EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000005557 (Gene tree)
Gene ID: 102191007
Gene Symbol: SNRPD1
Alias: HsT2456|SNRPD|Sm-D1
Full Name: small nuclear ribonucleoprotein D1 polypeptide
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 3923 bases
Position: chr24:34950388-34954310
Accession: 102191007
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000002388	LSM	PF01423.22	7.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000007463	SNRPD1-201	360	XM_018039587	ENSCHIP00000002388	119 (aa)	XP_017895076	UPI000D195B3F

Gene Model

Click here to download ENSCHIG00000005557's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03040	Spliceosome	KEGG
chx05322	Systemic lupus erythematosus	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000005557's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000005557	SNRPD1	100	97.479	ENSG00000167088	SNRPD1	100	100.000	Homo_sapiens
ENSCHIG00000005557	SNRPD1	92	95.455	ENSAPOG00000019446	snrpd1	60	95.455	Acanthochromis_polyacanthus
ENSCHIG00000005557	SNRPD1	98	99.145	ENSAMEG00000002576	SNRPD1	100	99.145	Ailuropoda_melanoleuca
ENSCHIG00000005557	SNRPD1	94	96.429	ENSACIG00000011263	snrpd1	100	96.429	Amphilophus_citrinellus
ENSCHIG00000005557	SNRPD1	92	95.455	ENSAOCG00000007406	snrpd1	94	93.750	Amphiprion_ocellaris
ENSCHIG00000005557	SNRPD1	92	90.909	ENSAPEG00000014961	snrpd1	94	89.286	Amphiprion_percula
ENSCHIG00000005557	SNRPD1	94	96.429	ENSAPEG00000012539	SNRPD1	100	96.429	Amphiprion_percula
ENSCHIG00000005557	SNRPD1	94	96.429	ENSATEG00000014399	snrpd1	100	96.429	Anabas_testudineus
ENSCHIG00000005557	SNRPD1	100	96.639	ENSAPLG00000012256	SNRPD1	100	96.639	Anas_platyrhynchos
ENSCHIG00000005557	SNRPD1	100	97.479	ENSACAG00000006364	SNRPD1	100	97.479	Anolis_carolinensis
ENSCHIG00000005557	SNRPD1	100	97.479	ENSANAG00000025641	SNRPD1	100	97.479	Aotus_nancymaae
ENSCHIG00000005557	SNRPD1	94	96.429	ENSACLG00000017406	snrpd1	100	96.429	Astatotilapia_calliptera
ENSCHIG00000005557	SNRPD1	100	94.958	ENSAMXG00000004589	snrpd1	100	94.958	Astyanax_mexicanus
ENSCHIG00000005557	SNRPD1	92	96.364	ENSBTAG00000047266	-	92	96.364	Bos_taurus
ENSCHIG00000005557	SNRPD1	79	94.681	ENSBTAG00000055316	-	81	94.681	Bos_taurus
ENSCHIG00000005557	SNRPD1	79	96.809	ENSBTAG00000012376	-	72	94.792	Bos_taurus
ENSCHIG00000005557	SNRPD1	100	97.479	ENSBTAG00000008292	SNRPD1	100	97.479	Bos_taurus
ENSCHIG00000005557	SNRPD1	72	79.070	WBGene00004916	snr-3	76	72.917	Caenorhabditis_elegans
