EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000004579 (Gene tree)
Gene ID: 102188099
Gene Symbol: DDX39B
Alias: BAT1|D6S81E|UAP56
Full Name: DExD-box helicase 39B
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 10928 bases
Position: chr23:22206155-22217082
Accession: 102188099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000002143	ResIII	PF04851.15	2.2e-07	1	1
ENSCHIP00000002143	DEAD	PF00270.29	8.9e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000006478	DDX39B-201	1611	XM_018039045	ENSCHIP00000002143	428 (aa)	XP_017894534	UPI00004EE19D

Gene Model

Click here to download ENSCHIG00000004579's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03013	RNA transport	KEGG
chx03015	mRNA surveillance pathway	KEGG
chx03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000004579's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000004579	DDX39B	85	38.082	ENSCHIG00000024284	EIF4A3	88	38.082
ENSCHIG00000004579	DDX39B	92	36.802	ENSCHIG00000022153	EIF4A1	95	36.802
ENSCHIG00000004579	DDX39B	90	35.659	ENSCHIG00000026114	DDX6	79	35.659
ENSCHIG00000004579	DDX39B	87	32.283	ENSCHIG00000019910	DDX49	78	32.283
ENSCHIG00000004579	DDX39B	91	32.581	ENSCHIG00000020418	DDX19A	82	32.642
ENSCHIG00000004579	DDX39B	86	39.189	ENSCHIG00000012317	EIF4A2	90	39.189
ENSCHIG00000004579	DDX39B	91	33.085	ENSCHIG00000006239	-	85	33.085
ENSCHIG00000004579	DDX39B	84	31.367	ENSCHIG00000014324	-	84	31.500
ENSCHIG00000004579	DDX39B	93	93.703	ENSCHIG00000019059	DDX39A	100	91.121
ENSCHIG00000004579	DDX39B	81	35.159	ENSCHIG00000026011	DDX47	75	35.159
ENSCHIG00000004579	DDX39B	77	30.029	ENSCHIG00000011800	DDX5	55	30.029

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000004579	DDX39B	100	99.766	ENSG00000198563	DDX39B	100	100.000	Homo_sapiens
ENSCHIG00000004579	DDX39B	100	99.533	ENSAMEG00000009508	DDX39B	99	99.533	Ailuropoda_melanoleuca
ENSCHIG00000004579	DDX39B	99	93.677	ENSACIG00000004534	ddx39b	98	93.677	Amphilophus_citrinellus
ENSCHIG00000004579	DDX39B	100	92.824	ENSATEG00000012366	ddx39b	100	92.824	Anabas_testudineus
ENSCHIG00000004579	DDX39B	100	97.436	ENSACAG00000012240	DDX39B	100	97.436	Anolis_carolinensis
ENSCHIG00000004579	DDX39B	100	99.766	ENSANAG00000030372	DDX39B	100	99.766	Aotus_nancymaae
ENSCHIG00000004579	DDX39B	99	90.783	ENSACLG00000018759	ddx39b	99	90.783	Astatotilapia_calliptera
ENSCHIG00000004579	DDX39B	100	92.431	ENSAMXG00000017837	ddx39b	100	92.431	Astyanax_mexicanus
ENSCHIG00000004579	DDX39B	100	100.000	ENSBTAG00000014490	DDX39B	100	100.000	Bos_taurus
ENSCHIG00000004579	DDX39B	100	99.766	ENSCJAG00000003152	DDX39B	100	99.766	Callithrix_jacchus
ENSCHIG00000004579	DDX39B	100	99.299	ENSCAFG00000000509	DDX39B	100	99.677	Canis_familiaris
ENSCHIG00000004579	DDX39B	100	99.299	ENSCAFG00020020530	DDX39B	100	99.299	Canis_lupus_dingo
