EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000006275 (Gene tree)
Gene ID: 102178564
Gene Symbol: DDX52
Alias: ROK1
Full Name: DExD-box helicase 52
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 22348 bases
Position: chr19:13533073-13555420
Accession: 102178564
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000002851	ResIII	PF04851.15	0.0001	1	1
ENSCHIP00000002842	ResIII	PF04851.15	0.00011	1	1
ENSCHIP00000002813	ResIII	PF04851.15	0.00011	1	1
ENSCHIP00000002851	DEAD	PF00270.29	6.5e-38	1	1
ENSCHIP00000002813	DEAD	PF00270.29	6.6e-38	1	1
ENSCHIP00000002842	DEAD	PF00270.29	7.3e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000008862	DDX52-203	1746	-	ENSCHIP00000002851	581 (aa)	-	UPI000D18F2A6
ENSCHIT00000008800	DDX52-201	1932	XM_005693163	ENSCHIP00000002813	598 (aa)	XP_005693220	UPI000846E89B
ENSCHIT00000008851	DDX52-202	1788	-	ENSCHIP00000002842	595 (aa)	-	UPI000D1910D0

Gene Model

Click here to download ENSCHIG00000006275's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000006275's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000006275	DDX52	72	33.255	ENSCHIG00000017351	-	64	33.255
ENSCHIG00000006275	DDX52	65	31.442	ENSCHIG00000014261	DDX56	76	31.517
ENSCHIG00000006275	DDX52	76	32.819	ENSCHIG00000020582	-	70	32.952
ENSCHIG00000006275	DDX52	68	31.807	ENSCHIG00000024903	-	61	31.807
ENSCHIG00000006275	DDX52	61	33.521	ENSCHIG00000012317	EIF4A2	89	30.838
ENSCHIG00000006275	DDX52	70	30.216	ENSCHIG00000021332	DDX17	55	30.340
ENSCHIG00000006275	DDX52	61	41.071	ENSCHIG00000011046	DDX1	56	41.071
ENSCHIG00000006275	DDX52	65	30.933	ENSCHIG00000026114	DDX6	76	30.933
ENSCHIG00000006275	DDX52	68	31.818	ENSCHIG00000010585	-	61	31.818
ENSCHIG00000006275	DDX52	71	30.493	ENSCHIG00000018783	DDX23	53	30.493
ENSCHIG00000006275	DDX52	68	31.204	ENSCHIG00000011800	DDX5	64	31.204
ENSCHIG00000006275	DDX52	65	30.729	ENSCHIG00000007753	DDX27	50	30.729
ENSCHIG00000006275	DDX52	70	31.100	ENSCHIG00000019280	DDX18	57	31.842
ENSCHIG00000006275	DDX52	70	30.969	ENSCHIG00000009756	DDX41	66	30.969
ENSCHIG00000006275	DDX52	62	32.597	ENSCHIG00000022153	EIF4A1	87	32.312
ENSCHIG00000006275	DDX52	73	33.333	ENSCHIG00000014558	DDX59	65	33.894
ENSCHIG00000006275	DDX52	68	33.741	ENSCHIG00000015567	DDX4	56	34.230
ENSCHIG00000006275	DDX52	60	32.194	ENSCHIG00000026011	DDX47	74	32.194

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000006275	DDX52	100	92.943	ENSG00000278053	DDX52	99	93.860	Homo_sapiens
ENSCHIG00000006275	DDX52	99	62.312	ENSAPOG00000008759	ddx52	90	60.669	Acanthochromis_polyacanthus