ENSCHIG00000005557	SNRPD1	100	97.479	ENSCJAG00000042955	SNRPD1	100	97.479	Callithrix_jacchus
ENSCHIG00000005557	SNRPD1	100	97.479	ENSCAFG00000018247	SNRPD1	100	97.479	Canis_familiaris
ENSCHIG00000005557	SNRPD1	78	98.925	ENSCAFG00020015914	SNRPD1	73	98.925	Canis_lupus_dingo
ENSCHIG00000005557	SNRPD1	100	97.479	ENSTSYG00000030028	SNRPD1	100	97.479	Carlito_syrichta
ENSCHIG00000005557	SNRPD1	97	98.276	ENSCAPG00000008103	SNRPD1	100	98.276	Cavia_aperea
ENSCHIG00000005557	SNRPD1	100	97.479	ENSCPOG00000004679	SNRPD1	100	98.276	Cavia_porcellus
ENSCHIG00000005557	SNRPD1	100	97.479	ENSCCAG00000032658	SNRPD1	100	97.479	Cebus_capucinus
ENSCHIG00000005557	SNRPD1	92	95.455	ENSCCAG00000016652	-	94	93.750	Cebus_capucinus
ENSCHIG00000005557	SNRPD1	100	96.639	ENSCCAG00000020611	-	100	96.639	Cebus_capucinus
ENSCHIG00000005557	SNRPD1	79	94.681	ENSCCAG00000005390	-	81	92.708	Cebus_capucinus
ENSCHIG00000005557	SNRPD1	100	97.479	ENSCATG00000039978	SNRPD1	100	97.479	Cercocebus_atys
ENSCHIG00000005557	SNRPD1	100	97.479	ENSCLAG00000008691	SNRPD1	100	97.479	Chinchilla_lanigera
ENSCHIG00000005557	SNRPD1	100	97.479	ENSCSAG00000017654	SNRPD1	100	97.479	Chlorocebus_sabaeus
ENSCHIG00000005557	SNRPD1	100	97.479	ENSCPBG00000023143	SNRPD1	100	97.479	Chrysemys_picta_bellii
ENSCHIG00000005557	SNRPD1	71	86.905	ENSCING00000024100	-	67	86.905	Ciona_intestinalis
ENSCHIG00000005557	SNRPD1	71	84.706	ENSCSAVG00000004578	-	68	84.706	Ciona_savignyi
ENSCHIG00000005557	SNRPD1	79	74.468	ENSCGRG00001009945	-	85	72.917	Cricetulus_griseus_chok1gshd
ENSCHIG00000005557	SNRPD1	100	97.479	ENSCGRG00001021055	-	100	97.479	Cricetulus_griseus_chok1gshd
ENSCHIG00000005557	SNRPD1	79	74.468	ENSCGRG00000006224	-	85	72.917	Cricetulus_griseus_crigri
ENSCHIG00000005557	SNRPD1	100	97.479	ENSCGRG00000000490	-	100	97.479	Cricetulus_griseus_crigri
ENSCHIG00000005557	SNRPD1	78	93.548	ENSCSEG00000018141	snrpd1	81	91.667	Cynoglossus_semilaevis
ENSCHIG00000005557	SNRPD1	92	95.455	ENSCVAG00000000534	snrpd1	94	93.750	Cyprinodon_variegatus
ENSCHIG00000005557	SNRPD1	100	94.958	ENSDARG00000011648	snrpd1	100	94.958	Danio_rerio
ENSCHIG00000005557	SNRPD1	100	97.479	ENSDNOG00000040310	SNRPD1	100	97.479	Dasypus_novemcinctus
ENSCHIG00000005557	SNRPD1	100	97.479	ENSDORG00000008349	Snrpd1	100	97.479	Dipodomys_ordii
ENSCHIG00000005557	SNRPD1	77	81.522	FBgn0261933	SmD1	76	79.787	Drosophila_melanogaster
ENSCHIG00000005557	SNRPD1	74	100.000	ENSETEG00000011689	SNRPD1	74	100.000	Echinops_telfairi
