EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000007030 (Gene tree)
Gene ID: 102190177
Gene Symbol: TRNT1
Alias: CCA1|CGI-47|MtCCA
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 93066 bases
Position: chr22:22999502-23092567
Accession: 102190177
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000003159	PolyA_pol	PF01743.20	2.9e-33	1	1
ENSCHIP00000003163	PolyA_pol	PF01743.20	2.9e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000009491	TRNT1-201	3209	XM_018067189	ENSCHIP00000003159	436 (aa)	XP_017922678	UPI0003AF5E3F
ENSCHIT00000009500	TRNT1-202	1612	-	ENSCHIP00000003163	436 (aa)	-	UPI0003AF5E3F

Gene Model

Click here to download ENSCHIG00000007030's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000007030's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000007030	TRNT1	99	90.783	ENSG00000072756	TRNT1	100	90.783	Homo_sapiens
ENSCHIG00000007030	TRNT1	98	66.434	ENSAPOG00000013687	trnt1	99	66.434	Acanthochromis_polyacanthus
ENSCHIG00000007030	TRNT1	99	90.826	ENSAMEG00000014520	TRNT1	100	90.826	Ailuropoda_melanoleuca
ENSCHIG00000007030	TRNT1	97	67.529	ENSACIG00000021706	trnt1	99	67.529	Amphilophus_citrinellus
ENSCHIG00000007030	TRNT1	97	67.765	ENSAOCG00000024612	trnt1	99	67.765	Amphiprion_ocellaris
ENSCHIG00000007030	TRNT1	94	61.463	ENSAPEG00000022627	trnt1	95	61.463	Amphiprion_percula
ENSCHIG00000007030	TRNT1	92	69.975	ENSATEG00000008928	trnt1	99	69.975	Anabas_testudineus
ENSCHIG00000007030	TRNT1	89	77.778	ENSAPLG00000004258	TRNT1	96	77.778	Anas_platyrhynchos
ENSCHIG00000007030	TRNT1	98	74.884	ENSACAG00000005657	TRNT1	98	74.884	Anolis_carolinensis
ENSCHIG00000007030	TRNT1	99	91.475	ENSANAG00000024802	TRNT1	100	91.475	Aotus_nancymaae
ENSCHIG00000007030	TRNT1	97	66.353	ENSACLG00000022227	trnt1	99	66.353	Astatotilapia_calliptera
ENSCHIG00000007030	TRNT1	99	67.907	ENSAMXG00000003960	trnt1	99	67.907	Astyanax_mexicanus
ENSCHIG00000007030	TRNT1	99	98.157	ENSBTAG00000019534	TRNT1	100	98.157	Bos_taurus
ENSCHIG00000007030	TRNT1	93	44.181	WBGene00010089	hpo-31	94	44.181	Caenorhabditis_elegans
ENSCHIG00000007030	TRNT1	99	91.475	ENSCJAG00000015466	TRNT1	100	91.475	Callithrix_jacchus
ENSCHIG00000007030	TRNT1	99	91.014	ENSCAFG00000005985	TRNT1	99	91.014	Canis_familiaris
ENSCHIG00000007030	TRNT1	99	91.014	ENSCAFG00020014746	TRNT1	99	91.014	Canis_lupus_dingo
ENSCHIG00000007030	TRNT1	99	91.244	ENSTSYG00000013390	TRNT1	100	91.244	Carlito_syrichta
ENSCHIG00000007030	TRNT1	87	74.339	ENSCAPG00000006891	TRNT1	100	74.339	Cavia_aperea
ENSCHIG00000007030	TRNT1	99	90.069	ENSCPOG00000007849	TRNT1	99	90.069	Cavia_porcellus
