EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000006921 (Gene tree)
Gene ID: 102171526
Gene Symbol: XRN2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 67248 bases
Position: chr13:39971065-40038312
Accession: 102171526
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000003157	XRN_N	PF03159.18	1.3e-102	1	1
ENSCHIP00000003148	XRN_N	PF03159.18	1.4e-102	1	1
ENSCHIP00000003139	XRN_N	PF03159.18	1.4e-102	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000009484	XRN2-203	2826	-	ENSCHIP00000003157	941 (aa)	-	UPI000D195AB0
ENSCHIT00000009448	XRN2-202	4114	XM_018057268	ENSCHIP00000003148	951 (aa)	XP_017912757	UPI000846688B
ENSCHIT00000009420	XRN2-201	6467	-	ENSCHIP00000003139	961 (aa)	-	UPI000D18EAC1

Gene Model

Click here to download ENSCHIG00000006921's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03008	Ribosome biogenesis in eukaryotes	KEGG
chx03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000006921's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000006921	XRN2	100	96.320	ENSG00000088930	XRN2	100	96.320	Homo_sapiens
ENSCHIG00000006921	XRN2	97	70.988	ENSAPOG00000009818	xrn2	100	69.756	Acanthochromis_polyacanthus
ENSCHIG00000006921	XRN2	100	96.635	ENSAMEG00000012581	XRN2	100	96.635	Ailuropoda_melanoleuca
ENSCHIG00000006921	XRN2	90	70.656	ENSACIG00000015047	xrn2	95	73.896	Amphilophus_citrinellus
ENSCHIG00000006921	XRN2	97	71.795	ENSAOCG00000023632	xrn2	100	70.558	Amphiprion_ocellaris
ENSCHIG00000006921	XRN2	97	71.626	ENSAPEG00000014871	xrn2	100	70.367	Amphiprion_percula
ENSCHIG00000006921	XRN2	95	71.753	ENSATEG00000001273	xrn2	97	71.067	Anabas_testudineus
ENSCHIG00000006921	XRN2	97	82.347	ENSAPLG00000013869	XRN2	99	82.777	Anas_platyrhynchos
ENSCHIG00000006921	XRN2	100	80.331	ENSACAG00000005565	XRN2	100	80.331	Anolis_carolinensis
ENSCHIG00000006921	XRN2	100	95.899	ENSANAG00000020126	XRN2	100	95.899	Aotus_nancymaae
ENSCHIG00000006921	XRN2	90	72.864	ENSACLG00000010522	xrn2	96	75.833	Astatotilapia_calliptera
ENSCHIG00000006921	XRN2	100	70.600	ENSAMXG00000018301	xrn2	100	70.600	Astyanax_mexicanus
ENSCHIG00000006921	XRN2	100	98.843	ENSBTAG00000011304	XRN2	100	98.843	Bos_taurus
ENSCHIG00000006921	XRN2	86	55.465	WBGene00006964	xrn-2	88	55.287	Caenorhabditis_elegans
ENSCHIG00000006921	XRN2	100	96.004	ENSCJAG00000005611	XRN2	100	96.004	Callithrix_jacchus
ENSCHIG00000006921	XRN2	100	96.530	ENSCAFG00000005185	XRN2	100	96.530	Canis_familiaris
ENSCHIG00000006921	XRN2	100	96.530	ENSCAFG00020027479	XRN2	100	96.530	Canis_lupus_dingo
ENSCHIG00000006921	XRN2	100	95.584	ENSTSYG00000008315	XRN2	100	95.584	Carlito_syrichta
ENSCHIG00000006921	XRN2	97	80.819	ENSCAPG00000010773	XRN2	99	80.819	Cavia_aperea
