EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000004810 (Gene tree)
Gene ID: 102187203
Gene Symbol: YTHDC1
Alias: KIAA1966|YT521|YT521-B
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 26738 bases
Position: chr6:84816849-84843586
Accession: 102187203
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000002300	YTH	PF04146.15	5.9e-40	1	1
ENSCHIP00000002274	YTH	PF04146.15	1.3e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000007122	YTHDC1-202	1641	-	ENSCHIP00000002300	546 (aa)	-	UPI000D190293
ENSCHIT00000007053	YTHDC1-201	2097	XM_018049515	ENSCHIP00000002274	698 (aa)	XP_017905004	UPI000D19244D

Gene Model

Click here to download ENSCHIG00000004810's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000004810's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000004810	YTHDC1	98	90.797	ENSG00000083896	YTHDC1	99	90.797	Homo_sapiens
ENSCHIG00000004810	YTHDC1	54	53.788	ENSAPOG00000013997	ythdc1	57	56.000	Acanthochromis_polyacanthus
ENSCHIG00000004810	YTHDC1	95	91.856	ENSAMEG00000005688	YTHDC1	91	86.370	Ailuropoda_melanoleuca
ENSCHIG00000004810	YTHDC1	63	69.531	ENSACIG00000019728	ythdc1	78	52.513	Amphilophus_citrinellus
ENSCHIG00000004810	YTHDC1	54	56.355	ENSAOCG00000000239	ythdc1	59	60.192	Amphiprion_ocellaris
ENSCHIG00000004810	YTHDC1	95	82.012	ENSAPLG00000009921	YTHDC1	92	77.563	Anas_platyrhynchos
ENSCHIG00000004810	YTHDC1	95	81.310	ENSACAG00000009697	YTHDC1	91	75.223	Anolis_carolinensis
ENSCHIG00000004810	YTHDC1	95	93.536	ENSANAG00000001522	YTHDC1	91	89.160	Aotus_nancymaae
ENSCHIG00000004810	YTHDC1	54	54.197	ENSACLG00000019371	ythdc1	69	54.286	Astatotilapia_calliptera
ENSCHIG00000004810	YTHDC1	95	62.004	ENSAMXG00000006978	ythdc1	91	61.271	Astyanax_mexicanus
ENSCHIG00000004810	YTHDC1	98	98.830	ENSBTAG00000015572	YTHDC1	98	98.830	Bos_taurus
ENSCHIG00000004810	YTHDC1	95	93.916	ENSCJAG00000009934	YTHDC1	91	89.466	Callithrix_jacchus
ENSCHIG00000004810	YTHDC1	95	91.667	ENSCAFG00000002821	YTHDC1	91	86.222	Canis_familiaris
ENSCHIG00000004810	YTHDC1	95	91.667	ENSCAFG00020027112	YTHDC1	91	86.222	Canis_lupus_dingo
ENSCHIG00000004810	YTHDC1	98	93.239	ENSTSYG00000011668	YTHDC1	100	93.239	Carlito_syrichta
ENSCHIG00000004810	YTHDC1	96	70.356	ENSCAPG00000008722	YTHDC1	90	62.500	Cavia_aperea
ENSCHIG00000004810	YTHDC1	95	93.143	ENSCPOG00000010929	YTHDC1	90	80.458	Cavia_porcellus
ENSCHIG00000004810	YTHDC1	95	94.275	ENSCCAG00000035754	YTHDC1	91	89.008	Cebus_capucinus
ENSCHIG00000004810	YTHDC1	98	96.082	ENSCATG00000036320	YTHDC1	100	96.082	Cercocebus_atys
ENSCHIG00000004810	YTHDC1	95	94.073	ENSCLAG00000005482	YTHDC1	92	88.379	Chinchilla_lanigera