ENSCHIG00000006275	DDX52	100	93.976	ENSAMEG00000013159	DDX52	100	93.990	Ailuropoda_melanoleuca
ENSCHIG00000006275	DDX52	94	63.571	ENSACIG00000002843	ddx52	99	64.654	Amphilophus_citrinellus
ENSCHIG00000006275	DDX52	99	60.870	ENSAOCG00000007983	ddx52	91	59.464	Amphiprion_ocellaris
ENSCHIG00000006275	DDX52	99	60.870	ENSAOCG00000000356	-	88	60.582	Amphiprion_ocellaris
ENSCHIG00000006275	DDX52	99	60.870	ENSAPEG00000023456	ddx52	88	60.420	Amphiprion_percula
ENSCHIG00000006275	DDX52	99	63.484	ENSATEG00000021525	ddx52	90	62.359	Anabas_testudineus
ENSCHIG00000006275	DDX52	83	77.113	ENSACAG00000006395	DDX52	96	75.952	Anolis_carolinensis
ENSCHIG00000006275	DDX52	100	92.943	ENSANAG00000028587	DDX52	100	92.487	Aotus_nancymaae
ENSCHIG00000006275	DDX52	100	61.046	ENSACLG00000021447	ddx52	97	59.935	Astatotilapia_calliptera
ENSCHIG00000006275	DDX52	98	63.729	ENSAMXG00000024377	ddx52	99	63.430	Astyanax_mexicanus
ENSCHIG00000006275	DDX52	100	97.762	ENSBTAG00000010313	DDX52	100	97.659	Bos_taurus
ENSCHIG00000006275	DDX52	78	42.038	WBGene00011032	R05D11.4	81	40.319	Caenorhabditis_elegans
ENSCHIG00000006275	DDX52	100	92.083	ENSCJAG00000015190	DDX52	100	91.653	Callithrix_jacchus
ENSCHIG00000006275	DDX52	100	95.009	ENSCAFG00000013554	-	100	94.157	Canis_familiaris
ENSCHIG00000006275	DDX52	100	94.340	ENSCAFG00000018145	-	100	93.677	Canis_familiaris
ENSCHIG00000006275	DDX52	99	94.991	ENSCAFG00020003753	DDX52	98	94.819	Canis_lupus_dingo
ENSCHIG00000006275	DDX52	100	92.771	ENSTSYG00000002996	DDX52	100	92.154	Carlito_syrichta
ENSCHIG00000006275	DDX52	92	74.254	ENSCAPG00000010436	DDX52	100	73.105	Cavia_aperea
ENSCHIG00000006275	DDX52	100	91.394	ENSCPOG00000001232	DDX52	100	90.651	Cavia_porcellus
ENSCHIG00000006275	DDX52	100	93.287	ENSCCAG00000023213	DDX52	100	92.654	Cebus_capucinus
ENSCHIG00000006275	DDX52	100	93.976	ENSCATG00000041437	DDX52	100	93.656	Cercocebus_atys
ENSCHIG00000006275	DDX52	100	92.255	ENSCLAG00000016292	DDX52	100	91.639	Chinchilla_lanigera
ENSCHIG00000006275	DDX52	100	93.460	ENSCSAG00000006122	DDX52	100	93.155	Chlorocebus_sabaeus
ENSCHIG00000006275	DDX52	72	96.512	ENSCHOG00000007413	DDX52	73	93.684	Choloepus_hoffmanni
ENSCHIG00000006275	DDX52	99	75.456	ENSCPBG00000009806	DDX52	98	73.600	Chrysemys_picta_bellii
ENSCHIG00000006275	DDX52	76	51.641	ENSCING00000016218	-	99	51.055	Ciona_intestinalis
ENSCHIG00000006275	DDX52	66	54.987	ENSCSAVG00000003835	-	98	54.523	Ciona_savignyi
ENSCHIG00000006275	DDX52	100	93.115	ENSCANG00000035140	DDX52	100	92.821	Colobus_angolensis_palliatus
ENSCHIG00000006275	DDX52	100	89.708	ENSCGRG00001020695	Ddx52	99	90.051	Cricetulus_griseus_chok1gshd