ENSCHIG00000006921	XRN2	100	95.794	ENSCPOG00000009407	XRN2	100	95.794	Cavia_porcellus
ENSCHIG00000006921	XRN2	100	96.425	ENSCATG00000040350	XRN2	100	96.425	Cercocebus_atys
ENSCHIG00000006921	XRN2	100	96.320	ENSCLAG00000013419	XRN2	100	96.320	Chinchilla_lanigera
ENSCHIG00000006921	XRN2	100	96.425	ENSCSAG00000011094	XRN2	100	96.425	Chlorocebus_sabaeus
ENSCHIG00000006921	XRN2	68	97.849	ENSCHOG00000013404	XRN2	70	97.849	Choloepus_hoffmanni
ENSCHIG00000006921	XRN2	100	84.511	ENSCPBG00000023533	XRN2	100	85.031	Chrysemys_picta_bellii
ENSCHIG00000006921	XRN2	86	60.621	ENSCING00000022336	-	100	60.979	Ciona_intestinalis
ENSCHIG00000006921	XRN2	90	57.208	ENSCSAVG00000011217	-	100	61.597	Ciona_savignyi
ENSCHIG00000006921	XRN2	100	96.425	ENSCANG00000040240	XRN2	100	96.425	Colobus_angolensis_palliatus
ENSCHIG00000006921	XRN2	98	94.194	ENSCGRG00001010676	Xrn2	100	94.105	Cricetulus_griseus_chok1gshd
ENSCHIG00000006921	XRN2	97	93.427	ENSCGRG00000006378	Xrn2	99	93.427	Cricetulus_griseus_crigri
ENSCHIG00000006921	XRN2	54	71.569	ENSCSEG00000005628	xrn2	100	71.569	Cynoglossus_semilaevis
ENSCHIG00000006921	XRN2	89	71.494	ENSCVAG00000018999	xrn2	98	76.571	Cyprinodon_variegatus
ENSCHIG00000006921	XRN2	100	69.570	ENSDARG00000101900	xrn2	96	77.863	Danio_rerio
ENSCHIG00000006921	XRN2	100	95.163	ENSDNOG00000001895	XRN2	100	95.163	Dasypus_novemcinctus
ENSCHIG00000006921	XRN2	100	94.261	ENSDORG00000005434	Xrn2	100	94.261	Dipodomys_ordii
ENSCHIG00000006921	XRN2	86	57.557	FBgn0031868	Rat1	89	56.511	Drosophila_melanogaster
ENSCHIG00000006921	XRN2	100	82.545	ENSETEG00000001740	XRN2	100	82.545	Echinops_telfairi
ENSCHIG00000006921	XRN2	84	71.879	ENSEBUG00000016136	xrn2	100	71.879	Eptatretus_burgeri
ENSCHIG00000006921	XRN2	100	95.899	ENSEASG00005002484	XRN2	100	95.899	Equus_asinus_asinus
ENSCHIG00000006921	XRN2	99	95.886	ENSECAG00000018988	XRN2	96	100.000	Equus_caballus
ENSCHIG00000006921	XRN2	80	100.000	ENSEEUG00000009265	XRN2	80	100.000	Erinaceus_europaeus
ENSCHIG00000006921	XRN2	100	69.980	ENSELUG00000000552	xrn2	100	70.389	Esox_lucius
ENSCHIG00000006921	XRN2	100	96.425	ENSFCAG00000007970	XRN2	100	96.425	Felis_catus
ENSCHIG00000006921	XRN2	100	82.180	ENSFALG00000004508	XRN2	100	82.600	Ficedula_albicollis
ENSCHIG00000006921	XRN2	100	96.215	ENSFDAG00000016311	XRN2	100	96.215	Fukomys_damarensis
ENSCHIG00000006921	XRN2	54	69.466	ENSFHEG00000013039	xrn2	98	69.466	Fundulus_heteroclitus
ENSCHIG00000006921	XRN2	86	72.539	ENSGMOG00000013436	xrn2	100	72.539	Gadus_morhua
ENSCHIG00000006921	XRN2	100	82.304	ENSGALG00000008372	XRN2	100	82.304	Gallus_gallus
ENSCHIG00000006921	XRN2	89	73.372	ENSGAFG00000014284	xrn2	98	73.372	Gambusia_affinis