ENSCHIG00000004810	YTHDC1	95	93.346	ENSCSAG00000005252	YTHDC1	91	86.627	Chlorocebus_sabaeus
ENSCHIG00000004810	YTHDC1	95	85.328	ENSCPBG00000021965	YTHDC1	92	80.751	Chrysemys_picta_bellii
ENSCHIG00000004810	YTHDC1	98	95.896	ENSCANG00000004769	YTHDC1	99	95.896	Colobus_angolensis_palliatus
ENSCHIG00000004810	YTHDC1	95	92.381	ENSCGRG00001000816	Ythdc1	91	87.176	Cricetulus_griseus_chok1gshd
ENSCHIG00000004810	YTHDC1	95	91.856	ENSCGRG00000009807	Ythdc1	93	86.778	Cricetulus_griseus_crigri
ENSCHIG00000004810	YTHDC1	54	54.630	ENSCSEG00000020404	ythdc1	59	59.615	Cynoglossus_semilaevis
ENSCHIG00000004810	YTHDC1	50	67.153	ENSCVAG00000022349	ythdc1	59	59.903	Cyprinodon_variegatus
ENSCHIG00000004810	YTHDC1	95	60.269	ENSDARG00000051953	ythdc1	58	72.953	Danio_rerio
ENSCHIG00000004810	YTHDC1	95	95.769	ENSDNOG00000004949	YTHDC1	91	85.312	Dasypus_novemcinctus
ENSCHIG00000004810	YTHDC1	95	90.857	ENSDORG00000013045	Ythdc1	92	90.979	Dipodomys_ordii
ENSCHIG00000004810	YTHDC1	66	100.000	ENSETEG00000001878	YTHDC1	75	92.611	Echinops_telfairi
ENSCHIG00000004810	YTHDC1	98	90.672	ENSEASG00005018383	YTHDC1	99	90.672	Equus_asinus_asinus
ENSCHIG00000004810	YTHDC1	95	91.871	ENSECAG00000018303	YTHDC1	98	92.628	Equus_caballus
ENSCHIG00000004810	YTHDC1	95	90.684	ENSEEUG00000015466	YTHDC1	91	88.262	Erinaceus_europaeus
ENSCHIG00000004810	YTHDC1	94	60.803	ENSELUG00000014029	ythdc1	71	61.479	Esox_lucius
ENSCHIG00000004810	YTHDC1	95	91.698	ENSFCAG00000026791	YTHDC1	91	91.616	Felis_catus
ENSCHIG00000004810	YTHDC1	58	93.536	ENSFALG00000006581	YTHDC1	85	83.250	Ficedula_albicollis
ENSCHIG00000004810	YTHDC1	95	93.870	ENSFDAG00000018560	YTHDC1	92	88.685	Fukomys_damarensis
ENSCHIG00000004810	YTHDC1	62	64.211	ENSGMOG00000018815	ythdc1	58	81.295	Gadus_morhua
ENSCHIG00000004810	YTHDC1	98	83.022	ENSGALG00000035906	YTHDC1	90	81.426	Gallus_gallus
ENSCHIG00000004810	YTHDC1	67	65.693	ENSGAFG00000001759	ythdc1	63	61.017	Gambusia_affinis
ENSCHIG00000004810	YTHDC1	54	57.816	ENSGACG00000015486	ythdc1	57	57.248	Gasterosteus_aculeatus
ENSCHIG00000004810	YTHDC1	95	85.300	ENSGAGG00000007108	YTHDC1	91	80.763	Gopherus_agassizii
ENSCHIG00000004810	YTHDC1	97	95.888	ENSGGOG00000021958	YTHDC1	99	95.888	Gorilla_gorilla
ENSCHIG00000004810	YTHDC1	54	54.197	ENSHBUG00000019288	ythdc1	69	54.286	Haplochromis_burtoni
ENSCHIG00000004810	YTHDC1	95	94.050	ENSHGLG00000006319	-	91	87.634	Heterocephalus_glaber_female
ENSCHIG00000004810	YTHDC1	95	71.705	ENSHGLG00000003239	-	69	72.084	Heterocephalus_glaber_female
ENSCHIG00000004810	YTHDC1	95	92.131	ENSHGLG00100001556	-	92	86.033	Heterocephalus_glaber_male