ENSCHIG00000006275	DDX52	100	89.537	ENSCGRG00000008830	Ddx52	99	89.882	Cricetulus_griseus_crigri
ENSCHIG00000006275	DDX52	99	60.535	ENSCSEG00000010008	ddx52	89	61.538	Cynoglossus_semilaevis
ENSCHIG00000006275	DDX52	99	63.731	ENSCVAG00000005302	ddx52	99	64.116	Cyprinodon_variegatus
ENSCHIG00000006275	DDX52	99	64.494	ENSDARG00000100505	ddx52	99	63.427	Danio_rerio
ENSCHIG00000006275	DDX52	100	92.427	ENSDNOG00000047454	DDX52	100	90.864	Dasypus_novemcinctus
ENSCHIG00000006275	DDX52	100	91.050	ENSDORG00000004276	Ddx52	99	90.388	Dipodomys_ordii
ENSCHIG00000006275	DDX52	74	54.524	FBgn0036754	CG5589	88	46.667	Drosophila_melanogaster
ENSCHIG00000006275	DDX52	99	83.249	ENSETEG00000016042	DDX52	99	83.080	Echinops_telfairi
ENSCHIG00000006275	DDX52	65	42.785	ENSEBUG00000010838	-	91	43.577	Eptatretus_burgeri
ENSCHIG00000006275	DDX52	100	94.664	ENSEASG00005011275	DDX52	91	94.585	Equus_asinus_asinus
ENSCHIG00000006275	DDX52	100	95.009	ENSECAG00000012286	DDX52	100	94.491	Equus_caballus
ENSCHIG00000006275	DDX52	74	100.000	ENSEEUG00000001153	DDX52	80	89.976	Erinaceus_europaeus
ENSCHIG00000006275	DDX52	94	64.716	ENSELUG00000018002	ddx52	99	64.884	Esox_lucius
ENSCHIG00000006275	DDX52	100	94.492	ENSFCAG00000010573	DDX52	100	94.157	Felis_catus
ENSCHIG00000006275	DDX52	99	73.162	ENSFALG00000005155	DDX52	97	72.589	Ficedula_albicollis
ENSCHIG00000006275	DDX52	100	90.361	ENSFDAG00000008340	-	100	89.850	Fukomys_damarensis
ENSCHIG00000006275	DDX52	100	80.895	ENSFDAG00000011133	-	100	79.867	Fukomys_damarensis
ENSCHIG00000006275	DDX52	99	62.287	ENSFHEG00000017239	ddx52	91	62.226	Fundulus_heteroclitus
ENSCHIG00000006275	DDX52	99	61.979	ENSGMOG00000014879	ddx52	99	61.285	Gadus_morhua
ENSCHIG00000006275	DDX52	100	73.711	ENSGALG00000005489	DDX52	98	73.032	Gallus_gallus
ENSCHIG00000006275	DDX52	99	61.681	ENSGAFG00000000702	ddx52	93	61.681	Gambusia_affinis
ENSCHIG00000006275	DDX52	99	61.684	ENSGACG00000020624	ddx52	99	68.644	Gasterosteus_aculeatus
ENSCHIG00000006275	DDX52	99	73.300	ENSGAGG00000007234	DDX52	98	71.086	Gopherus_agassizii
ENSCHIG00000006275	DDX52	100	93.287	ENSGGOG00000028224	DDX52	100	92.988	Gorilla_gorilla
ENSCHIG00000006275	DDX52	100	60.265	ENSHBUG00000015638	ddx52	89	60.496	Haplochromis_burtoni
ENSCHIG00000006275	DDX52	95	72.875	ENSHGLG00000019205	-	96	72.875	Heterocephalus_glaber_female
ENSCHIG00000006275	DDX52	99	91.696	ENSHGLG00000006235	-	98	91.696	Heterocephalus_glaber_female
ENSCHIG00000006275	DDX52	76	95.227	ENSHGLG00100013765	-	82	95.227	Heterocephalus_glaber_male
ENSCHIG00000006275	DDX52	95	72.875	ENSHGLG00100018699	-	97	72.875	Heterocephalus_glaber_male