ENSCHIG00000006921	XRN2	87	74.248	ENSGACG00000011870	xrn2	96	77.413	Gasterosteus_aculeatus
ENSCHIG00000006921	XRN2	100	84.200	ENSGAGG00000004884	XRN2	100	84.719	Gopherus_agassizii
ENSCHIG00000006921	XRN2	100	96.425	ENSGGOG00000013738	XRN2	100	96.425	Gorilla_gorilla
ENSCHIG00000006921	XRN2	54	73.896	ENSHBUG00000005077	xrn2	96	75.833	Haplochromis_burtoni
ENSCHIG00000006921	XRN2	100	95.058	ENSHGLG00000014831	XRN2	100	94.953	Heterocephalus_glaber_female
ENSCHIG00000006921	XRN2	100	95.058	ENSHGLG00100013130	XRN2	100	94.953	Heterocephalus_glaber_male
ENSCHIG00000006921	XRN2	99	67.644	ENSHCOG00000011994	xrn2	99	68.554	Hippocampus_comes
ENSCHIG00000006921	XRN2	100	69.317	ENSIPUG00000006639	xrn2	100	69.317	Ictalurus_punctatus
ENSCHIG00000006921	XRN2	100	96.425	ENSSTOG00000000589	XRN2	100	96.425	Ictidomys_tridecemlineatus
ENSCHIG00000006921	XRN2	100	94.742	ENSJJAG00000022128	Xrn2	100	94.742	Jaculus_jaculus
ENSCHIG00000006921	XRN2	54	78.906	ENSLBEG00000010041	xrn2	100	78.906	Labrus_bergylta
ENSCHIG00000006921	XRN2	94	76.243	ENSLACG00000008307	XRN2	99	79.141	Latimeria_chalumnae
ENSCHIG00000006921	XRN2	99	72.414	ENSLOCG00000016874	xrn2	100	72.414	Lepisosteus_oculatus
ENSCHIG00000006921	XRN2	100	94.637	ENSLAFG00000014624	XRN2	100	94.637	Loxodonta_africana
ENSCHIG00000006921	XRN2	100	96.425	ENSMFAG00000038122	XRN2	100	96.425	Macaca_fascicularis
ENSCHIG00000006921	XRN2	100	96.425	ENSMMUG00000011405	XRN2	100	96.425	Macaca_mulatta
ENSCHIG00000006921	XRN2	100	96.530	ENSMNEG00000040626	XRN2	100	96.530	Macaca_nemestrina
ENSCHIG00000006921	XRN2	100	96.425	ENSMLEG00000041897	XRN2	100	96.425	Mandrillus_leucophaeus
ENSCHIG00000006921	XRN2	95	72.192	ENSMAMG00000008633	xrn2	98	70.693	Mastacembelus_armatus
ENSCHIG00000006921	XRN2	90	74.827	ENSMZEG00005022362	xrn2	97	74.827	Maylandia_zebra
ENSCHIG00000006921	XRN2	99	80.729	ENSMGAG00000003196	XRN2	98	81.847	Meleagris_gallopavo
ENSCHIG00000006921	XRN2	100	94.637	ENSMAUG00000021842	Xrn2	100	94.637	Mesocricetus_auratus
ENSCHIG00000006921	XRN2	100	95.478	ENSMICG00000008126	XRN2	100	95.478	Microcebus_murinus
ENSCHIG00000006921	XRN2	100	94.217	ENSMOCG00000012588	Xrn2	100	94.217	Microtus_ochrogaster
ENSCHIG00000006921	XRN2	89	73.081	ENSMMOG00000017576	xrn2	96	74.194	Mola_mola
ENSCHIG00000006921	XRN2	100	89.485	ENSMODG00000006163	XRN2	100	89.485	Monodelphis_domestica
ENSCHIG00000006921	XRN2	91	71.493	ENSMALG00000011355	xrn2	99	71.493	Monopterus_albus
ENSCHIG00000006921	XRN2	100	93.382	MGP_CAROLIEiJ_G0024400	Xrn2	100	93.382	Mus_caroli
ENSCHIG00000006921	XRN2	100	93.592	ENSMUSG00000027433	Xrn2	100	93.592	Mus_musculus
ENSCHIG00000006921	XRN2	100	93.382	MGP_PahariEiJ_G0025843	Xrn2	100	93.382	Mus_pahari
