EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000006338 (Gene tree)
Gene ID: 102177095
Gene Symbol: CASC3
Alias: BTZ|MLN51
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 19333 bases
Position: chr19:40079671-40099003
Accession: 102177095
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000002799	Btz	PF09405.10	1.4e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000008774	CASC3-201	2103	XM_018065023	ENSCHIP00000002799	700 (aa)	XP_017920512	UPI000D19418C

Gene Model

Click here to download ENSCHIG00000006338's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03013	RNA transport	KEGG
chx03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000006338's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000006338	CASC3	100	91.892	ENSG00000108349	CASC3	100	91.892	Homo_sapiens
ENSCHIG00000006338	CASC3	100	94.310	ENSAMEG00000007764	CASC3	100	94.310	Ailuropoda_melanoleuca
ENSCHIG00000006338	CASC3	75	53.698	ENSAOCG00000016676	casc3	77	53.595	Amphiprion_ocellaris
ENSCHIG00000006338	CASC3	75	53.698	ENSAPEG00000006787	casc3	70	53.595	Amphiprion_percula
ENSCHIG00000006338	CASC3	82	53.438	ENSATEG00000017196	casc3	76	54.194	Anabas_testudineus
ENSCHIG00000006338	CASC3	91	71.649	ENSACAG00000002674	CASC3	99	66.804	Anolis_carolinensis
ENSCHIG00000006338	CASC3	65	97.642	ENSANAG00000031954	-	100	97.642	Aotus_nancymaae
ENSCHIG00000006338	CASC3	99	81.187	ENSANAG00000034820	-	99	86.136	Aotus_nancymaae
ENSCHIG00000006338	CASC3	90	46.751	ENSAMXG00000032452	casc3	99	43.774	Astyanax_mexicanus
ENSCHIG00000006338	CASC3	100	99.000	ENSBTAG00000006250	CASC3	100	99.000	Bos_taurus
ENSCHIG00000006338	CASC3	100	91.143	ENSCJAG00000016032	CASC3	100	91.143	Callithrix_jacchus
ENSCHIG00000006338	CASC3	100	94.737	ENSCAFG00000016141	CASC3	100	94.737	Canis_familiaris
ENSCHIG00000006338	CASC3	100	95.028	ENSCAFG00020018882	CASC3	100	95.710	Canis_lupus_dingo
ENSCHIG00000006338	CASC3	88	94.346	ENSTSYG00000002975	CASC3	88	94.346	Carlito_syrichta
ENSCHIG00000006338	CASC3	88	88.636	ENSCAPG00000010514	CASC3	100	88.636	Cavia_aperea
ENSCHIG00000006338	CASC3	100	87.198	ENSCPOG00000015139	CASC3	100	87.055	Cavia_porcellus
ENSCHIG00000006338	CASC3	100	91.441	ENSCCAG00000033620	CASC3	100	91.583	Cebus_capucinus
ENSCHIG00000006338	CASC3	100	92.918	ENSCATG00000033593	CASC3	100	92.918	Cercocebus_atys
ENSCHIG00000006338	CASC3	100	88.762	ENSCLAG00000013730	CASC3	100	88.620	Chinchilla_lanigera
ENSCHIG00000006338	CASC3	100	92.756	ENSCSAG00000002777	CASC3	100	92.756	Chlorocebus_sabaeus
ENSCHIG00000006338	CASC3	99	73.352	ENSCPBG00000004750	CASC3	95	77.939	Chrysemys_picta_bellii