ENSCHIG00000005557	SNRPD1	92	91.818	ENSEBUG00000003170	snrpd1	94	90.179	Eptatretus_burgeri
ENSCHIG00000005557	SNRPD1	94	100.000	ENSEASG00005002433	SNRPD1	100	100.000	Equus_asinus_asinus
ENSCHIG00000005557	SNRPD1	94	100.000	ENSECAG00000014373	SNRPD1	100	100.000	Equus_caballus
ENSCHIG00000005557	SNRPD1	75	100.000	ENSEEUG00000004987	SNRPD1	100	100.000	Erinaceus_europaeus
ENSCHIG00000005557	SNRPD1	92	84.404	ENSELUG00000000088	snrpd1	79	92.553	Esox_lucius
ENSCHIG00000005557	SNRPD1	100	97.479	ENSFCAG00000012352	SNRPD1	100	97.479	Felis_catus
ENSCHIG00000005557	SNRPD1	94	100.000	ENSFALG00000002646	SNRPD1	100	100.000	Ficedula_albicollis
ENSCHIG00000005557	SNRPD1	100	94.958	ENSGMOG00000015607	snrpd1	100	94.958	Gadus_morhua
ENSCHIG00000005557	SNRPD1	100	97.479	ENSGALG00000041334	SNRPD1	100	97.479	Gallus_gallus
ENSCHIG00000005557	SNRPD1	92	95.455	ENSGAFG00000011171	snrpd1	94	93.750	Gambusia_affinis
ENSCHIG00000005557	SNRPD1	100	94.958	ENSGACG00000005201	SNRPD1	100	94.958	Gasterosteus_aculeatus
ENSCHIG00000005557	SNRPD1	100	97.479	ENSGAGG00000011197	SNRPD1	100	97.479	Gopherus_agassizii
ENSCHIG00000005557	SNRPD1	100	97.479	ENSGGOG00000041053	SNRPD1	100	97.479	Gorilla_gorilla
ENSCHIG00000005557	SNRPD1	79	93.617	ENSGGOG00000026706	-	80	91.667	Gorilla_gorilla
ENSCHIG00000005557	SNRPD1	92	95.455	ENSHBUG00000003236	snrpd1	94	93.750	Haplochromis_burtoni
ENSCHIG00000005557	SNRPD1	100	97.479	ENSHGLG00000007152	SNRPD1	100	97.479	Heterocephalus_glaber_female
ENSCHIG00000005557	SNRPD1	100	97.479	ENSHGLG00100008618	SNRPD1	100	97.479	Heterocephalus_glaber_male
ENSCHIG00000005557	SNRPD1	92	95.455	ENSIPUG00000003576	snrpd1	94	93.750	Ictalurus_punctatus
ENSCHIG00000005557	SNRPD1	100	97.479	ENSSTOG00000000485	SNRPD1	100	97.479	Ictidomys_tridecemlineatus
ENSCHIG00000005557	SNRPD1	100	97.479	ENSJJAG00000017698	Snrpd1	100	97.479	Jaculus_jaculus
ENSCHIG00000005557	SNRPD1	92	95.455	ENSKMAG00000005987	snrpd1	94	93.750	Kryptolebias_marmoratus
ENSCHIG00000005557	SNRPD1	92	95.455	ENSLBEG00000003327	snrpd1	94	93.750	Labrus_bergylta
ENSCHIG00000005557	SNRPD1	100	98.319	ENSLACG00000001955	SNRPD1	100	97.479	Latimeria_chalumnae
ENSCHIG00000005557	SNRPD1	98	97.436	ENSLOCG00000002003	snrpd1	100	97.436	Lepisosteus_oculatus
ENSCHIG00000005557	SNRPD1	98	100.000	ENSLAFG00000005819	SNRPD1	99	100.000	Loxodonta_africana
ENSCHIG00000005557	SNRPD1	100	97.479	ENSMFAG00000042080	SNRPD1	100	97.479	Macaca_fascicularis
ENSCHIG00000005557	SNRPD1	96	100.000	ENSMMUG00000003992	SNRPD1	97	100.000	Macaca_mulatta
