94	54.739	Poecilia_mexicana
ENSCHIG00000003491	TNRC6B	99	92.485	ENSPPYG00000011849	TNRC6B	99	93.142	Pongo_abelii
ENSCHIG00000003491	TNRC6B	72	92.402	ENSPCAG00000008739	TNRC6B	73	91.170	Procavia_capensis
ENSCHIG00000003491	TNRC6B	99	95.080	ENSPCOG00000020790	TNRC6B	98	97.590	Propithecus_coquereli
ENSCHIG00000003491	TNRC6B	93	95.489	ENSPVAG00000004975	TNRC6B	93	94.737	Pteropus_vampyrus
ENSCHIG00000003491	TNRC6B	100	94.013	ENSRNOG00000024907	Tnrc6b	99	93.459	Rattus_norvegicus
ENSCHIG00000003491	TNRC6B	98	95.620	ENSRBIG00000035576	TNRC6B	99	98.193	Rhinopithecus_bieti
ENSCHIG00000003491	TNRC6B	99	95.415	ENSRROG00000031135	TNRC6B	98	98.193	Rhinopithecus_roxellana
ENSCHIG00000003491	TNRC6B	99	92.728	ENSSBOG00000029743	TNRC6B	100	93.556	Saimiri_boliviensis_boliviensis
ENSCHIG00000003491	TNRC6B	99	81.952	ENSSHAG00000009692	TNRC6B	99	80.945	Sarcophilus_harrisii
ENSCHIG00000003491	TNRC6B	66	86.441	ENSSARG00000007971	-	70	86.441	Sorex_araneus
ENSCHIG00000003491	TNRC6B	100	96.990	ENSSSCG00000000078	TNRC6B	99	96.908	Sus_scrofa
ENSCHIG00000003491	TNRC6B	100	91.249	ENSTTRG00000011465	TNRC6B	99	91.360	Tursiops_truncatus
ENSCHIG00000003491	TNRC6B	100	95.373	ENSUAMG00000007174	TNRC6B	99	95.980	Ursus_americanus
ENSCHIG00000003491	TNRC6B	99	96.946	ENSUMAG00000014336	TNRC6B	100	96.946	Ursus_maritimus
ENSCHIG00000003491	TNRC6B	69	90.928	ENSVPAG00000001467	TNRC6B	73	89.241	Vicugna_pacos
ENSCHIG00000003491	TNRC6B	100	96.992	ENSVVUG00000007064	TNRC6B	100	96.992	Vulpes_vulpes