ENSCHIG00000006921	XRN2	100	93.592	MGP_SPRETEiJ_G0025318	Xrn2	100	93.592	Mus_spretus
ENSCHIG00000006921	XRN2	100	94.835	ENSMPUG00000001198	XRN2	93	94.835	Mustela_putorius_furo
ENSCHIG00000006921	XRN2	100	95.689	ENSMLUG00000001536	XRN2	100	95.689	Myotis_lucifugus
ENSCHIG00000006921	XRN2	100	94.742	ENSNGAG00000018138	Xrn2	100	94.742	Nannospalax_galili
ENSCHIG00000006921	XRN2	90	75.029	ENSNBRG00000008062	xrn2	97	75.029	Neolamprologus_brichardi
ENSCHIG00000006921	XRN2	100	96.320	ENSNLEG00000009991	XRN2	100	96.320	Nomascus_leucogenys
ENSCHIG00000006921	XRN2	66	97.778	ENSMEUG00000008622	-	67	97.778	Notamacropus_eugenii
ENSCHIG00000006921	XRN2	75	79.058	ENSOPRG00000001397	-	77	79.058	Ochotona_princeps
ENSCHIG00000006921	XRN2	100	96.320	ENSODEG00000010745	-	100	96.320	Octodon_degus
ENSCHIG00000006921	XRN2	98	87.177	ENSODEG00000000860	-	99	87.608	Octodon_degus
ENSCHIG00000006921	XRN2	100	70.958	ENSONIG00000018720	xrn2	100	71.164	Oreochromis_niloticus
ENSCHIG00000006921	XRN2	100	90.336	ENSOANG00000015673	XRN2	100	90.336	Ornithorhynchus_anatinus
ENSCHIG00000006921	XRN2	100	96.004	ENSOCUG00000013468	XRN2	100	96.004	Oryctolagus_cuniculus
ENSCHIG00000006921	XRN2	98	69.886	ENSORLG00000017213	xrn2	97	74.480	Oryzias_latipes
ENSCHIG00000006921	XRN2	98	69.886	ENSORLG00020001824	xrn2	100	69.552	Oryzias_latipes_hni
ENSCHIG00000006921	XRN2	98	69.678	ENSORLG00015019747	xrn2	100	69.348	Oryzias_latipes_hsok
ENSCHIG00000006921	XRN2	90	73.788	ENSOMEG00000019820	xrn2	100	69.473	Oryzias_melastigma
ENSCHIG00000006921	XRN2	100	95.063	ENSOGAG00000001068	XRN2	100	95.063	Otolemur_garnettii
ENSCHIG00000006921	XRN2	97	99.892	ENSOARG00000004443	XRN2	100	99.892	Ovis_aries
ENSCHIG00000006921	XRN2	100	96.425	ENSPPAG00000033549	XRN2	100	96.425	Pan_paniscus
ENSCHIG00000006921	XRN2	100	96.425	ENSPPRG00000008732	XRN2	100	96.425	Panthera_pardus
ENSCHIG00000006921	XRN2	97	96.328	ENSPTIG00000015683	XRN2	97	96.328	Panthera_tigris_altaica
ENSCHIG00000006921	XRN2	100	96.425	ENSPTRG00000013308	XRN2	100	96.425	Pan_troglodytes
ENSCHIG00000006921	XRN2	100	96.425	ENSPANG00000018088	XRN2	100	96.425	Papio_anubis
ENSCHIG00000006921	XRN2	100	70.317	ENSPKIG00000016889	xrn2	100	70.317	Paramormyrops_kingsleyae
ENSCHIG00000006921	XRN2	80	86.623	ENSPSIG00000014666	XRN2	100	86.623	Pelodiscus_sinensis
ENSCHIG00000006921	XRN2	100	93.796	ENSPEMG00000000111	Xrn2	100	93.796	Peromyscus_maniculatus_bairdii
ENSCHIG00000006921	XRN2	100	69.191	ENSPFOG00000004182	xrn2	99	69.886	Poecilia_formosa
ENSCHIG00000006921	XRN2	89	74.070	ENSPLAG00000007351	xrn2	96	74.070	Poecilia_latipinna
ENSCHIG00000006921	XRN2	94	67.573	ENSPMEG00000011798	xrn2	99	68.444	Poecilia_mexicana
ENSCHIG00000006921	XRN2	89	73.953	ENSPREG00000012452	xrn2	99	72.391	Poecilia_reticulata