ENSCHIG00000004579	DDX39B	100	99.766	ENSTSYG00000010226	-	100	99.766	Carlito_syrichta
ENSCHIG00000004579	DDX39B	100	85.047	ENSTSYG00000029741	-	91	87.619	Carlito_syrichta
ENSCHIG00000004579	DDX39B	100	99.533	ENSCAPG00000010066	DDX39B	100	99.533	Cavia_aperea
ENSCHIG00000004579	DDX39B	100	99.533	ENSCPOG00000002335	DDX39B	100	99.533	Cavia_porcellus
ENSCHIG00000004579	DDX39B	100	99.766	ENSCCAG00000027897	DDX39B	100	99.766	Cebus_capucinus
ENSCHIG00000004579	DDX39B	99	90.118	ENSCATG00000043709	DDX39B	99	90.118	Cercocebus_atys
ENSCHIG00000004579	DDX39B	100	99.533	ENSCLAG00000014555	DDX39B	100	99.533	Chinchilla_lanigera
ENSCHIG00000004579	DDX39B	99	99.529	ENSCSAG00000008517	DDX39B	100	99.529	Chlorocebus_sabaeus
ENSCHIG00000004579	DDX39B	64	100.000	ENSCPBG00000014671	-	100	100.000	Chrysemys_picta_bellii
ENSCHIG00000004579	DDX39B	100	99.766	ENSCANG00000041217	DDX39B	100	99.766	Colobus_angolensis_palliatus
ENSCHIG00000004579	DDX39B	57	98.776	ENSCGRG00001017315	-	95	98.544	Cricetulus_griseus_chok1gshd
ENSCHIG00000004579	DDX39B	83	84.078	ENSCGRG00001021916	-	89	84.078	Cricetulus_griseus_chok1gshd
ENSCHIG00000004579	DDX39B	57	98.776	ENSCGRG00000012479	-	76	98.776	Cricetulus_griseus_crigri
ENSCHIG00000004579	DDX39B	100	92.414	ENSDARG00000036069	ddx39b	100	92.644	Danio_rerio
ENSCHIG00000004579	DDX39B	100	99.766	ENSDNOG00000010215	DDX39B	100	99.766	Dasypus_novemcinctus
ENSCHIG00000004579	DDX39B	87	99.465	ENSDORG00000004985	Ddx39b	100	99.465	Dipodomys_ordii
ENSCHIG00000004579	DDX39B	87	86.631	ENSETEG00000009649	DDX39B	87	86.631	Echinops_telfairi
ENSCHIG00000004579	DDX39B	100	99.766	ENSEASG00005017156	DDX39B	100	99.766	Equus_asinus_asinus
ENSCHIG00000004579	DDX39B	100	99.766	ENSECAG00000007750	DDX39B	100	99.766	Equus_caballus
ENSCHIG00000004579	DDX39B	100	92.343	ENSELUG00000017904	ddx39b	100	92.343	Esox_lucius
ENSCHIG00000004579	DDX39B	100	99.533	ENSFCAG00000004497	DDX39B	100	99.533	Felis_catus
ENSCHIG00000004579	DDX39B	100	99.533	ENSFDAG00000011074	DDX39B	100	99.533	Fukomys_damarensis
ENSCHIG00000004579	DDX39B	74	100.000	ENSGAGG00000001300	-	80	100.000	Gopherus_agassizii
ENSCHIG00000004579	DDX39B	100	99.766	ENSGGOG00000005989	DDX39B	100	99.766	Gorilla_gorilla
ENSCHIG00000004579	DDX39B	100	99.065	ENSHGLG00000019248	DDX39B	100	99.065	Heterocephalus_glaber_female
ENSCHIG00000004579	DDX39B	100	99.065	ENSHGLG00100011850	DDX39B	100	99.065	Heterocephalus_glaber_male
ENSCHIG00000004579	DDX39B	100	91.284	ENSIPUG00000015733	DDX39B	94	91.743	Ictalurus_punctatus
ENSCHIG00000004579	DDX39B	100	99.299	ENSSTOG00000012838	DDX39B	100	99.299	Ictidomys_tridecemlineatus
ENSCHIG00000004579	DDX39B	100	99.065	ENSJJAG00000005660	-	100	99.065	Jaculus_jaculus
ENSCHIG00000004579	DDX39B	99	78.251	ENSLBEG00000012254	ddx39b	99	78.220	Labrus_bergylta