ENSCHIG00000006338	CASC3	100	93.438	ENSCANG00000008814	CASC3	100	93.438	Colobus_angolensis_palliatus
ENSCHIG00000006338	CASC3	100	91.857	ENSCGRG00001014706	Casc3	100	91.714	Cricetulus_griseus_chok1gshd
ENSCHIG00000006338	CASC3	100	84.429	ENSCGRG00000001952	Casc3	100	84.429	Cricetulus_griseus_crigri
ENSCHIG00000006338	CASC3	83	51.250	ENSCSEG00000010047	casc3	76	50.968	Cynoglossus_semilaevis
ENSCHIG00000006338	CASC3	100	92.603	ENSDNOG00000017249	CASC3	96	92.603	Dasypus_novemcinctus
ENSCHIG00000006338	CASC3	100	84.211	ENSETEG00000013720	CASC3	100	85.064	Echinops_telfairi
ENSCHIG00000006338	CASC3	99	37.600	ENSEBUG00000010654	casc3	98	37.683	Eptatretus_burgeri
ENSCHIG00000006338	CASC3	100	94.744	ENSEASG00005002909	CASC3	100	95.562	Equus_asinus_asinus
ENSCHIG00000006338	CASC3	100	94.737	ENSECAG00000019947	CASC3	88	94.737	Equus_caballus
ENSCHIG00000006338	CASC3	73	89.237	ENSEEUG00000014253	CASC3	100	89.237	Erinaceus_europaeus
ENSCHIG00000006338	CASC3	100	94.310	ENSFCAG00000014998	CASC3	100	94.310	Felis_catus
ENSCHIG00000006338	CASC3	87	73.259	ENSFALG00000000412	CASC3	97	73.576	Ficedula_albicollis
ENSCHIG00000006338	CASC3	93	88.073	ENSFDAG00000020696	CASC3	100	88.073	Fukomys_damarensis
ENSCHIG00000006338	CASC3	75	54.747	ENSFHEG00000015793	casc3	77	53.871	Fundulus_heteroclitus
ENSCHIG00000006338	CASC3	90	75.314	ENSGALG00000031813	CASC3	99	70.170	Gallus_gallus
ENSCHIG00000006338	CASC3	72	52.365	ENSGAFG00000017148	casc3	67	50.325	Gambusia_affinis
ENSCHIG00000006338	CASC3	88	77.868	ENSGAGG00000008432	CASC3	94	77.868	Gopherus_agassizii
ENSCHIG00000006338	CASC3	100	92.429	ENSGGOG00000005067	CASC3	100	92.429	Gorilla_gorilla
ENSCHIG00000006338	CASC3	100	88.620	ENSHGLG00000012117	CASC3	100	88.620	Heterocephalus_glaber_female
ENSCHIG00000006338	CASC3	88	89.015	ENSHGLG00100002268	CASC3	99	89.015	Heterocephalus_glaber_male
ENSCHIG00000006338	CASC3	100	92.745	ENSSTOG00000006374	CASC3	100	92.745	Ictidomys_tridecemlineatus
ENSCHIG00000006338	CASC3	100	88.920	ENSJJAG00000023525	Casc3	100	89.062	Jaculus_jaculus
ENSCHIG00000006338	CASC3	57	63.415	ENSKMAG00000019507	casc3	81	49.129	Kryptolebias_marmoratus
ENSCHIG00000006338	CASC3	64	67.133	ENSLBEG00000005435	casc3	76	53.376	Labrus_bergylta
ENSCHIG00000006338	CASC3	88	60.506	ENSLACG00000013200	CASC3	99	57.517	Latimeria_chalumnae
ENSCHIG00000006338	CASC3	77	68.103	ENSLOCG00000013518	casc3	74	65.517	Lepisosteus_oculatus
ENSCHIG00000006338	CASC3	100	92.034	ENSLAFG00000000606	CASC3	100	92.034	Loxodonta_africana
