EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000006718 (Gene tree)
Gene ID: 102188212
Gene Symbol: RAVER1
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 12401 bases
Position: chr7:94730938-94743338
Accession: 102188212
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000003005	RRM_1	PF00076.22	6.9e-29	1	2
ENSCHIP00000003005	RRM_1	PF00076.22	6.9e-29	2	2
ENSCHIP00000002996	RRM_1	PF00076.22	1.5e-28	1	2
ENSCHIP00000002996	RRM_1	PF00076.22	1.5e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000009053	RAVER1-202	1821	-	ENSCHIP00000003005	606 (aa)	-	UPI000D191D2B
ENSCHIT00000009040	RAVER1-201	2199	XM_018051028	ENSCHIP00000002996	732 (aa)	XP_017906517	UPI000D193442

Gene Model

Click here to download ENSCHIG00000006718's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000006718's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000006718	RAVER1	58	56.695	ENSCHIG00000005514	RAVER2	80	44.928

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000006718	RAVER1	100	90.759	ENSG00000161847	RAVER1	100	90.759	Homo_sapiens
ENSCHIG00000006718	RAVER1	77	61.429	ENSAPOG00000017267	raver1	73	56.920	Acanthochromis_polyacanthus
ENSCHIG00000006718	RAVER1	100	89.879	ENSAMEG00000011738	RAVER1	98	89.879	Ailuropoda_melanoleuca
ENSCHIG00000006718	RAVER1	77	61.429	ENSAOCG00000005128	raver1	78	57.510	Amphiprion_ocellaris
ENSCHIG00000006718	RAVER1	76	75.439	ENSAPEG00000010854	raver1	82	75.439	Amphiprion_percula
ENSCHIG00000006718	RAVER1	100	50.535	ENSATEG00000021004	raver1	57	64.066	Anabas_testudineus
ENSCHIG00000006718	RAVER1	87	80.645	ENSACAG00000008386	-	95	58.187	Anolis_carolinensis
ENSCHIG00000006718	RAVER1	100	88.949	ENSANAG00000028226	RAVER1	98	88.679	Aotus_nancymaae
ENSCHIG00000006718	RAVER1	73	61.905	ENSACLG00000018492	raver1	91	50.629	Astatotilapia_calliptera
ENSCHIG00000006718	RAVER1	79	85.714	ENSAMXG00000005132	raver1	86	85.714	Astyanax_mexicanus
ENSCHIG00000006718	RAVER1	100	92.308	ENSBTAG00000015721	RAVER1	97	97.500	Bos_taurus
ENSCHIG00000006718	RAVER1	100	89.353	ENSCJAG00000005671	RAVER1	98	89.084	Callithrix_jacchus
ENSCHIG00000006718	RAVER1	100	88.259	ENSCAFG00000017861	RAVER1	98	88.259	Canis_familiaris
ENSCHIG00000006718	RAVER1	100	88.259	ENSCAFG00020024449	RAVER1	100	88.259	Canis_lupus_dingo
ENSCHIG00000006718	RAVER1	89	89.908	ENSTSYG00000027107	RAVER1	100	90.221	Carlito_syrichta
ENSCHIG00000006718	RAVER1	99	79.242	ENSCAPG00000002269	RAVER1	100	85.778	Cavia_aperea
ENSCHIG00000006718	RAVER1	100	87.314	ENSCPOG00000001008	RAVER1	100	87.314	Cavia_porcellus
ENSCHIG00000006718	RAVER1	100	89.189	ENSCCAG00000031723	RAVER1	98	88.919	Cebus_capucinus
ENSCHIG00000006718	RAVER1	100	89.623	ENSCATG00000043863	RAVER1	98	89.353	Cercocebus_atys
ENSCHIG00000006718	RAVER1	100	88.679	ENSCLAG00000009336	RAVER1	100	88.544	Chinchilla_lanigera
ENSCHIG00000006718	RAVER1	100	89.623	ENSCSAG00000007317	RAVER1	84	89.353	Chlorocebus_sabaeus