ENSCHIG00000004579	DDX39B	66	79.078	ENSLBEG00000017177	-	85	75.102	Labrus_bergylta
ENSCHIG00000004579	DDX39B	100	89.862	ENSLACG00000002110	DDX39B	100	89.862	Latimeria_chalumnae
ENSCHIG00000004579	DDX39B	100	99.533	ENSLAFG00000014202	DDX39B	100	99.533	Loxodonta_africana
ENSCHIG00000004579	DDX39B	100	99.766	ENSMFAG00000034233	DDX39B	100	99.766	Macaca_fascicularis
ENSCHIG00000004579	DDX39B	100	99.766	ENSMMUG00000008839	DDX39B	100	99.766	Macaca_mulatta
ENSCHIG00000004579	DDX39B	100	99.766	ENSMNEG00000041059	DDX39B	100	99.766	Macaca_nemestrina
ENSCHIG00000004579	DDX39B	100	99.766	ENSMLEG00000043791	DDX39B	100	99.766	Mandrillus_leucophaeus
ENSCHIG00000004579	DDX39B	99	90.783	ENSMZEG00005017654	ddx39b	99	90.783	Maylandia_zebra
ENSCHIG00000004579	DDX39B	100	99.065	ENSMAUG00000008059	Ddx39b	100	99.065	Mesocricetus_auratus
ENSCHIG00000004579	DDX39B	100	99.766	ENSMICG00000017349	DDX39B	100	99.766	Microcebus_murinus
ENSCHIG00000004579	DDX39B	100	99.299	ENSMOCG00000011169	Ddx39b	100	99.299	Microtus_ochrogaster
ENSCHIG00000004579	DDX39B	88	99.468	ENSMODG00000015791	DDX39B	88	99.468	Monodelphis_domestica
ENSCHIG00000004579	DDX39B	100	99.299	ENSMUSG00000019432	Ddx39b	100	99.324	Mus_musculus
ENSCHIG00000004579	DDX39B	100	99.299	MGP_PahariEiJ_G0020513	Ddx39b	100	99.324	Mus_pahari
ENSCHIG00000004579	DDX39B	100	99.299	MGP_SPRETEiJ_G0022424	Ddx39b	100	99.299	Mus_spretus
ENSCHIG00000004579	DDX39B	100	99.533	ENSMPUG00000011407	DDX39B	100	99.533	Mustela_putorius_furo
ENSCHIG00000004579	DDX39B	73	99.678	ENSMLUG00000001681	DDX39B	100	99.678	Myotis_lucifugus
ENSCHIG00000004579	DDX39B	100	99.766	ENSNGAG00000022948	Ddx39b	100	99.766	Nannospalax_galili
ENSCHIG00000004579	DDX39B	100	75.467	ENSNLEG00000006094	DDX39B	100	75.467	Nomascus_leucogenys
ENSCHIG00000004579	DDX39B	86	100.000	ENSMEUG00000008264	DDX39B	86	100.000	Notamacropus_eugenii
ENSCHIG00000004579	DDX39B	100	99.533	ENSOPRG00000011923	DDX39B	100	99.533	Ochotona_princeps
ENSCHIG00000004579	DDX39B	100	99.299	ENSODEG00000018083	DDX39B	100	99.299	Octodon_degus
ENSCHIG00000004579	DDX39B	100	91.898	ENSONIG00000004740	ddx39b	100	91.898	Oreochromis_niloticus
ENSCHIG00000004579	DDX39B	55	98.734	ENSOANG00000008361	DDX39B	95	98.734	Ornithorhynchus_anatinus
ENSCHIG00000004579	DDX39B	100	95.937	ENSOCUG00000024126	DDX39B	100	95.937	Oryctolagus_cuniculus
ENSCHIG00000004579	DDX39B	100	98.368	ENSOGAG00000028850	-	100	98.368	Otolemur_garnettii
ENSCHIG00000004579	DDX39B	84	91.444	ENSOGAG00000009067	-	100	98.148	Otolemur_garnettii
ENSCHIG00000004579	DDX39B	100	100.000	ENSOARG00000008787	DDX39B	98	100.000	Ovis_aries
ENSCHIG00000004579	DDX39B	100	99.766	ENSPPAG00000043072	DDX39B	100	99.766	Pan_paniscus
ENSCHIG00000004579	DDX39B	100	99.533	ENSPPRG00000001913	DDX39B	100	99.533	Panthera_pardus
