EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000005451 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 3741 bases
Position: chr25:2553624-2557364
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000002354	zf-C2H2	PF00096.26	6.9e-22	1	3
ENSCHIP00000002354	zf-C2H2	PF00096.26	6.9e-22	2	3
ENSCHIP00000002354	zf-C2H2	PF00096.26	6.9e-22	3	3
ENSCHIP00000002354	zf-met	PF12874.7	0.00041	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000007335	-	1008	-	ENSCHIP00000002354	335 (aa)	-	UPI000D18E0E0

Gene Model

Click here to download ENSCHIG00000005451's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000005451's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000005451	-	70	45.985	ENSCHIG00000020931	-	86	45.985
ENSCHIG00000005451	-	60	49.123	ENSCHIG00000015281	ZFP1	84	49.123
ENSCHIG00000005451	-	52	42.143	ENSCHIG00000016562	-	74	42.143
ENSCHIG00000005451	-	60	45.763	ENSCHIG00000015741	-	86	45.763
ENSCHIG00000005451	-	52	46.715	ENSCHIG00000008992	-	91	46.715
ENSCHIG00000005451	-	51	54.217	ENSCHIG00000015369	ZNF317	71	54.217
ENSCHIG00000005451	-	73	44.604	ENSCHIG00000026799	ZNF202	52	44.604
ENSCHIG00000005451	-	68	43.796	ENSCHIG00000020779	-	89	43.796
ENSCHIG00000005451	-	59	51.190	ENSCHIG00000027113	ZNF699	77	51.190
ENSCHIG00000005451	-	62	56.164	ENSCHIG00000026481	-	82	48.175
ENSCHIG00000005451	-	64	40.000	ENSCHIG00000011632	ZBTB41	50	40.000
ENSCHIG00000005451	-	57	48.148	ENSCHIG00000012483	ZNF2	68	48.148

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000005451	-	71	84.519	ENSCAFG00000031888	ZNF200	59	84.519	Canis_familiaris
ENSCHIG00000005451	-	71	84.519	ENSCAFG00020025815	ZNF200	59	84.519	Canis_lupus_dingo
ENSCHIG00000005451	-	71	83.682	ENSCCAG00000023518	ZNF200	68	83.682	Cebus_capucinus
ENSCHIG00000005451	-	73	82.377	ENSCHOG00000006590	ZNF200	62	82.377	Choloepus_hoffmanni
ENSCHIG00000005451	-	73	84.016	ENSDNOG00000042651	ZNF200	60	84.016	Dasypus_novemcinctus
ENSCHIG00000005451	-	73	86.885	ENSECAG00000007791	ZNF200	60	86.885	Equus_caballus
ENSCHIG00000005451	-	73	70.492	ENSHGLG00000007477	ZNF200	56	75.463	Heterocephalus_glaber_female
ENSCHIG00000005451	-	73	70.492	ENSHGLG00100003359	ZNF200	56	75.463	Heterocephalus_glaber_male
ENSCHIG00000005451	-	71	86.611	ENSMLEG00000038087	ZNF200	61	86.611	Mandrillus_leucophaeus
ENSCHIG00000005451	-	71	81.513	ENSPCAG00000015754	ZNF200	60	81.513	Procavia_capensis
ENSCHIG00000005451	-	71	84.100	ENSSBOG00000029594	ZNF200	61	84.100	Saimiri_boliviensis_boliviensis
ENSCHIG00000005451	-	73	88.934	ENSTTRG00000011655	ZNF200	62	88.934	Tursiops_truncatus
ENSCHIG00000005451	-	71	83.682	ENSVVUG00000008256	ZNF200	59	83.682	Vulpes_vulpes