EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000004900 (Gene tree)
Gene ID: 102172177
Gene Symbol: HNRNPU
Alias: C1orf199|FLJ30202|FLJ37978|HNRNPU-AS1|HNRPU|NCRNA00201|SAF-A|hnRNPU
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 15972 bases
Position: chr16:30943992-30959963
Accession: 102172177
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000002212	SAP	PF02037.27	3.4e-10	1	1
ENSCHIP00000002219	SAP	PF02037.27	3.4e-10	1	1
ENSCHIP00000002234	SAP	PF02037.27	3.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000006815	HNRNPU-201	2538	-	ENSCHIP00000002212	804 (aa)	-	UPI000D18DD3F
ENSCHIT00000006848	HNRNPU-202	2406	-	ENSCHIP00000002219	801 (aa)	-	UPI000D1947D6
ENSCHIT00000006903	HNRNPU-203	2553	XM_018060249	ENSCHIP00000002234	806 (aa)	XP_017915738	UPI0005FB71BA

Gene Model

Click here to download ENSCHIG00000004900's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000004900's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000004900	HNRNPU	82	50.334	ENSCHIG00000015165	HNRNPUL1	67	63.415
ENSCHIG00000004900	HNRNPU	70	46.472	ENSCHIG00000020213	-	67	50.595

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000004900	HNRNPU	100	98.511	ENSG00000153187	HNRNPU	100	100.000	Homo_sapiens
ENSCHIG00000004900	HNRNPU	75	56.972	ENSAPOG00000017400	hnrnpub	81	59.133	Acanthochromis_polyacanthus
ENSCHIG00000004900	HNRNPU	100	95.981	ENSAMEG00000009145	HNRNPU	100	95.981	Ailuropoda_melanoleuca
ENSCHIG00000004900	HNRNPU	84	60.033	ENSACIG00000012138	hnrnpub	87	80.952	Amphilophus_citrinellus
ENSCHIG00000004900	HNRNPU	75	56.992	ENSAOCG00000015843	hnrnpub	81	59.288	Amphiprion_ocellaris
ENSCHIG00000004900	HNRNPU	75	56.992	ENSAPEG00000014679	hnrnpub	81	59.288	Amphiprion_percula
ENSCHIG00000004900	HNRNPU	69	61.444	ENSATEG00000016178	hnrnpub	72	59.571	Anabas_testudineus
ENSCHIG00000004900	HNRNPU	80	83.308	ENSACAG00000004511	HNRNPU	72	89.369	Anolis_carolinensis
ENSCHIG00000004900	HNRNPU	100	98.635	ENSANAG00000033895	-	100	98.635	Aotus_nancymaae
ENSCHIG00000004900	HNRNPU	80	83.333	ENSACLG00000008165	hnrnpub	80	57.433	Astatotilapia_calliptera
ENSCHIG00000004900	HNRNPU	100	99.876	ENSBTAG00000007606	HNRNPU	100	99.876	Bos_taurus
ENSCHIG00000004900	HNRNPU	100	96.121	ENSCJAG00000016914	HNRNPU	100	96.121	Callithrix_jacchus
ENSCHIG00000004900	HNRNPU	100	98.759	ENSCAFG00020000918	HNRNPU	100	98.759	Canis_lupus_dingo
ENSCHIG00000004900	HNRNPU	100	95.879	ENSCPOG00000011887	HNRNPU	100	95.879	Cavia_porcellus
ENSCHIG00000004900	HNRNPU	100	97.395	ENSCCAG00000037859	-	100	97.395	Cebus_capucinus
ENSCHIG00000004900	HNRNPU	100	97.519	ENSCATG00000035273	HNRNPU	100	97.519	Cercocebus_atys
ENSCHIG00000004900	HNRNPU	100	96.121	ENSCLAG00000007100	HNRNPU	100	96.121	Chinchilla_lanigera
ENSCHIG00000004900	HNRNPU	100	98.387	ENSCSAG00000009219	HNRNPU	100	98.387	Chlorocebus_sabaeus
ENSCHIG00000004900	HNRNPU	81	100.000	ENSCHOG00000001387	HNRNPU	79	100.000	Choloepus_hoffmanni