ENSCHIG00000007030	TRNT1	95	88.942	ENSCCAG00000002919	TRNT1	100	91.022	Cebus_capucinus
ENSCHIG00000007030	TRNT1	99	91.224	ENSCATG00000031985	TRNT1	99	91.224	Cercocebus_atys
ENSCHIG00000007030	TRNT1	99	90.300	ENSCLAG00000005186	TRNT1	99	90.300	Chinchilla_lanigera
ENSCHIG00000007030	TRNT1	99	91.705	ENSCSAG00000011052	TRNT1	100	91.705	Chlorocebus_sabaeus
ENSCHIG00000007030	TRNT1	84	89.604	ENSCHOG00000005712	TRNT1	85	89.604	Choloepus_hoffmanni
ENSCHIG00000007030	TRNT1	94	80.392	ENSCPBG00000017636	TRNT1	93	80.392	Chrysemys_picta_bellii
ENSCHIG00000007030	TRNT1	92	44.526	ENSCING00000007069	-	99	44.526	Ciona_intestinalis
ENSCHIG00000007030	TRNT1	97	44.340	ENSCSAVG00000007494	-	99	44.340	Ciona_savignyi
ENSCHIG00000007030	TRNT1	99	91.244	ENSCANG00000039030	TRNT1	100	91.244	Colobus_angolensis_palliatus
ENSCHIG00000007030	TRNT1	99	91.475	ENSCGRG00001009998	Trnt1	100	91.475	Cricetulus_griseus_chok1gshd
ENSCHIG00000007030	TRNT1	99	91.475	ENSCGRG00000013410	Trnt1	100	91.475	Cricetulus_griseus_crigri
ENSCHIG00000007030	TRNT1	93	68.305	ENSCSEG00000008157	trnt1	96	68.305	Cynoglossus_semilaevis
ENSCHIG00000007030	TRNT1	93	68.059	ENSCVAG00000019770	trnt1	96	68.059	Cyprinodon_variegatus
ENSCHIG00000007030	TRNT1	97	68.246	ENSDARG00000075297	trnt1	97	68.246	Danio_rerio
ENSCHIG00000007030	TRNT1	99	88.710	ENSDNOG00000008837	TRNT1	100	88.710	Dasypus_novemcinctus
ENSCHIG00000007030	TRNT1	99	88.479	ENSDORG00000014035	Trnt1	100	88.479	Dipodomys_ordii
ENSCHIG00000007030	TRNT1	92	49.257	FBgn0037369	CG2100	83	49.257	Drosophila_melanogaster
ENSCHIG00000007030	TRNT1	57	87.952	ENSETEG00000018177	TRNT1	100	87.952	Echinops_telfairi
ENSCHIG00000007030	TRNT1	92	62.283	ENSEBUG00000012779	-	95	62.283	Eptatretus_burgeri
ENSCHIG00000007030	TRNT1	99	91.705	ENSEASG00005003577	TRNT1	100	91.705	Equus_asinus_asinus
ENSCHIG00000007030	TRNT1	99	91.935	ENSECAG00000014420	TRNT1	100	91.935	Equus_caballus
ENSCHIG00000007030	TRNT1	99	89.171	ENSEEUG00000009567	TRNT1	100	89.171	Erinaceus_europaeus
ENSCHIG00000007030	TRNT1	98	67.133	ENSELUG00000003802	trnt1	99	67.133	Esox_lucius
ENSCHIG00000007030	TRNT1	99	91.475	ENSFCAG00000026805	TRNT1	99	91.475	Felis_catus
ENSCHIG00000007030	TRNT1	88	75.325	ENSFALG00000013539	TRNT1	100	75.325	Ficedula_albicollis
ENSCHIG00000007030	TRNT1	99	90.069	ENSFDAG00000018412	TRNT1	99	90.069	Fukomys_damarensis
ENSCHIG00000007030	TRNT1	95	66.430	ENSFHEG00000019294	trnt1	99	66.430	Fundulus_heteroclitus
ENSCHIG00000007030	TRNT1	95	65.783	ENSGMOG00000007460	trnt1	96	65.783	Gadus_morhua
ENSCHIG00000007030	TRNT1	98	71.462	ENSGALG00000017368	TRNT1	99	71.462	Gallus_gallus
ENSCHIG00000007030	TRNT1	95	66.667	ENSGAFG00000008647	trnt1	99	66.667	Gambusia_affinis