ENSCHIG00000004579	DDX39B	100	98.598	ENSPTIG00000017669	DDX39B	100	98.598	Panthera_tigris_altaica
ENSCHIG00000004579	DDX39B	100	99.766	ENSPTRG00000032509	DDX39B	100	99.766	Pan_troglodytes
ENSCHIG00000004579	DDX39B	100	99.766	ENSPANG00000018609	DDX39B	100	99.766	Papio_anubis
ENSCHIG00000004579	DDX39B	100	90.847	ENSPKIG00000011324	ddx39b	100	91.533	Paramormyrops_kingsleyae
ENSCHIG00000004579	DDX39B	100	99.065	ENSPEMG00000016905	Ddx39b	100	99.065	Peromyscus_maniculatus_bairdii
ENSCHIG00000004579	DDX39B	100	99.766	ENSPCIG00000017572	DDX39B	100	99.766	Phascolarctos_cinereus
ENSCHIG00000004579	DDX39B	100	99.766	ENSPPYG00000016433	DDX39B	100	99.766	Pongo_abelii
ENSCHIG00000004579	DDX39B	66	99.648	ENSPCAG00000003484	DDX39B	100	99.648	Procavia_capensis
ENSCHIG00000004579	DDX39B	100	99.766	ENSPCOG00000018656	DDX39B	100	99.766	Propithecus_coquereli
ENSCHIG00000004579	DDX39B	100	99.299	ENSPVAG00000004653	DDX39B	100	99.299	Pteropus_vampyrus
ENSCHIG00000004579	DDX39B	99	82.904	ENSPNYG00000010382	ddx39b	98	82.904	Pundamilia_nyererei
ENSCHIG00000004579	DDX39B	100	92.202	ENSPNAG00000026926	ddx39b	100	92.202	Pygocentrus_nattereri
ENSCHIG00000004579	DDX39B	100	99.299	ENSRNOG00000000841	Ddx39b	100	99.299	Rattus_norvegicus
ENSCHIG00000004579	DDX39B	100	89.486	ENSRBIG00000031309	DDX39B	100	89.486	Rhinopithecus_bieti
ENSCHIG00000004579	DDX39B	100	99.766	ENSRROG00000039517	DDX39B	100	99.766	Rhinopithecus_roxellana
ENSCHIG00000004579	DDX39B	100	89.486	ENSSBOG00000035513	-	100	89.486	Saimiri_boliviensis_boliviensis
ENSCHIG00000004579	DDX39B	100	99.766	ENSSHAG00000003209	DDX39B	100	99.766	Sarcophilus_harrisii
ENSCHIG00000004579	DDX39B	100	91.076	ENSSFOG00015016107	ddx39b	100	91.762	Scleropages_formosus
ENSCHIG00000004579	DDX39B	100	93.287	ENSSDUG00000011557	ddx39b	100	93.519	Seriola_dumerili
ENSCHIG00000004579	DDX39B	100	93.056	ENSSLDG00000015763	ddx39b	100	93.287	Seriola_lalandi_dorsalis
ENSCHIG00000004579	DDX39B	87	87.433	ENSSARG00000005245	DDX39B	100	87.433	Sorex_araneus
ENSCHIG00000004579	DDX39B	100	98.131	ENSSPUG00000012805	DDX39B	100	98.131	Sphenodon_punctatus
ENSCHIG00000004579	DDX39B	100	99.766	ENSSSCG00000001400	DDX39B	100	99.711	Sus_scrofa
ENSCHIG00000004579	DDX39B	100	76.869	ENSTBEG00000003721	DDX39B	100	76.869	Tupaia_belangeri
ENSCHIG00000004579	DDX39B	100	91.224	ENSTTRG00000014074	DDX39B	100	91.224	Tursiops_truncatus
ENSCHIG00000004579	DDX39B	100	86.744	ENSUAMG00000027335	DDX39B	100	86.744	Ursus_americanus
ENSCHIG00000004579	DDX39B	100	90.654	ENSUMAG00000015124	DDX39B	100	90.654	Ursus_maritimus
ENSCHIG00000004579	DDX39B	61	100.000	ENSVPAG00000009167	-	74	100.000	Vicugna_pacos
ENSCHIG00000004579	DDX39B	100	99.299	ENSVVUG00000019518	DDX39B	99	99.299	Vulpes_vulpes
ENSCHIG00000004579	DDX39B	100	84.186	ENSXETG00000002498	ddx39b	99	84.186	Xenopus_tropicalis