ENSCHIG00000004900	HNRNPU	100	78.199	ENSCPBG00000009415	HNRNPU	98	80.075	Chrysemys_picta_bellii
ENSCHIG00000004900	HNRNPU	100	95.343	ENSCANG00000022780	HNRNPU	100	95.343	Colobus_angolensis_palliatus
ENSCHIG00000004900	HNRNPU	100	96.278	ENSCGRG00001020525	Hnrnpu	100	96.278	Cricetulus_griseus_chok1gshd
ENSCHIG00000004900	HNRNPU	81	64.062	ENSCSEG00000010804	hnrnpub	89	64.062	Cynoglossus_semilaevis
ENSCHIG00000004900	HNRNPU	81	71.429	ENSCVAG00000004280	hnrnpub	78	51.821	Cyprinodon_variegatus
ENSCHIG00000004900	HNRNPU	79	85.714	ENSDARG00000004735	hnrnpub	90	59.459	Danio_rerio
ENSCHIG00000004900	HNRNPU	80	62.319	ENSDARG00000015206	hnrnpua	89	62.319	Danio_rerio
ENSCHIG00000004900	HNRNPU	80	100.000	ENSDNOG00000000215	HNRNPU	88	100.000	Dasypus_novemcinctus
ENSCHIG00000004900	HNRNPU	100	92.432	ENSDORG00000015491	Hnrnpu	100	92.432	Dipodomys_ordii
ENSCHIG00000004900	HNRNPU	100	94.293	ENSETEG00000014565	HNRNPU	100	93.672	Echinops_telfairi
ENSCHIG00000004900	HNRNPU	100	98.883	ENSEASG00005003017	HNRNPU	100	98.883	Equus_asinus_asinus
ENSCHIG00000004900	HNRNPU	100	98.635	ENSECAG00000007955	HNRNPU	100	98.635	Equus_caballus
ENSCHIG00000004900	HNRNPU	99	50.613	ENSELUG00000011966	hnrnpua	77	57.725	Esox_lucius
ENSCHIG00000004900	HNRNPU	70	62.957	ENSELUG00000010733	hnrnpub	68	62.333	Esox_lucius
ENSCHIG00000004900	HNRNPU	100	98.883	ENSFCAG00000002156	HNRNPU	99	98.883	Felis_catus
ENSCHIG00000004900	HNRNPU	89	98.960	ENSFDAG00000006026	HNRNPU	100	98.990	Fukomys_damarensis
ENSCHIG00000004900	HNRNPU	75	53.857	ENSFHEG00000022639	hnrnpub	81	55.136	Fundulus_heteroclitus
ENSCHIG00000004900	HNRNPU	74	58.466	ENSGMOG00000001755	hnrnpub	77	59.477	Gadus_morhua
ENSCHIG00000004900	HNRNPU	100	78.000	ENSGALG00000010671	HNRNPU	99	78.597	Gallus_gallus
ENSCHIG00000004900	HNRNPU	75	53.891	ENSGAFG00000009369	hnrnpub	79	55.793	Gambusia_affinis
ENSCHIG00000004900	HNRNPU	77	59.225	ENSGACG00000004679	hnrnpub	73	57.692	Gasterosteus_aculeatus
ENSCHIG00000004900	HNRNPU	100	97.146	ENSGGOG00000004061	HNRNPU	100	97.146	Gorilla_gorilla
ENSCHIG00000004900	HNRNPU	80	83.333	ENSHBUG00000012290	hnrnpub	85	83.333	Haplochromis_burtoni
ENSCHIG00000004900	HNRNPU	100	98.015	ENSHGLG00000010594	-	100	98.015	Heterocephalus_glaber_female
ENSCHIG00000004900	HNRNPU	82	99.328	ENSHGLG00100015093	HNRNPU	100	99.328	Heterocephalus_glaber_male
ENSCHIG00000004900	HNRNPU	69	57.886	ENSHCOG00000020091	hnrnpub	78	54.518	Hippocampus_comes
ENSCHIG00000004900	HNRNPU	73	78.261	ENSIPUG00000007749	hnrnpu	92	72.549	Ictalurus_punctatus
ENSCHIG00000004900	HNRNPU	100	94.196	ENSJJAG00000011371	Hnrnpu	100	94.196	Jaculus_jaculus
ENSCHIG00000004900	HNRNPU	75	55.000	ENSKMAG00000004532	hnrnpub	80	54.955	Kryptolebias_marmoratus
ENSCHIG00000004900	HNRNPU	75	56.018	ENSLBEG00000022520	hnrnpub	80	57.251	Labrus_bergylta
ENSCHIG00000004900	HNRNPU	99	62.654	ENSLACG00000017463	HNRNPU	99	62.299	Latimeria_chalumnae