ENSCHIG00000006338	CASC3	100	92.918	ENSMFAG00000041496	CASC3	100	92.918	Macaca_fascicularis
ENSCHIG00000006338	CASC3	100	92.776	ENSMMUG00000045187	CASC3	100	93.059	Macaca_mulatta
ENSCHIG00000006338	CASC3	88	93.387	ENSMLEG00000029049	CASC3	98	93.387	Mandrillus_leucophaeus
ENSCHIG00000006338	CASC3	82	52.201	ENSMAMG00000005235	casc3	76	52.866	Mastacembelus_armatus
ENSCHIG00000006338	CASC3	86	75.164	ENSMGAG00000013247	CASC3	99	73.659	Meleagris_gallopavo
ENSCHIG00000006338	CASC3	71	90.600	ENSMAUG00000006023	Casc3	100	75.533	Mesocricetus_auratus
ENSCHIG00000006338	CASC3	100	90.625	ENSMICG00000003321	CASC3	100	91.335	Microcebus_murinus
ENSCHIG00000006338	CASC3	100	90.327	ENSMOCG00000013644	Casc3	100	89.189	Microtus_ochrogaster
ENSCHIG00000006338	CASC3	100	76.521	ENSMODG00000013044	CASC3	92	79.291	Monodelphis_domestica
ENSCHIG00000006338	CASC3	100	89.900	MGP_CAROLIEiJ_G0017099	Casc3	100	89.900	Mus_caroli
ENSCHIG00000006338	CASC3	100	89.189	ENSMUSG00000078676	Casc3	100	89.189	Mus_musculus
ENSCHIG00000006338	CASC3	100	89.189	MGP_SPRETEiJ_G0017943	Casc3	100	89.189	Mus_spretus
ENSCHIG00000006338	CASC3	100	94.026	ENSMPUG00000014903	CASC3	100	94.026	Mustela_putorius_furo
ENSCHIG00000006338	CASC3	100	90.922	ENSMLUG00000010520	CASC3	100	91.348	Myotis_lucifugus
ENSCHIG00000006338	CASC3	100	89.758	ENSNGAG00000023121	Casc3	100	90.185	Nannospalax_galili
ENSCHIG00000006338	CASC3	100	91.714	ENSNLEG00000001598	CASC3	100	91.714	Nomascus_leucogenys
ENSCHIG00000006338	CASC3	83	93.827	ENSMEUG00000015662	CASC3	97	70.801	Notamacropus_eugenii
ENSCHIG00000006338	CASC3	73	87.500	ENSOPRG00000007240	-	79	100.000	Ochotona_princeps
ENSCHIG00000006338	CASC3	100	88.193	ENSODEG00000017858	CASC3	100	88.478	Octodon_degus
ENSCHIG00000006338	CASC3	74	56.151	ENSONIG00000009337	casc3	99	48.603	Oreochromis_niloticus
ENSCHIG00000006338	CASC3	79	53.004	ENSOANG00000003499	-	81	67.893	Ornithorhynchus_anatinus
ENSCHIG00000006338	CASC3	100	92.603	ENSOCUG00000002954	CASC3	100	92.603	Oryctolagus_cuniculus
ENSCHIG00000006338	CASC3	100	91.926	ENSOGAG00000034486	CASC3	98	92.418	Otolemur_garnettii
ENSCHIG00000006338	CASC3	100	98.578	ENSOARG00000013239	CASC3	100	98.578	Ovis_aries
ENSCHIG00000006338	CASC3	100	92.714	ENSPPAG00000035069	CASC3	100	92.714	Pan_paniscus
ENSCHIG00000006338	CASC3	100	94.310	ENSPPRG00000023670	CASC3	100	94.310	Panthera_pardus
ENSCHIG00000006338	CASC3	88	94.346	ENSPTIG00000010891	CASC3	91	93.564	Panthera_tigris_altaica
ENSCHIG00000006338	CASC3	100	93.295	ENSPANG00000021708	CASC3	100	93.295	Papio_anubis
ENSCHIG00000006338	CASC3	100	91.000	ENSPEMG00000009774	Casc3	100	91.143	Peromyscus_maniculatus_bairdii
