EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000006654 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 1217 bases
Position: chr25:12833683-12834899
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000002869	RRM_1	PF00076.22	1.3e-19	1	2
ENSCHIP00000002869	RRM_1	PF00076.22	1.3e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000008887	-	1104	-	ENSCHIP00000002869	367 (aa)	-	UPI000D191714

Gene Model

Click here to download ENSCHIG00000006654's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000006654's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000006654	-	50	74.627	ENSACLG00000014260	sf3b4	73	59.539	Astatotilapia_calliptera
ENSCHIG00000006654	-	60	57.806	WBGene00004723	sap-49	52	62.687	Caenorhabditis_elegans
ENSCHIG00000006654	-	50	74.129	ENSCCAG00000021751	-	69	67.500	Cebus_capucinus
ENSCHIG00000006654	-	73	69.103	ENSCCAG00000019823	-	87	60.904	Cebus_capucinus
ENSCHIG00000006654	-	50	74.627	ENSCPBG00000008041	SF3B4	97	55.854	Chrysemys_picta_bellii
ENSCHIG00000006654	-	50	66.667	ENSCING00000002337	-	85	51.084	Ciona_intestinalis
ENSCHIG00000006654	-	50	74.627	ENSCSEG00000015258	sf3b4	64	61.438	Cynoglossus_semilaevis
ENSCHIG00000006654	-	50	74.627	ENSCVAG00000005536	sf3b4	63	64.113	Cyprinodon_variegatus
ENSCHIG00000006654	-	50	74.627	ENSDARG00000018574	sf3b4	74	59.935	Danio_rerio
ENSCHIG00000006654	-	73	64.725	ENSDNOG00000037231	-	76	65.372	Dasypus_novemcinctus
ENSCHIG00000006654	-	50	66.000	FBgn0015818	Spx	58	66.000	Drosophila_melanogaster
ENSCHIG00000006654	-	50	74.627	ENSELUG00000012876	sf3b4	76	58.786	Esox_lucius
ENSCHIG00000006654	-	50	74.627	ENSGALG00000013352	SF3B4	99	56.115	Gallus_gallus
ENSCHIG00000006654	-	61	62.406	ENSGAFG00000010181	sf3b4	74	61.462	Gambusia_affinis
ENSCHIG00000006654	-	50	74.627	ENSGAGG00000025055	SF3B4	85	55.854	Gopherus_agassizii
ENSCHIG00000006654	-	95	60.000	ENSGGOG00000038845	-	93	56.061	Gorilla_gorilla
ENSCHIG00000006654	-	50	74.627	ENSHBUG00000002028	sf3b4	73	59.539	Haplochromis_burtoni
ENSCHIG00000006654	-	50	74.627	ENSIPUG00000012242	Sf3b4	77	59.248	Ictalurus_punctatus
ENSCHIG00000006654	-	69	61.246	ENSSTOG00000029627	-	71	63.211	Ictidomys_tridecemlineatus
ENSCHIG00000006654	-	50	74.627	ENSKMAG00000008154	sf3b4	64	65.873	Kryptolebias_marmoratus
ENSCHIG00000006654	-	50	73.632	ENSLACG00000004436	SF3B4	83	62.500	Latimeria_chalumnae
ENSCHIG00000006654	-	50	74.627	ENSLOCG00000009048	sf3b4	72	62.092	Lepisosteus_oculatus
ENSCHIG00000006654	-	74	53.822	ENSMFAG00000039067	-	76	53.571	Macaca_fascicularis
ENSCHIG00000006654	-	74	53.822	ENSMNEG00000031526	-	76	53.571	Macaca_nemestrina
ENSCHIG00000006654	-	50	74.627	ENSMZEG00005026741	sf3b4	73	59.539	Maylandia_zebra
ENSCHIG00000006654	-	50	74.627	ENSMGAG00000000653	SF3B4	96	57.248	Meleagris_gallopavo
ENSCHIG00000006654	-	50	74.627	ENSMMOG00000018032	sf3b4	64	65.737	Mola_mola
ENSCHIG00000006654	-	50	74.627	ENSMALG00000006174	sf3b4	73	59.539	Monopterus_albus
ENSCHIG00000006654	-	50	74.627	ENSNBRG00000013865	sf3b4	73	59.868	Neolamprologus_brichardi
ENSCHIG00000006654	-	77	59.692	ENSNLEG00000000537	-	93	54.187	Nomascus_leucogenys
ENSCHIG00000006654	-	70	61.837	ENSODEG00000008916	-	78	62.143	Octodon_degus
ENSCHIG00000006654	-	50	74.627	ENSONIG00000002730	sf3b4	73	59.539	Oreochromis_niloticus
ENSCHIG00000006654	-	50	74.627	ENSORLG00000003062	sf3b4	79	59.804	Oryzias_latipes
ENSCHIG00000006654	-	50	74.627	ENSORLG00020000687	sf3b4	77	59.804	Oryzias_latipes_hni
ENSCHIG00000006654	-	50	74.627	ENSORLG00015010989	sf3b4	77	59.804	Oryzias_latipes_hsok
ENSCHIG00000006654	-	50	74.627	ENSOMEG00000013694	sf3b4	73	59.223	Oryzias_melastigma
ENSCHIG00000006654	-	83	86.510	ENSOARG00000007368	-	95	81.606	Ovis_aries
ENSCHIG00000006654	-	95	56.566	ENSPPAG00000030024	-	94	59.406	Pan_paniscus
ENSCHIG00000006654	-	95	54.545	ENSPTRG00000049727	-	94	57.178	Pan_troglodytes
ENSCHIG00000006654	-	50	74.627	ENSPKIG00000020669	sf3b4	82	58.696	Paramormyrops_kingsleyae
ENSCHIG00000006654	-	67	59.438	ENSPSIG00000009565	SF3B4	86	59.191	Pelodiscus_sinensis
ENSCHIG00000006654	-	50	74.627	ENSPFOG00000005754	sf3b4	74	61.462	Poecilia_formosa
ENSCHIG00000006654	-	50	74.627	ENSPLAG00000001401	sf3b4	80	61.462	Poecilia_latipinna
ENSCHIG00000006654	-	50	74.627	ENSPREG00000011076	sf3b4	76	59.295	Poecilia_reticulata
ENSCHIG00000006654	-	50	71.642	ENSPCAG00000000392	SF3B4	56	88.571	Procavia_capensis
ENSCHIG00000006654	-	50	74.627	ENSPNYG00000012700	sf3b4	73	59.539	Pundamilia_nyererei
ENSCHIG00000006654	-	50	74.627	ENSPNAG00000000686	sf3b4	63	65.726	Pygocentrus_nattereri
ENSCHIG00000006654	-	75	55.836	ENSRROG00000028213	-	85	52.308	Rhinopithecus_roxellana
ENSCHIG00000006654	-	50	74.627	ENSSPAG00000019219	sf3b4	73	61.279	Stegastes_partitus
ENSCHIG00000006654	-	98	43.291	ENSSSCG00000039440	-	79	48.734	Sus_scrofa
ENSCHIG00000006654	-	50	74.627	ENSTGUG00000004470	SF3B4	79	74.627	Taeniopygia_guttata
ENSCHIG00000006654	-	50	72.000	ENSXETG00000011038	sf3b4	82	53.846	Xenopus_tropicalis
ENSCHIG00000006654	-	50	74.627	ENSXCOG00000019895	sf3b4	74	62.126	Xiphophorus_couchianus
ENSCHIG00000006654	-	50	74.627	ENSXMAG00000003772	sf3b4	74	61.794	Xiphophorus_maculatus