ENSCHIG00000006921	XRN2	100	95.899	ENSPPYG00000010755	XRN2	100	95.899	Pongo_abelii
ENSCHIG00000006921	XRN2	100	89.927	ENSPCAG00000011191	XRN2	100	89.927	Procavia_capensis
ENSCHIG00000006921	XRN2	100	89.586	ENSPCOG00000016468	XRN2	100	89.586	Propithecus_coquereli
ENSCHIG00000006921	XRN2	93	93.030	ENSPVAG00000004596	XRN2	93	93.030	Pteropus_vampyrus
ENSCHIG00000006921	XRN2	90	72.864	ENSPNYG00000001765	xrn2	97	72.864	Pundamilia_nyererei
ENSCHIG00000006921	XRN2	100	70.744	ENSPNAG00000010956	xrn2	99	70.744	Pygocentrus_nattereri
ENSCHIG00000006921	XRN2	100	94.433	ENSRNOG00000011785	Xrn2	100	94.433	Rattus_norvegicus
ENSCHIG00000006921	XRN2	86	96.577	ENSRBIG00000036193	XRN2	100	96.577	Rhinopithecus_bieti
ENSCHIG00000006921	XRN2	100	96.425	ENSRROG00000044400	XRN2	90	96.425	Rhinopithecus_roxellana
ENSCHIG00000006921	XRN2	79	51.598	YOR048C	RAT1	79	53.125	Saccharomyces_cerevisiae
ENSCHIG00000006921	XRN2	100	96.215	ENSSBOG00000021014	XRN2	100	96.215	Saimiri_boliviensis_boliviensis
ENSCHIG00000006921	XRN2	100	71.207	ENSSFOG00015001091	xrn2	100	71.207	Scleropages_formosus
ENSCHIG00000006921	XRN2	92	72.943	ENSSMAG00000007834	xrn2	100	68.623	Scophthalmus_maximus
ENSCHIG00000006921	XRN2	92	71.059	ENSSDUG00000012802	xrn2	99	71.396	Seriola_dumerili
ENSCHIG00000006921	XRN2	93	73.138	ENSSLDG00000021273	xrn2	100	73.138	Seriola_lalandi_dorsalis
ENSCHIG00000006921	XRN2	76	100.000	ENSSARG00000005859	-	76	100.000	Sorex_araneus
ENSCHIG00000006921	XRN2	98	79.167	ENSSPUG00000005485	XRN2	99	77.353	Sphenodon_punctatus
ENSCHIG00000006921	XRN2	100	70.113	ENSSPAG00000016027	xrn2	99	70.113	Stegastes_partitus
ENSCHIG00000006921	XRN2	100	95.478	ENSSSCG00000007109	XRN2	100	95.478	Sus_scrofa
ENSCHIG00000006921	XRN2	100	81.211	ENSTGUG00000007535	XRN2	100	81.628	Taeniopygia_guttata
ENSCHIG00000006921	XRN2	100	67.709	ENSTRUG00000015489	xrn2	100	68.081	Takifugu_rubripes
ENSCHIG00000006921	XRN2	100	70.539	ENSTNIG00000010712	xrn2	100	70.539	Tetraodon_nigroviridis
ENSCHIG00000006921	XRN2	100	95.478	ENSTBEG00000004119	XRN2	100	95.478	Tupaia_belangeri
ENSCHIG00000006921	XRN2	93	97.838	ENSTTRG00000009087	XRN2	93	97.838	Tursiops_truncatus
ENSCHIG00000006921	XRN2	100	96.635	ENSUAMG00000024634	XRN2	100	96.635	Ursus_americanus
ENSCHIG00000006921	XRN2	97	96.328	ENSUMAG00000004012	XRN2	95	96.328	Ursus_maritimus
ENSCHIG00000006921	XRN2	89	89.125	ENSVPAG00000010694	XRN2	91	89.125	Vicugna_pacos
ENSCHIG00000006921	XRN2	100	96.635	ENSVVUG00000012178	XRN2	100	96.635	Vulpes_vulpes
ENSCHIG00000006921	XRN2	100	73.931	ENSXETG00000023501	xrn2	100	74.557	Xenopus_tropicalis
ENSCHIG00000006921	XRN2	100	68.243	ENSXMAG00000000242	xrn2	92	78.589	Xiphophorus_maculatus