ENSCHIG00000004810	YTHDC1	95	69.750	ENSHGLG00100008060	-	69	70.152	Heterocephalus_glaber_male
ENSCHIG00000004810	YTHDC1	95	63.724	ENSIPUG00000018136	ythdc1	61	71.298	Ictalurus_punctatus
ENSCHIG00000004810	YTHDC1	98	93.239	ENSSTOG00000013652	YTHDC1	99	93.239	Ictidomys_tridecemlineatus
ENSCHIG00000004810	YTHDC1	95	88.825	ENSJJAG00000010268	Ythdc1	92	85.321	Jaculus_jaculus
ENSCHIG00000004810	YTHDC1	54	54.415	ENSKMAG00000006483	ythdc1	85	58.473	Kryptolebias_marmoratus
ENSCHIG00000004810	YTHDC1	54	56.039	ENSLBEG00000020831	ythdc1	91	56.905	Labrus_bergylta
ENSCHIG00000004810	YTHDC1	88	71.053	ENSLACG00000004893	YTHDC1	92	66.667	Latimeria_chalumnae
ENSCHIG00000004810	YTHDC1	91	71.146	ENSLOCG00000003045	ythdc1	91	75.708	Lepisosteus_oculatus
ENSCHIG00000004810	YTHDC1	95	94.038	ENSLAFG00000021592	YTHDC1	91	86.181	Loxodonta_africana
ENSCHIG00000004810	YTHDC1	98	95.896	ENSMFAG00000031927	YTHDC1	99	95.896	Macaca_fascicularis
ENSCHIG00000004810	YTHDC1	98	91.059	ENSMMUG00000002265	YTHDC1	99	91.059	Macaca_mulatta
ENSCHIG00000004810	YTHDC1	98	95.709	ENSMNEG00000033751	YTHDC1	99	95.709	Macaca_nemestrina
ENSCHIG00000004810	YTHDC1	98	95.896	ENSMLEG00000042147	YTHDC1	99	95.896	Mandrillus_leucophaeus
ENSCHIG00000004810	YTHDC1	54	55.288	ENSMAMG00000013122	ythdc1	68	54.459	Mastacembelus_armatus
ENSCHIG00000004810	YTHDC1	54	54.197	ENSMZEG00005023173	ythdc1	69	54.286	Maylandia_zebra
ENSCHIG00000004810	YTHDC1	95	80.888	ENSMGAG00000010391	YTHDC1	91	76.855	Meleagris_gallopavo
ENSCHIG00000004810	YTHDC1	95	92.000	ENSMAUG00000001286	Ythdc1	91	86.870	Mesocricetus_auratus
ENSCHIG00000004810	YTHDC1	95	94.837	ENSMICG00000034640	YTHDC1	90	89.818	Microcebus_murinus
ENSCHIG00000004810	YTHDC1	95	92.925	ENSMOCG00000020201	Ythdc1	91	87.328	Microtus_ochrogaster
ENSCHIG00000004810	YTHDC1	62	50.628	ENSMODG00000009173	-	88	53.444	Monodelphis_domestica
ENSCHIG00000004810	YTHDC1	93	51.938	ENSMODG00000010076	-	85	53.428	Monodelphis_domestica
ENSCHIG00000004810	YTHDC1	95	87.234	ENSMODG00000020754	-	91	79.643	Monodelphis_domestica
ENSCHIG00000004810	YTHDC1	84	73.091	ENSMODG00000014337	-	93	62.469	Monodelphis_domestica
ENSCHIG00000004810	YTHDC1	50	68.592	ENSMALG00000013412	ythdc1	78	53.962	Monopterus_albus
ENSCHIG00000004810	YTHDC1	98	91.743	MGP_CAROLIEiJ_G0027347	Ythdc1	97	91.544	Mus_caroli
ENSCHIG00000004810	YTHDC1	95	92.789	ENSMUSG00000035851	Ythdc1	97	88.440	Mus_musculus
ENSCHIG00000004810	YTHDC1	95	92.789	MGP_PahariEiJ_G0017126	Ythdc1	97	88.807	Mus_pahari
ENSCHIG00000004810	YTHDC1	95	92.979	MGP_SPRETEiJ_G0028339	Ythdc1	97	88.624	Mus_spretus
ENSCHIG00000004810	YTHDC1	95	66.730	ENSMPUG00000001743	YTHDC1	74	84.655	Mustela_putorius_furo