ENSCHIG00000006718	RAVER1	95	73.510	ENSCPBG00000005349	-	96	59.974	Chrysemys_picta_bellii
ENSCHIG00000006718	RAVER1	100	89.757	ENSCANG00000008337	RAVER1	98	89.488	Colobus_angolensis_palliatus
ENSCHIG00000006718	RAVER1	100	87.736	ENSCGRG00001013260	-	100	87.466	Cricetulus_griseus_chok1gshd
ENSCHIG00000006718	RAVER1	100	87.736	ENSCGRG00000015138	-	100	87.466	Cricetulus_griseus_crigri
ENSCHIG00000006718	RAVER1	97	48.919	ENSCSEG00000021092	raver1	79	73.214	Cynoglossus_semilaevis
ENSCHIG00000006718	RAVER1	97	50.476	ENSCVAG00000013971	raver1	68	65.111	Cyprinodon_variegatus
ENSCHIG00000006718	RAVER1	74	60.659	ENSDARG00000052617	raver1	70	70.089	Danio_rerio
ENSCHIG00000006718	RAVER1	66	84.503	ENSDNOG00000035742	-	73	78.697	Dasypus_novemcinctus
ENSCHIG00000006718	RAVER1	100	81.003	ENSDORG00000010106	-	97	87.083	Dipodomys_ordii
ENSCHIG00000006718	RAVER1	91	71.506	ENSETEG00000008201	-	87	89.340	Echinops_telfairi
ENSCHIG00000006718	RAVER1	100	82.043	ENSEASG00005010544	-	100	82.537	Equus_asinus_asinus
ENSCHIG00000006718	RAVER1	100	92.308	ENSECAG00000024966	RAVER1	98	92.308	Equus_caballus
ENSCHIG00000006718	RAVER1	97	51.667	ENSELUG00000023287	raver1	67	59.921	Esox_lucius
ENSCHIG00000006718	RAVER1	100	91.903	ENSFCAG00000009435	RAVER1	98	92.038	Felis_catus
ENSCHIG00000006718	RAVER1	100	87.466	ENSFDAG00000015113	RAVER1	100	86.792	Fukomys_damarensis
ENSCHIG00000006718	RAVER1	96	51.318	ENSGMOG00000003649	raver1	79	65.789	Gadus_morhua
ENSCHIG00000006718	RAVER1	100	49.472	ENSGAFG00000015944	raver1	69	65.012	Gambusia_affinis
ENSCHIG00000006718	RAVER1	60	67.575	ENSGACG00000013818	raver1	99	50.066	Gasterosteus_aculeatus
ENSCHIG00000006718	RAVER1	80	78.551	ENSGAGG00000011748	-	96	77.151	Gopherus_agassizii
ENSCHIG00000006718	RAVER1	100	89.623	ENSGGOG00000006015	RAVER1	98	88.949	Gorilla_gorilla
ENSCHIG00000006718	RAVER1	73	61.905	ENSHBUG00000021210	raver1	91	50.909	Haplochromis_burtoni
ENSCHIG00000006718	RAVER1	100	87.466	ENSHGLG00000015460	RAVER1	100	86.253	Heterocephalus_glaber_female
ENSCHIG00000006718	RAVER1	100	87.466	ENSHGLG00100000812	RAVER1	100	86.253	Heterocephalus_glaber_male
ENSCHIG00000006718	RAVER1	79	65.333	ENSHCOG00000000449	raver1	67	65.770	Hippocampus_comes
ENSCHIG00000006718	RAVER1	97	53.508	ENSIPUG00000013153	raver1	76	85.714	Ictalurus_punctatus
ENSCHIG00000006718	RAVER1	100	89.906	ENSSTOG00000003241	RAVER1	100	89.502	Ictidomys_tridecemlineatus
ENSCHIG00000006718	RAVER1	100	88.441	ENSJJAG00000018219	-	100	87.769	Jaculus_jaculus
ENSCHIG00000006718	RAVER1	98	51.090	ENSKMAG00000017355	raver1	93	49.204	Kryptolebias_marmoratus
ENSCHIG00000006718	RAVER1	67	66.098	ENSLBEG00000008268	raver1	70	57.476	Labrus_bergylta
ENSCHIG00000006718	RAVER1	90	60.315	ENSLACG00000005809	-	99	59.626	Latimeria_chalumnae
ENSCHIG00000006718	RAVER1	96	54.228	ENSLOCG00000007500	raver1	94	51.213	Lepisosteus_oculatus
ENSCHIG00000006718	RAVER1	100	89.757	ENSLAFG00000003664	-	100	89.218	Loxodonta_africana