ENSCHIG00000006275	DDX52	99	60.690	ENSHCOG00000007966	ddx52	98	58.236	Hippocampus_comes
ENSCHIG00000006275	DDX52	99	62.290	ENSIPUG00000008623	ddx52	98	62.687	Ictalurus_punctatus
ENSCHIG00000006275	DDX52	57	94.161	ENSSTOG00000002550	DDX52	99	94.161	Ictidomys_tridecemlineatus
ENSCHIG00000006275	DDX52	100	90.223	ENSJJAG00000021877	Ddx52	100	89.684	Jaculus_jaculus
ENSCHIG00000006275	DDX52	99	62.500	ENSKMAG00000022270	ddx52	96	75.448	Kryptolebias_marmoratus
ENSCHIG00000006275	DDX52	99	60.403	ENSLBEG00000015403	ddx52	91	59.543	Labrus_bergylta
ENSCHIG00000006275	DDX52	99	71.870	ENSLACG00000012514	DDX52	96	70.805	Latimeria_chalumnae
ENSCHIG00000006275	DDX52	77	72.043	ENSLOCG00000005928	ddx52	96	69.792	Lepisosteus_oculatus
ENSCHIG00000006275	DDX52	100	83.162	ENSLAFG00000002635	DDX52	100	97.179	Loxodonta_africana
ENSCHIG00000006275	DDX52	100	93.976	ENSMFAG00000000640	DDX52	100	93.656	Macaca_fascicularis
ENSCHIG00000006275	DDX52	100	93.632	ENSMMUG00000002980	DDX52	100	93.322	Macaca_mulatta
ENSCHIG00000006275	DDX52	100	93.804	ENSMNEG00000043658	DDX52	100	93.489	Macaca_nemestrina
ENSCHIG00000006275	DDX52	100	93.115	ENSMLEG00000017518	DDX52	100	92.821	Mandrillus_leucophaeus
ENSCHIG00000006275	DDX52	99	64.177	ENSMAMG00000019719	ddx52	87	62.988	Mastacembelus_armatus
ENSCHIG00000006275	DDX52	100	60.265	ENSMZEG00005019044	ddx52	89	60.496	Maylandia_zebra
ENSCHIG00000006275	DDX52	93	75.786	ENSMGAG00000008091	DDX52	96	74.910	Meleagris_gallopavo
ENSCHIG00000006275	DDX52	100	84.068	ENSMAUG00000021084	Ddx52	99	82.862	Mesocricetus_auratus
ENSCHIG00000006275	DDX52	99	87.153	ENSMICG00000004290	-	99	87.153	Microcebus_murinus
ENSCHIG00000006275	DDX52	100	89.194	ENSMOCG00000009654	Ddx52	99	89.545	Microtus_ochrogaster
ENSCHIG00000006275	DDX52	99	61.130	ENSMMOG00000018825	ddx52	90	61.695	Mola_mola
ENSCHIG00000006275	DDX52	99	82.572	ENSMODG00000002493	DDX52	99	81.117	Monodelphis_domestica
ENSCHIG00000006275	DDX52	81	69.296	ENSMALG00000007621	ddx52	84	66.870	Monopterus_albus
ENSCHIG00000006275	DDX52	100	88.144	MGP_CAROLIEiJ_G0016888	Ddx52	100	87.333	Mus_caroli
ENSCHIG00000006275	DDX52	100	88.316	ENSMUSG00000020677	Ddx52	100	87.500	Mus_musculus
ENSCHIG00000006275	DDX52	100	89.003	MGP_PahariEiJ_G0018018	Ddx52	100	88.000	Mus_pahari
ENSCHIG00000006275	DDX52	100	88.316	MGP_SPRETEiJ_G0017733	Ddx52	100	87.500	Mus_spretus
ENSCHIG00000006275	DDX52	100	94.148	ENSMPUG00000015007	DDX52	100	93.656	Mustela_putorius_furo
ENSCHIG00000006275	DDX52	100	92.612	ENSMLUG00000007167	-	100	92.333	Myotis_lucifugus
ENSCHIG00000006275	DDX52	84	94.490	ENSMLUG00000024480	-	99	95.062	Myotis_lucifugus