ENSCHIG00000005557	SNRPD1	100	97.479	ENSMNEG00000041296	SNRPD1	100	97.479	Macaca_nemestrina
ENSCHIG00000005557	SNRPD1	100	97.479	ENSMLEG00000028659	SNRPD1	100	97.479	Mandrillus_leucophaeus
ENSCHIG00000005557	SNRPD1	92	95.455	ENSMAMG00000012971	snrpd1	94	93.750	Mastacembelus_armatus
ENSCHIG00000005557	SNRPD1	92	95.455	ENSMZEG00005004685	snrpd1	94	93.750	Maylandia_zebra
ENSCHIG00000005557	SNRPD1	100	98.333	ENSMGAG00000011598	SNRPD1	99	98.333	Meleagris_gallopavo
ENSCHIG00000005557	SNRPD1	79	82.979	ENSMAUG00000016502	-	86	81.250	Mesocricetus_auratus
ENSCHIG00000005557	SNRPD1	79	82.979	ENSMAUG00000016467	-	86	81.250	Mesocricetus_auratus
ENSCHIG00000005557	SNRPD1	83	93.939	ENSMAUG00000006829	-	63	93.939	Mesocricetus_auratus
ENSCHIG00000005557	SNRPD1	100	97.479	ENSMICG00000044066	SNRPD1	100	97.479	Microcebus_murinus
ENSCHIG00000005557	SNRPD1	100	97.479	ENSMOCG00000017367	Snrpd1	100	97.479	Microtus_ochrogaster
ENSCHIG00000005557	SNRPD1	92	95.455	ENSMMOG00000019089	snrpd1	94	93.750	Mola_mola
ENSCHIG00000005557	SNRPD1	100	97.479	ENSMODG00000021487	SNRPD1	98	100.000	Monodelphis_domestica
ENSCHIG00000005557	SNRPD1	92	95.455	ENSMALG00000014459	snrpd1	94	93.750	Monopterus_albus
ENSCHIG00000005557	SNRPD1	100	97.479	MGP_CAROLIEiJ_G0021994	Snrpd1	100	97.479	Mus_caroli
ENSCHIG00000005557	SNRPD1	100	97.479	ENSMUSG00000002477	Snrpd1	100	97.479	Mus_musculus
ENSCHIG00000005557	SNRPD1	100	97.479	MGP_PahariEiJ_G0018731	Snrpd1	100	97.479	Mus_pahari
ENSCHIG00000005557	SNRPD1	100	97.479	MGP_SPRETEiJ_G0022910	Snrpd1	100	97.479	Mus_spretus
ENSCHIG00000005557	SNRPD1	100	96.639	ENSMPUG00000020041	-	100	96.639	Mustela_putorius_furo
ENSCHIG00000005557	SNRPD1	98	99.145	ENSMPUG00000005567	-	100	99.145	Mustela_putorius_furo
ENSCHIG00000005557	SNRPD1	98	98.291	ENSMLUG00000009124	SNRPD1	91	98.291	Myotis_lucifugus
ENSCHIG00000005557	SNRPD1	100	97.479	ENSNGAG00000023946	Snrpd1	100	97.479	Nannospalax_galili
ENSCHIG00000005557	SNRPD1	77	94.565	ENSNBRG00000012119	snrpd1	76	94.565	Neolamprologus_brichardi
ENSCHIG00000005557	SNRPD1	100	94.958	ENSNLEG00000031430	SNRPD1	100	94.958	Nomascus_leucogenys
ENSCHIG00000005557	SNRPD1	100	97.479	ENSODEG00000005764	SNRPD1	100	97.479	Octodon_degus
ENSCHIG00000005557	SNRPD1	92	95.455	ENSONIG00000002486	snrpd1	94	93.750	Oreochromis_niloticus
ENSCHIG00000005557	SNRPD1	82	88.776	ENSOANG00000004638	-	82	88.776	Ornithorhynchus_anatinus
ENSCHIG00000005557	SNRPD1	98	99.145	ENSOCUG00000023761	-	100	99.145	Oryctolagus_cuniculus