ENSCHIG00000006718	RAVER1	100	89.084	ENSMFAG00000037977	RAVER1	98	88.814	Macaca_fascicularis
ENSCHIG00000006718	RAVER1	100	89.353	ENSMMUG00000014897	RAVER1	98	89.084	Macaca_mulatta
ENSCHIG00000006718	RAVER1	100	89.353	ENSMNEG00000028390	RAVER1	98	89.084	Macaca_nemestrina
ENSCHIG00000006718	RAVER1	100	89.623	ENSMLEG00000041959	RAVER1	98	89.353	Mandrillus_leucophaeus
ENSCHIG00000006718	RAVER1	75	81.633	ENSMAMG00000012059	raver1	60	81.633	Mastacembelus_armatus
ENSCHIG00000006718	RAVER1	73	61.905	ENSMZEG00005019002	raver1	91	51.189	Maylandia_zebra
ENSCHIG00000006718	RAVER1	100	87.231	ENSMAUG00000017948	-	100	86.962	Mesocricetus_auratus
ENSCHIG00000006718	RAVER1	99	88.243	ENSMICG00000010326	RAVER1	99	87.973	Microcebus_murinus
ENSCHIG00000006718	RAVER1	100	88.005	ENSMOCG00000015553	-	100	87.736	Microtus_ochrogaster
ENSCHIG00000006718	RAVER1	98	50.815	ENSMMOG00000012093	raver1	65	85.417	Mola_mola
ENSCHIG00000006718	RAVER1	89	83.648	ENSMODG00000005584	-	89	72.276	Monodelphis_domestica
ENSCHIG00000006718	RAVER1	98	49.260	ENSMALG00000016569	raver1	68	65.207	Monopterus_albus
ENSCHIG00000006718	RAVER1	100	86.364	MGP_CAROLIEiJ_G0031860	-	100	86.096	Mus_caroli
ENSCHIG00000006718	RAVER1	100	86.497	ENSMUSG00000010205	Raver1	100	86.364	Mus_musculus
ENSCHIG00000006718	RAVER1	100	85.239	MGP_PahariEiJ_G0014726	-	100	85.904	Mus_pahari
ENSCHIG00000006718	RAVER1	100	86.364	MGP_SPRETEiJ_G0032984	-	100	86.230	Mus_spretus
ENSCHIG00000006718	RAVER1	100	91.498	ENSMPUG00000006712	RAVER1	98	91.498	Mustela_putorius_furo
ENSCHIG00000006718	RAVER1	100	87.449	ENSMLUG00000012328	RAVER1	100	87.449	Myotis_lucifugus
ENSCHIG00000006718	RAVER1	100	86.253	ENSNGAG00000001260	-	100	85.714	Nannospalax_galili
ENSCHIG00000006718	RAVER1	73	52.834	ENSNBRG00000010139	raver1	65	51.111	Neolamprologus_brichardi
ENSCHIG00000006718	RAVER1	100	89.218	ENSNLEG00000012181	RAVER1	98	88.949	Nomascus_leucogenys
ENSCHIG00000006718	RAVER1	90	73.065	ENSMEUG00000003281	-	100	70.685	Notamacropus_eugenii
ENSCHIG00000006718	RAVER1	100	88.633	ENSODEG00000016260	RAVER1	100	88.962	Octodon_degus
ENSCHIG00000006718	RAVER1	96	51.836	ENSONIG00000001559	raver1	99	50.619	Oreochromis_niloticus
ENSCHIG00000006718	RAVER1	100	81.781	ENSOCUG00000020918	RAVER1	98	80.972	Oryctolagus_cuniculus
ENSCHIG00000006718	RAVER1	67	67.079	ENSORLG00000005458	raver1	67	67.079	Oryzias_latipes
ENSCHIG00000006718	RAVER1	67	66.832	ENSORLG00020004392	raver1	67	66.832	Oryzias_latipes_hni
ENSCHIG00000006718	RAVER1	67	66.584	ENSORLG00015017222	raver1	67	66.584	Oryzias_latipes_hsok
ENSCHIG00000006718	RAVER1	62	83.673	ENSOMEG00000023956	raver1	67	83.673	Oryzias_melastigma
ENSCHIG00000006718	RAVER1	100	89.339	ENSOGAG00000011071	RAVER1	98	88.394	Otolemur_garnettii
ENSCHIG00000006718	RAVER1	100	91.093	ENSOARG00000015886	RAVER1	98	91.093	Ovis_aries
ENSCHIG00000006718	RAVER1	100	89.757	ENSPPAG00000002611	RAVER1	98	89.084	Pan_paniscus