ENSCHIG00000006338	CASC3	100	80.851	ENSPCIG00000025678	CASC3	100	82.553	Phascolarctos_cinereus
ENSCHIG00000006338	CASC3	90	48.841	ENSPFOG00000017632	casc3	100	45.839	Poecilia_formosa
ENSCHIG00000006338	CASC3	75	54.633	ENSPLAG00000005268	casc3	77	54.693	Poecilia_latipinna
ENSCHIG00000006338	CASC3	68	46.154	ENSPMEG00000010299	casc3	73	47.174	Poecilia_mexicana
ENSCHIG00000006338	CASC3	64	67.143	ENSPREG00000011856	casc3	82	50.449	Poecilia_reticulata
ENSCHIG00000006338	CASC3	100	91.323	ENSPPYG00000008467	CASC3	100	92.176	Pongo_abelii
ENSCHIG00000006338	CASC3	100	89.773	ENSPCOG00000008183	CASC3	100	90.483	Propithecus_coquereli
ENSCHIG00000006338	CASC3	100	93.883	ENSPVAG00000008556	CASC3	100	93.883	Pteropus_vampyrus
ENSCHIG00000006338	CASC3	91	91.722	ENSRNOG00000009716	Casc3	100	92.053	Rattus_norvegicus
ENSCHIG00000006338	CASC3	100	93.295	ENSRBIG00000033289	CASC3	100	93.295	Rhinopithecus_bieti
ENSCHIG00000006338	CASC3	100	93.295	ENSRROG00000022337	CASC3	100	93.295	Rhinopithecus_roxellana
ENSCHIG00000006338	CASC3	88	90.615	ENSSBOG00000031406	CASC3	98	92.071	Saimiri_boliviensis_boliviensis
ENSCHIG00000006338	CASC3	90	83.968	ENSSHAG00000013338	CASC3	100	84.286	Sarcophilus_harrisii
ENSCHIG00000006338	CASC3	71	62.179	ENSSFOG00015002645	casc3	92	49.440	Scleropages_formosus
ENSCHIG00000006338	CASC3	75	66.667	ENSSMAG00000016096	casc3	75	53.674	Scophthalmus_maximus
ENSCHIG00000006338	CASC3	61	76.724	ENSSLDG00000020308	casc3	79	55.665	Seriola_lalandi_dorsalis
ENSCHIG00000006338	CASC3	85	82.155	ENSSARG00000010378	CASC3	99	82.363	Sorex_araneus
ENSCHIG00000006338	CASC3	88	94.830	ENSSSCG00000017477	CASC3	98	94.830	Sus_scrofa
ENSCHIG00000006338	CASC3	75	74.905	ENSTGUG00000002300	CASC3	99	74.905	Taeniopygia_guttata
ENSCHIG00000006338	CASC3	89	45.134	ENSTRUG00000000673	casc3	99	43.567	Takifugu_rubripes
ENSCHIG00000006338	CASC3	66	98.585	ENSTBEG00000017459	CASC3	67	98.585	Tupaia_belangeri
ENSCHIG00000006338	CASC3	86	86.589	ENSTTRG00000016896	CASC3	100	86.589	Tursiops_truncatus
ENSCHIG00000006338	CASC3	100	94.318	ENSUAMG00000015116	CASC3	100	94.318	Ursus_americanus
ENSCHIG00000006338	CASC3	88	94.023	ENSUMAG00000017697	CASC3	98	94.023	Ursus_maritimus
ENSCHIG00000006338	CASC3	75	100.000	ENSVPAG00000000799	CASC3	75	100.000	Vicugna_pacos
ENSCHIG00000006338	CASC3	100	94.879	ENSVVUG00000000997	CASC3	100	94.879	Vulpes_vulpes
ENSCHIG00000006338	CASC3	89	60.692	ENSXETG00000024395	casc3	98	58.577	Xenopus_tropicalis
ENSCHIG00000006338	CASC3	71	60.317	ENSXMAG00000013937	casc3	77	53.398	Xiphophorus_maculatus