ENSCHIG00000005557	SNRPD1	98	98.291	ENSOCUG00000014399	-	98	98.291	Oryctolagus_cuniculus
ENSCHIG00000005557	SNRPD1	94	96.429	ENSORLG00000012516	snrpd1	100	96.429	Oryzias_latipes
ENSCHIG00000005557	SNRPD1	92	95.455	ENSORLG00020005743	snrpd1	94	93.750	Oryzias_latipes_hni
ENSCHIG00000005557	SNRPD1	92	95.455	ENSORLG00015013402	snrpd1	94	93.750	Oryzias_latipes_hsok
ENSCHIG00000005557	SNRPD1	92	95.455	ENSOMEG00000011571	snrpd1	94	93.750	Oryzias_melastigma
ENSCHIG00000005557	SNRPD1	100	96.639	ENSOGAG00000007833	SNRPD1	100	96.639	Otolemur_garnettii
ENSCHIG00000005557	SNRPD1	100	92.437	ENSOARG00000003413	-	85	92.437	Ovis_aries
ENSCHIG00000005557	SNRPD1	100	97.479	ENSPPAG00000042593	SNRPD1	100	97.479	Pan_paniscus
ENSCHIG00000005557	SNRPD1	92	70.909	ENSPPRG00000005009	-	92	69.643	Panthera_pardus
ENSCHIG00000005557	SNRPD1	100	97.479	ENSPPRG00000002399	SNRPD1	100	97.479	Panthera_pardus
ENSCHIG00000005557	SNRPD1	96	100.000	ENSPTIG00000013206	SNRPD1	100	100.000	Panthera_tigris_altaica
ENSCHIG00000005557	SNRPD1	100	97.479	ENSPTRG00000009909	SNRPD1	100	97.479	Pan_troglodytes
ENSCHIG00000005557	SNRPD1	84	93.000	ENSPTRG00000050159	-	87	91.176	Pan_troglodytes
ENSCHIG00000005557	SNRPD1	100	97.479	ENSPANG00000023478	SNRPD1	100	97.479	Papio_anubis
ENSCHIG00000005557	SNRPD1	100	94.958	ENSPKIG00000003985	SNRPD1	100	94.958	Paramormyrops_kingsleyae
ENSCHIG00000005557	SNRPD1	88	95.238	ENSPKIG00000021610	snrpd1	94	95.238	Paramormyrops_kingsleyae
ENSCHIG00000005557	SNRPD1	92	95.455	ENSPMGG00000001862	snrpd1	94	93.750	Periophthalmus_magnuspinnatus
ENSCHIG00000005557	SNRPD1	100	97.479	ENSPEMG00000014773	-	100	97.479	Peromyscus_maniculatus_bairdii
ENSCHIG00000005557	SNRPD1	84	82.353	ENSPMAG00000003938	-	85	80.769	Petromyzon_marinus
ENSCHIG00000005557	SNRPD1	100	97.479	ENSPCIG00000020320	SNRPD1	100	100.000	Phascolarctos_cinereus
ENSCHIG00000005557	SNRPD1	79	94.681	ENSPFOG00000012448	SNRPD1	85	92.708	Poecilia_formosa
ENSCHIG00000005557	SNRPD1	79	94.681	ENSPLAG00000006738	snrpd1	85	92.708	Poecilia_latipinna
ENSCHIG00000005557	SNRPD1	79	94.681	ENSPMEG00000021942	snrpd1	85	92.708	Poecilia_mexicana
ENSCHIG00000005557	SNRPD1	92	95.455	ENSPREG00000007094	snrpd1	94	93.750	Poecilia_reticulata
ENSCHIG00000005557	SNRPD1	100	97.479	ENSPPYG00000025874	SNRPD1	100	97.479	Pongo_abelii
ENSCHIG00000005557	SNRPD1	100	97.479	ENSPCOG00000013327	SNRPD1	100	97.479	Propithecus_coquereli
ENSCHIG00000005557	SNRPD1	98	99.145	ENSPVAG00000005511	SNRPD1	79	99.145	Pteropus_vampyrus