ENSCHIG00000004810	YTHDC1	95	92.514	ENSMLUG00000016300	YTHDC1	92	88.244	Myotis_lucifugus
ENSCHIG00000004810	YTHDC1	81	85.045	ENSNGAG00000024000	Ythdc1	93	86.788	Nannospalax_galili
ENSCHIG00000004810	YTHDC1	58	58.940	ENSNBRG00000007663	ythdc1	70	58.578	Neolamprologus_brichardi
ENSCHIG00000004810	YTHDC1	98	93.271	ENSNLEG00000009202	YTHDC1	99	93.832	Nomascus_leucogenys
ENSCHIG00000004810	YTHDC1	85	79.153	ENSMEUG00000007128	YTHDC1	81	79.153	Notamacropus_eugenii
ENSCHIG00000004810	YTHDC1	78	96.399	ENSOPRG00000008986	YTHDC1	74	96.399	Ochotona_princeps
ENSCHIG00000004810	YTHDC1	95	92.514	ENSODEG00000001715	YTHDC1	91	87.685	Octodon_degus
ENSCHIG00000004810	YTHDC1	54	54.676	ENSONIG00000012651	ythdc1	59	59.233	Oreochromis_niloticus
ENSCHIG00000004810	YTHDC1	95	70.986	ENSOANG00000014398	YTHDC1	99	70.986	Ornithorhynchus_anatinus
ENSCHIG00000004810	YTHDC1	95	76.762	ENSOCUG00000015886	YTHDC1	99	72.527	Oryctolagus_cuniculus
ENSCHIG00000004810	YTHDC1	54	54.567	ENSOMEG00000000551	ythdc1	72	53.371	Oryzias_melastigma
ENSCHIG00000004810	YTHDC1	95	92.381	ENSOGAG00000003362	YTHDC1	91	84.844	Otolemur_garnettii
ENSCHIG00000004810	YTHDC1	95	98.289	ENSOARG00000008633	YTHDC1	99	92.435	Ovis_aries
ENSCHIG00000004810	YTHDC1	97	96.442	ENSPPAG00000041315	YTHDC1	99	96.442	Pan_paniscus
ENSCHIG00000004810	YTHDC1	98	91.346	ENSPPRG00000011979	YTHDC1	99	91.346	Panthera_pardus
ENSCHIG00000004810	YTHDC1	98	91.059	ENSPTIG00000015527	YTHDC1	100	91.059	Panthera_tigris_altaica
ENSCHIG00000004810	YTHDC1	97	96.442	ENSPTRG00000016105	YTHDC1	99	96.442	Pan_troglodytes
ENSCHIG00000004810	YTHDC1	98	96.082	ENSPANG00000021590	YTHDC1	99	96.082	Papio_anubis
ENSCHIG00000004810	YTHDC1	95	68.138	ENSPKIG00000018497	ythdc1	83	72.158	Paramormyrops_kingsleyae
ENSCHIG00000004810	YTHDC1	95	84.942	ENSPSIG00000002782	YTHDC1	92	78.190	Pelodiscus_sinensis
ENSCHIG00000004810	YTHDC1	95	92.366	ENSPEMG00000013850	Ythdc1	92	87.156	Peromyscus_maniculatus_bairdii
ENSCHIG00000004810	YTHDC1	95	87.041	ENSPCIG00000006870	YTHDC1	91	81.679	Phascolarctos_cinereus
ENSCHIG00000004810	YTHDC1	50	65.693	ENSPFOG00000013404	ythdc1	60	58.313	Poecilia_formosa
ENSCHIG00000004810	YTHDC1	50	65.693	ENSPLAG00000011079	ythdc1	85	58.313	Poecilia_latipinna
ENSCHIG00000004810	YTHDC1	50	65.693	ENSPMEG00000009238	ythdc1	60	58.313	Poecilia_mexicana
ENSCHIG00000004810	YTHDC1	60	68.519	ENSPREG00000016973	ythdc1	59	54.198	Poecilia_reticulata
ENSCHIG00000004810	YTHDC1	79	92.711	ENSPPYG00000014726	YTHDC1	91	85.154	Pongo_abelii
ENSCHIG00000004810	YTHDC1	75	100.000	ENSPCAG00000009607	YTHDC1	73	86.984	Procavia_capensis
ENSCHIG00000004810	YTHDC1	98	94.606	ENSPCOG00000019105	YTHDC1	99	94.606	Propithecus_coquereli