ENSCHIG00000004900	HNRNPU	76	67.762	ENSLOCG00000016652	hnrnpua	75	67.585	Lepisosteus_oculatus
ENSCHIG00000004900	HNRNPU	100	96.898	ENSLAFG00000021377	HNRNPU	100	96.898	Loxodonta_africana
ENSCHIG00000004900	HNRNPU	100	97.519	ENSMFAG00000037308	HNRNPU	100	97.519	Macaca_fascicularis
ENSCHIG00000004900	HNRNPU	100	98.387	ENSMMUG00000021098	HNRNPU	100	98.387	Macaca_mulatta
ENSCHIG00000004900	HNRNPU	100	97.519	ENSMNEG00000043645	HNRNPU	100	97.519	Macaca_nemestrina
ENSCHIG00000004900	HNRNPU	75	57.761	ENSMAMG00000007196	hnrnpub	80	58.204	Mastacembelus_armatus
ENSCHIG00000004900	HNRNPU	80	83.333	ENSMZEG00005003185	hnrnpub	80	57.590	Maylandia_zebra
ENSCHIG00000004900	HNRNPU	100	96.278	ENSMAUG00000008842	Hnrnpu	100	96.278	Mesocricetus_auratus
ENSCHIG00000004900	HNRNPU	100	97.643	ENSMICG00000004616	HNRNPU	100	97.643	Microcebus_murinus
ENSCHIG00000004900	HNRNPU	100	96.154	ENSMOCG00000015623	Hnrnpu	100	96.154	Microtus_ochrogaster
ENSCHIG00000004900	HNRNPU	100	89.765	ENSMODG00000006515	HNRNPU	100	90.118	Monodelphis_domestica
ENSCHIG00000004900	HNRNPU	79	70.588	ENSMALG00000018243	hnrnpub	70	63.139	Monopterus_albus
ENSCHIG00000004900	HNRNPU	100	96.530	MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.530	Mus_caroli
ENSCHIG00000004900	HNRNPU	100	96.654	ENSMUSG00000039630	Hnrnpu	100	96.654	Mus_musculus
ENSCHIG00000004900	HNRNPU	100	95.792	MGP_PahariEiJ_G0028193	Hnrnpu	100	95.792	Mus_pahari
ENSCHIG00000004900	HNRNPU	100	96.654	MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.654	Mus_spretus
ENSCHIG00000004900	HNRNPU	100	89.975	ENSMLUG00000000475	HNRNPU	74	97.143	Myotis_lucifugus
ENSCHIG00000004900	HNRNPU	100	96.898	ENSNGAG00000019075	Hnrnpu	100	96.898	Nannospalax_galili
ENSCHIG00000004900	HNRNPU	80	83.333	ENSNBRG00000017855	hnrnpub	80	57.277	Neolamprologus_brichardi
ENSCHIG00000004900	HNRNPU	99	86.957	ENSMEUG00000000541	HNRNPU	100	87.319	Notamacropus_eugenii
ENSCHIG00000004900	HNRNPU	70	97.087	ENSODEG00000014458	-	100	97.087	Octodon_degus
ENSCHIG00000004900	HNRNPU	80	83.333	ENSONIG00000001260	hnrnpub	88	83.333	Oreochromis_niloticus
ENSCHIG00000004900	HNRNPU	99	96.078	ENSOCUG00000014469	HNRNPU	94	96.078	Oryctolagus_cuniculus
ENSCHIG00000004900	HNRNPU	75	57.910	ENSORLG00000016114	hnrnpub	79	56.782	Oryzias_latipes
ENSCHIG00000004900	HNRNPU	75	56.930	ENSORLG00020005363	hnrnpub	80	56.966	Oryzias_latipes_hni
ENSCHIG00000004900	HNRNPU	75	56.781	ENSORLG00015001190	hnrnpub	80	56.811	Oryzias_latipes_hsok
ENSCHIG00000004900	HNRNPU	75	56.399	ENSOMEG00000014951	hnrnpub	79	56.894	Oryzias_melastigma
ENSCHIG00000004900	HNRNPU	100	98.387	ENSOGAG00000014024	HNRNPU	100	98.387	Otolemur_garnettii
ENSCHIG00000004900	HNRNPU	82	100.000	ENSOARG00000004985	HNRNPU	91	99.664	Ovis_aries
ENSCHIG00000004900	HNRNPU	100	97.643	ENSPPAG00000038652	HNRNPU	100	97.643	Pan_paniscus
ENSCHIG00000004900	HNRNPU	100	96.606	ENSPPRG00000002662	HNRNPU	100	96.606	Panthera_pardus
ENSCHIG00000004900	HNRNPU	100	98.377	ENSPTRG00000002182	HNRNPU	100	98.377	Pan_troglodytes