ENSCHIG00000005557	SNRPD1	92	95.455	ENSPNAG00000017824	snrpd1	94	93.750	Pygocentrus_nattereri
ENSCHIG00000005557	SNRPD1	100	97.479	ENSRNOG00000013714	Snrpd1	100	97.479	Rattus_norvegicus
ENSCHIG00000005557	SNRPD1	100	97.479	ENSRBIG00000022996	SNRPD1	100	97.479	Rhinopithecus_bieti
ENSCHIG00000005557	SNRPD1	100	97.479	ENSRROG00000027640	SNRPD1	100	97.479	Rhinopithecus_roxellana
ENSCHIG00000005557	SNRPD1	100	97.479	ENSSBOG00000020998	SNRPD1	100	97.479	Saimiri_boliviensis_boliviensis
ENSCHIG00000005557	SNRPD1	100	97.479	ENSSHAG00000011791	SNRPD1	100	97.479	Sarcophilus_harrisii
ENSCHIG00000005557	SNRPD1	92	94.545	ENSSFOG00015022253	-	94	92.857	Scleropages_formosus
ENSCHIG00000005557	SNRPD1	92	94.545	ENSSFOG00015008809	-	94	92.857	Scleropages_formosus
ENSCHIG00000005557	SNRPD1	92	94.545	ENSSMAG00000008765	snrpd1	94	95.238	Scophthalmus_maximus
ENSCHIG00000005557	SNRPD1	91	95.370	ENSSDUG00000010521	snrpd1	92	95.370	Seriola_dumerili
ENSCHIG00000005557	SNRPD1	92	95.455	ENSSLDG00000011858	snrpd1	94	93.750	Seriola_lalandi_dorsalis
ENSCHIG00000005557	SNRPD1	56	100.000	ENSSARG00000004271	SNRPD1	100	100.000	Sorex_araneus
ENSCHIG00000005557	SNRPD1	100	97.479	ENSSPUG00000002824	SNRPD1	100	97.479	Sphenodon_punctatus
ENSCHIG00000005557	SNRPD1	94	96.429	ENSSPAG00000015229	snrpd1	100	96.429	Stegastes_partitus
ENSCHIG00000005557	SNRPD1	100	97.479	ENSSSCG00000003701	SNRPD1	100	100.000	Sus_scrofa
ENSCHIG00000005557	SNRPD1	100	96.639	ENSTGUG00000005095	SNRPD1	100	96.639	Taeniopygia_guttata
ENSCHIG00000005557	SNRPD1	94	96.429	ENSTRUG00000008977	snrpd1	100	96.429	Takifugu_rubripes
ENSCHIG00000005557	SNRPD1	81	91.667	ENSTNIG00000001224	snrpd1	92	91.667	Tetraodon_nigroviridis
ENSCHIG00000005557	SNRPD1	74	100.000	ENSTBEG00000013776	SNRPD1	100	100.000	Tupaia_belangeri
ENSCHIG00000005557	SNRPD1	97	100.000	ENSTTRG00000002654	SNRPD1	100	100.000	Tursiops_truncatus
ENSCHIG00000005557	SNRPD1	96	100.000	ENSUAMG00000013431	SNRPD1	97	100.000	Ursus_americanus
ENSCHIG00000005557	SNRPD1	100	97.479	ENSUMAG00000019740	SNRPD1	100	97.479	Ursus_maritimus
ENSCHIG00000005557	SNRPD1	98	99.145	ENSVPAG00000010056	SNRPD1	79	99.145	Vicugna_pacos
ENSCHIG00000005557	SNRPD1	94	100.000	ENSVVUG00000004009	SNRPD1	100	100.000	Vulpes_vulpes
ENSCHIG00000005557	SNRPD1	100	95.798	ENSXETG00000027354	snrpd1	100	95.798	Xenopus_tropicalis
ENSCHIG00000005557	SNRPD1	92	95.455	ENSXCOG00000020108	snrpd1	94	93.750	Xiphophorus_couchianus
ENSCHIG00000005557	SNRPD1	92	95.455	ENSXMAG00000003368	snrpd1	94	93.750	Xiphophorus_maculatus