ENSCHIG00000006718	RAVER1	100	92.038	ENSPPRG00000009912	RAVER1	100	90.291	Panthera_pardus
ENSCHIG00000006718	RAVER1	100	89.757	ENSPTRG00000010466	RAVER1	98	89.084	Pan_troglodytes
ENSCHIG00000006718	RAVER1	100	89.488	ENSPANG00000004122	RAVER1	98	89.218	Papio_anubis
ENSCHIG00000006718	RAVER1	100	87.752	ENSPEMG00000016411	-	100	87.887	Peromyscus_maniculatus_bairdii
ENSCHIG00000006718	RAVER1	99	84.632	ENSPCIG00000018695	-	99	80.639	Phascolarctos_cinereus
ENSCHIG00000006718	RAVER1	97	51.075	ENSPFOG00000007016	raver1	68	64.916	Poecilia_formosa
ENSCHIG00000006718	RAVER1	67	67.076	ENSPLAG00000020793	raver1	62	68.421	Poecilia_latipinna
ENSCHIG00000006718	RAVER1	97	51.907	ENSPMEG00000011220	raver1	68	67.241	Poecilia_mexicana
ENSCHIG00000006718	RAVER1	73	88.372	ENSPREG00000006864	raver1	65	88.372	Poecilia_reticulata
ENSCHIG00000006718	RAVER1	100	88.799	ENSPPYG00000010514	RAVER1	84	88.664	Pongo_abelii
ENSCHIG00000006718	RAVER1	100	90.713	ENSPCOG00000026605	RAVER1	98	90.444	Propithecus_coquereli
ENSCHIG00000006718	RAVER1	100	90.270	ENSPVAG00000003689	RAVER1	100	89.595	Pteropus_vampyrus
ENSCHIG00000006718	RAVER1	67	85.417	ENSPNYG00000013284	raver1	68	67.337	Pundamilia_nyererei
ENSCHIG00000006718	RAVER1	99	50.999	ENSPNAG00000015476	raver1	67	67.164	Pygocentrus_nattereri
ENSCHIG00000006718	RAVER1	100	85.829	ENSRNOG00000020710	Raver1	100	85.963	Rattus_norvegicus
ENSCHIG00000006718	RAVER1	100	90.027	ENSRBIG00000034702	RAVER1	98	89.488	Rhinopithecus_bieti
ENSCHIG00000006718	RAVER1	100	87.062	ENSRROG00000031186	RAVER1	98	86.658	Rhinopithecus_roxellana
ENSCHIG00000006718	RAVER1	100	86.523	ENSSBOG00000023423	RAVER1	98	86.119	Saimiri_boliviensis_boliviensis
ENSCHIG00000006718	RAVER1	90	73.599	ENSSHAG00000008181	-	90	71.829	Sarcophilus_harrisii
ENSCHIG00000006718	RAVER1	67	65.111	ENSSMAG00000004546	raver1	55	65.111	Scophthalmus_maximus
ENSCHIG00000006718	RAVER1	81	56.298	ENSSDUG00000021063	raver1	85	55.307	Seriola_dumerili
ENSCHIG00000006718	RAVER1	78	64.000	ENSSLDG00000014505	raver1	80	58.065	Seriola_lalandi_dorsalis
ENSCHIG00000006718	RAVER1	78	64.000	ENSSPAG00000000688	raver1	84	56.190	Stegastes_partitus
ENSCHIG00000006718	RAVER1	100	92.578	ENSSSCG00000013650	-	98	92.308	Sus_scrofa
ENSCHIG00000006718	RAVER1	96	51.393	ENSTRUG00000025641	raver1	78	59.574	Takifugu_rubripes
ENSCHIG00000006718	RAVER1	100	91.363	ENSTTRG00000009552	RAVER1	100	91.093	Tursiops_truncatus
ENSCHIG00000006718	RAVER1	100	92.038	ENSUAMG00000020385	RAVER1	98	92.038	Ursus_americanus
ENSCHIG00000006718	RAVER1	100	88.259	ENSVVUG00000028976	RAVER1	98	88.259	Vulpes_vulpes
ENSCHIG00000006718	RAVER1	89	65.306	ENSXETG00000011622	raver1	100	52.694	Xenopus_tropicalis
ENSCHIG00000006718	RAVER1	99	51.344	ENSXCOG00000016368	raver1	69	65.311	Xiphophorus_couchianus
ENSCHIG00000006718	RAVER1	99	50.267	ENSXMAG00000000217	raver1	69	65.394	Xiphophorus_maculatus