ENSCHIG00000004810	YTHDC1	95	89.414	ENSPVAG00000015551	YTHDC1	91	87.278	Pteropus_vampyrus
ENSCHIG00000004810	YTHDC1	54	54.197	ENSPNYG00000011687	ythdc1	59	58.753	Pundamilia_nyererei
ENSCHIG00000004810	YTHDC1	95	68.130	ENSPNAG00000028365	ythdc1	91	61.505	Pygocentrus_nattereri
ENSCHIG00000004810	YTHDC1	95	91.115	ENSRNOG00000001996	Ythdc1	91	85.651	Rattus_norvegicus
ENSCHIG00000004810	YTHDC1	98	93.878	ENSRBIG00000028279	YTHDC1	99	93.878	Rhinopithecus_bieti
ENSCHIG00000004810	YTHDC1	98	95.896	ENSRROG00000035028	YTHDC1	99	95.896	Rhinopithecus_roxellana
ENSCHIG00000004810	YTHDC1	98	96.269	ENSSBOG00000022353	YTHDC1	99	96.269	Saimiri_boliviensis_boliviensis
ENSCHIG00000004810	YTHDC1	95	86.731	ENSSHAG00000002538	YTHDC1	91	79.259	Sarcophilus_harrisii
ENSCHIG00000004810	YTHDC1	95	67.362	ENSSFOG00015003298	ythdc1	60	73.721	Scleropages_formosus
ENSCHIG00000004810	YTHDC1	54	54.481	ENSSMAG00000009086	ythdc1	92	49.335	Scophthalmus_maximus
ENSCHIG00000004810	YTHDC1	54	55.181	ENSSDUG00000022008	ythdc1	70	55.703	Seriola_dumerili
ENSCHIG00000004810	YTHDC1	54	55.181	ENSSLDG00000007926	ythdc1	70	55.703	Seriola_lalandi_dorsalis
ENSCHIG00000004810	YTHDC1	78	89.573	ENSSARG00000010960	YTHDC1	100	89.573	Sorex_araneus
ENSCHIG00000004810	YTHDC1	95	79.576	ENSSPUG00000009357	YTHDC1	91	77.845	Sphenodon_punctatus
ENSCHIG00000004810	YTHDC1	54	55.875	ENSSPAG00000011449	ythdc1	70	56.736	Stegastes_partitus
ENSCHIG00000004810	YTHDC1	98	93.829	ENSSSCG00000035505	YTHDC1	99	93.829	Sus_scrofa
ENSCHIG00000004810	YTHDC1	95	83.591	ENSTGUG00000004452	-	91	77.448	Taeniopygia_guttata
ENSCHIG00000004810	YTHDC1	61	65.909	ENSTRUG00000010142	ythdc1	70	67.442	Takifugu_rubripes
ENSCHIG00000004810	YTHDC1	94	50.480	ENSTNIG00000013243	ythdc1	88	56.019	Tetraodon_nigroviridis
ENSCHIG00000004810	YTHDC1	94	84.016	ENSTBEG00000011546	YTHDC1	91	79.073	Tupaia_belangeri
ENSCHIG00000004810	YTHDC1	95	91.098	ENSTTRG00000005083	YTHDC1	91	86.519	Tursiops_truncatus
ENSCHIG00000004810	YTHDC1	87	91.340	ENSUAMG00000010388	YTHDC1	92	91.368	Ursus_americanus
ENSCHIG00000004810	YTHDC1	95	78.998	ENSUMAG00000013668	YTHDC1	90	71.806	Ursus_maritimus
ENSCHIG00000004810	YTHDC1	95	90.440	ENSVPAG00000009040	YTHDC1	91	89.466	Vicugna_pacos
ENSCHIG00000004810	YTHDC1	98	91.233	ENSVVUG00000005387	YTHDC1	98	91.233	Vulpes_vulpes
ENSCHIG00000004810	YTHDC1	95	70.058	ENSXETG00000017960	ythdc1	91	68.779	Xenopus_tropicalis
ENSCHIG00000004810	YTHDC1	71	50.000	ENSXCOG00000000530	ythdc1	87	50.694	Xiphophorus_couchianus
ENSCHIG00000004810	YTHDC1	50	65.091	ENSXMAG00000005196	ythdc1	61	57.590	Xiphophorus_maculatus