ENSCHIG00000004900	HNRNPU	100	98.387	ENSPANG00000011643	HNRNPU	100	98.387	Papio_anubis
ENSCHIG00000004900	HNRNPU	74	66.351	ENSPKIG00000022332	hnrnpub	78	67.038	Paramormyrops_kingsleyae
ENSCHIG00000004900	HNRNPU	75	66.088	ENSPKIG00000006885	hnrnpua	78	66.560	Paramormyrops_kingsleyae
ENSCHIG00000004900	HNRNPU	99	92.777	ENSPCIG00000008657	HNRNPU	100	92.270	Phascolarctos_cinereus
ENSCHIG00000004900	HNRNPU	75	54.130	ENSPFOG00000002908	hnrnpub	80	55.793	Poecilia_formosa
ENSCHIG00000004900	HNRNPU	75	54.332	ENSPLAG00000004160	hnrnpub	80	55.963	Poecilia_latipinna
ENSCHIG00000004900	HNRNPU	100	97.772	ENSPCOG00000018655	-	100	97.772	Propithecus_coquereli
ENSCHIG00000004900	HNRNPU	100	94.169	ENSPCOG00000003883	-	100	94.169	Propithecus_coquereli
ENSCHIG00000004900	HNRNPU	100	96.485	ENSPVAG00000002581	HNRNPU	100	96.485	Pteropus_vampyrus
ENSCHIG00000004900	HNRNPU	80	83.333	ENSPNYG00000021642	hnrnpub	80	57.746	Pundamilia_nyererei
ENSCHIG00000004900	HNRNPU	99	56.257	ENSPNAG00000001055	hnrnpub	79	64.196	Pygocentrus_nattereri
ENSCHIG00000004900	HNRNPU	100	96.278	ENSRNOG00000033790	Hnrnpu	100	96.278	Rattus_norvegicus
ENSCHIG00000004900	HNRNPU	100	96.774	ENSRBIG00000031519	HNRNPU	100	96.774	Rhinopithecus_bieti
ENSCHIG00000004900	HNRNPU	100	98.139	ENSRROG00000041642	HNRNPU	100	98.139	Rhinopithecus_roxellana
ENSCHIG00000004900	HNRNPU	99	57.427	ENSSFOG00015001124	hnrnpub	76	66.935	Scleropages_formosus
ENSCHIG00000004900	HNRNPU	94	59.539	ENSSFOG00015019004	hnrnpu	77	67.468	Scleropages_formosus
ENSCHIG00000004900	HNRNPU	69	61.620	ENSSMAG00000003607	hnrnpub	77	57.975	Scophthalmus_maximus
ENSCHIG00000004900	HNRNPU	75	55.102	ENSSDUG00000005912	hnrnpub	79	56.437	Seriola_dumerili
ENSCHIG00000004900	HNRNPU	75	54.956	ENSSLDG00000004899	hnrnpub	79	56.287	Seriola_lalandi_dorsalis
ENSCHIG00000004900	HNRNPU	100	78.885	ENSSPUG00000011393	HNRNPU	100	78.810	Sphenodon_punctatus
ENSCHIG00000004900	HNRNPU	69	61.131	ENSSPAG00000011853	hnrnpub	80	58.514	Stegastes_partitus
ENSCHIG00000004900	HNRNPU	100	99.256	ENSSSCG00000010877	HNRNPU	100	99.256	Sus_scrofa
ENSCHIG00000004900	HNRNPU	75	57.698	ENSTRUG00000007759	hnrnpub	79	57.895	Takifugu_rubripes
ENSCHIG00000004900	HNRNPU	87	56.109	ENSTNIG00000009725	hnrnpub	90	68.085	Tetraodon_nigroviridis
ENSCHIG00000004900	HNRNPU	70	100.000	ENSTTRG00000005281	HNRNPU	71	100.000	Tursiops_truncatus
ENSCHIG00000004900	HNRNPU	100	96.727	ENSUAMG00000021120	HNRNPU	100	96.727	Ursus_americanus
ENSCHIG00000004900	HNRNPU	89	98.000	ENSUMAG00000012322	HNRNPU	99	94.643	Ursus_maritimus
ENSCHIG00000004900	HNRNPU	80	99.099	ENSVPAG00000010520	HNRNPU	91	99.099	Vicugna_pacos
ENSCHIG00000004900	HNRNPU	100	98.759	ENSVVUG00000026524	HNRNPU	100	98.759	Vulpes_vulpes
ENSCHIG00000004900	HNRNPU	99	67.354	ENSXETG00000011386	hnrnpu	99	69.719	Xenopus_tropicalis
ENSCHIG00000004900	HNRNPU	75	54.185	ENSXMAG00000010356	hnrnpub	80	56.098	Xiphophorus_maculatus