ENSCHIG00000006275	DDX52	100	90.189	ENSNGAG00000020686	Ddx52	99	89.679	Nannospalax_galili
ENSCHIG00000006275	DDX52	84	68.238	ENSNBRG00000007750	ddx52	88	67.400	Neolamprologus_brichardi
ENSCHIG00000006275	DDX52	100	93.287	ENSNLEG00000002826	DDX52	100	92.821	Nomascus_leucogenys
ENSCHIG00000006275	DDX52	65	91.316	ENSMEUG00000011234	DDX52	98	90.102	Notamacropus_eugenii
ENSCHIG00000006275	DDX52	100	80.479	ENSOPRG00000003899	DDX52	100	80.699	Ochotona_princeps
ENSCHIG00000006275	DDX52	99	83.826	ENSODEG00000002857	-	99	82.125	Octodon_degus
ENSCHIG00000006275	DDX52	100	86.403	ENSODEG00000012814	-	100	86.403	Octodon_degus
ENSCHIG00000006275	DDX52	100	61.448	ENSONIG00000004869	ddx52	95	61.730	Oreochromis_niloticus
ENSCHIG00000006275	DDX52	95	78.383	ENSOANG00000007133	DDX52	98	77.002	Ornithorhynchus_anatinus
ENSCHIG00000006275	DDX52	100	92.083	ENSOCUG00000014532	DDX52	100	91.152	Oryctolagus_cuniculus
ENSCHIG00000006275	DDX52	99	62.862	ENSORLG00000005241	ddx52	91	61.538	Oryzias_latipes
ENSCHIG00000006275	DDX52	99	61.945	ENSORLG00015015546	ddx52	88	61.667	Oryzias_latipes_hsok
ENSCHIG00000006275	DDX52	99	62.287	ENSOMEG00000017602	ddx52	90	62.395	Oryzias_melastigma
ENSCHIG00000006275	DDX52	100	88.640	ENSOGAG00000000868	DDX52	99	88.679	Otolemur_garnettii
ENSCHIG00000006275	DDX52	100	99.666	ENSOARG00000002998	DDX52	100	99.666	Ovis_aries
ENSCHIG00000006275	DDX52	100	91.566	ENSPPAG00000028453	DDX52	100	91.152	Pan_paniscus
ENSCHIG00000006275	DDX52	100	92.771	ENSPPRG00000009742	DDX52	100	92.487	Panthera_pardus
ENSCHIG00000006275	DDX52	100	92.599	ENSPTIG00000013697	DDX52	100	92.321	Panthera_tigris_altaica
ENSCHIG00000006275	DDX52	100	92.771	ENSPTRG00000009058	DDX52	100	92.487	Pan_troglodytes
ENSCHIG00000006275	DDX52	100	93.632	ENSPANG00000022101	DDX52	100	93.322	Papio_anubis
ENSCHIG00000006275	DDX52	100	64.261	ENSPKIG00000013058	ddx52	99	63.333	Paramormyrops_kingsleyae
ENSCHIG00000006275	DDX52	99	75.643	ENSPSIG00000010226	DDX52	98	74.290	Pelodiscus_sinensis
ENSCHIG00000006275	DDX52	80	68.737	ENSPMGG00000005458	ddx52	99	72.414	Periophthalmus_magnuspinnatus
ENSCHIG00000006275	DDX52	100	89.708	ENSPEMG00000003263	Ddx52	99	89.376	Peromyscus_maniculatus_bairdii
ENSCHIG00000006275	DDX52	100	82.203	ENSPCIG00000017730	DDX52	91	81.758	Phascolarctos_cinereus
ENSCHIG00000006275	DDX52	99	62.775	ENSPFOG00000018378	ddx52	92	61.628	Poecilia_formosa
ENSCHIG00000006275	DDX52	99	62.944	ENSPLAG00000008368	ddx52	92	60.884	Poecilia_latipinna
ENSCHIG00000006275	DDX52	99	62.775	ENSPMEG00000002359	ddx52	92	61.628	Poecilia_mexicana
ENSCHIG00000006275	DDX52	99	62.887	ENSPREG00000016874	ddx52	92	60.000	Poecilia_reticulata
ENSCHIG00000006275	DDX52	100	92.955	ENSPPYG00000008221	DDX52	100	92.500	Pongo_abelii
ENSCHIG00000006275	DDX52	99	81.207	ENSPCAG00000005814	DDX52	99	80.402	Procavia_capensis
ENSCHIG00000006275	DDX52	100	93.632	ENSPVAG00000010462	DDX52	100	92.821	Pteropus_vampyrus
ENSCHIG00000006275	DDX52	100	61.340	ENSPNYG00000020730	ddx52	96	62.435	Pundamilia_nyererei
ENSCHIG00000006275	DDX52	99	63.621	ENSPNAG00000014707	ddx52	96	62.709	Pygocentrus_nattereri
ENSCHIG00000006275	DDX52	100	87.801	ENSRNOG00000002612	Ddx52	99	87.500	Rattus_norvegicus
ENSCHIG00000006275	DDX52	100	85.714	ENSRBIG00000032462	DDX52	100	85.643	Rhinopithecus_bieti
ENSCHIG00000006275	DDX52	100	86.747	ENSRROG00000034760	DDX52	100	86.644	Rhinopithecus_roxellana
ENSCHIG00000006275	DDX52	99	39.664	YGL171W	-	79	45.455	Saccharomyces_cerevisiae
ENSCHIG00000006275	DDX52	100	92.771	ENSSBOG00000035787	DDX52	100	92.154	Saimiri_boliviensis_boliviensis
ENSCHIG00000006275	DDX52	99	83.219	ENSSHAG00000013962	DDX52	98	81.788	Sarcophilus_harrisii
ENSCHIG00000006275	DDX52	100	65.352	ENSSFOG00015005055	ddx52	99	64.372	Scleropages_formosus
ENSCHIG00000006275	DDX52	99	60.631	ENSSMAG00000009788	ddx52	92	60.932	Scophthalmus_maximus
ENSCHIG00000006275	DDX52	99	61.809	ENSSDUG00000004022	ddx52	90	62.542	Seriola_dumerili
ENSCHIG00000006275	DDX52	99	61.977	ENSSLDG00000016999	ddx52	90	62.584	Seriola_lalandi_dorsalis
ENSCHIG00000006275	DDX52	77	99.286	ENSSARG00000000371	-	74	99.265	Sorex_araneus
ENSCHIG00000006275	DDX52	99	73.632	ENSSPUG00000000720	DDX52	97	72.375	Sphenodon_punctatus
ENSCHIG00000006275	DDX52	99	61.065	ENSSPAG00000014211	ddx52	87	61.338	Stegastes_partitus
ENSCHIG00000006275	DDX52	100	94.492	ENSSSCG00000021275	DDX52	100	94.324	Sus_scrofa
ENSCHIG00000006275	DDX52	99	73.801	ENSTGUG00000008303	-	100	73.801	Taeniopygia_guttata
ENSCHIG00000006275	DDX52	99	62.057	ENSTRUG00000017071	ddx52	87	61.653	Takifugu_rubripes
ENSCHIG00000006275	DDX52	99	62.609	ENSTNIG00000009990	ddx52	99	61.993	Tetraodon_nigroviridis
ENSCHIG00000006275	DDX52	84	84.722	ENSTBEG00000005982	DDX52	65	95.775	Tupaia_belangeri
ENSCHIG00000006275	DDX52	100	96.041	ENSTTRG00000008917	DDX52	100	95.659	Tursiops_truncatus
ENSCHIG00000006275	DDX52	100	94.324	ENSVPAG00000001979	DDX52	100	94.324	Vicugna_pacos
ENSCHIG00000006275	DDX52	100	94.836	ENSVVUG00000020209	DDX52	99	96.667	Vulpes_vulpes
ENSCHIG00000006275	DDX52	100	72.156	ENSXETG00000025903	ddx52	100	72.156	Xenopus_tropicalis
ENSCHIG00000006275	DDX52	99	62.395	ENSXMAG00000010805	ddx52	93	60.591	Xiphophorus_maculatus