ENSCHIG00000007030	TRNT1	93	66.585	ENSGACG00000011903	trnt1	96	67.277	Gasterosteus_aculeatus
ENSCHIG00000007030	TRNT1	95	79.567	ENSGAGG00000020942	TRNT1	95	79.567	Gopherus_agassizii
ENSCHIG00000007030	TRNT1	99	91.014	ENSGGOG00000015286	TRNT1	100	91.014	Gorilla_gorilla
ENSCHIG00000007030	TRNT1	97	66.353	ENSHBUG00000002797	trnt1	99	66.353	Haplochromis_burtoni
ENSCHIG00000007030	TRNT1	99	85.484	ENSHGLG00000000221	-	99	85.484	Heterocephalus_glaber_female
ENSCHIG00000007030	TRNT1	99	89.607	ENSHGLG00000003649	TRNT1	99	89.607	Heterocephalus_glaber_female
ENSCHIG00000007030	TRNT1	99	88.684	ENSHGLG00100016421	TRNT1	99	88.684	Heterocephalus_glaber_male
ENSCHIG00000007030	TRNT1	93	66.585	ENSHCOG00000010618	trnt1	95	66.585	Hippocampus_comes
ENSCHIG00000007030	TRNT1	95	67.788	ENSIPUG00000000971	trnt1	97	67.788	Ictalurus_punctatus
ENSCHIG00000007030	TRNT1	100	86.697	ENSSTOG00000000150	TRNT1	98	90.594	Ictidomys_tridecemlineatus
ENSCHIG00000007030	TRNT1	99	90.323	ENSJJAG00000018561	Trnt1	99	90.323	Jaculus_jaculus
ENSCHIG00000007030	TRNT1	95	66.274	ENSKMAG00000011307	trnt1	99	66.274	Kryptolebias_marmoratus
ENSCHIG00000007030	TRNT1	94	62.683	ENSLBEG00000019457	trnt1	97	62.683	Labrus_bergylta
ENSCHIG00000007030	TRNT1	95	73.735	ENSLACG00000013227	TRNT1	96	73.735	Latimeria_chalumnae
ENSCHIG00000007030	TRNT1	98	68.433	ENSLOCG00000011105	trnt1	98	68.433	Lepisosteus_oculatus
ENSCHIG00000007030	TRNT1	99	90.783	ENSLAFG00000023191	TRNT1	100	90.783	Loxodonta_africana
ENSCHIG00000007030	TRNT1	99	91.455	ENSMFAG00000045113	TRNT1	99	91.455	Macaca_fascicularis
ENSCHIG00000007030	TRNT1	99	91.455	ENSMMUG00000017983	TRNT1	99	91.455	Macaca_mulatta
ENSCHIG00000007030	TRNT1	99	91.455	ENSMNEG00000037805	TRNT1	99	91.455	Macaca_nemestrina
ENSCHIG00000007030	TRNT1	88	93.194	ENSMLEG00000033671	TRNT1	99	93.194	Mandrillus_leucophaeus
ENSCHIG00000007030	TRNT1	97	68.000	ENSMAMG00000023401	trnt1	99	68.000	Mastacembelus_armatus
ENSCHIG00000007030	TRNT1	97	66.353	ENSMZEG00005009141	trnt1	99	66.353	Maylandia_zebra
ENSCHIG00000007030	TRNT1	74	73.832	ENSMGAG00000009971	TRNT1	100	73.832	Meleagris_gallopavo
ENSCHIG00000007030	TRNT1	99	91.014	ENSMAUG00000020707	Trnt1	100	91.014	Mesocricetus_auratus
ENSCHIG00000007030	TRNT1	99	91.244	ENSMICG00000016615	TRNT1	100	91.244	Microcebus_murinus
ENSCHIG00000007030	TRNT1	99	91.014	ENSMOCG00000004539	Trnt1	100	91.014	Microtus_ochrogaster
ENSCHIG00000007030	TRNT1	97	65.647	ENSMMOG00000010742	trnt1	99	65.647	Mola_mola
ENSCHIG00000007030	TRNT1	99	82.488	ENSMODG00000004368	TRNT1	100	82.488	Monodelphis_domestica
ENSCHIG00000007030	TRNT1	97	66.118	ENSMALG00000008376	trnt1	99	66.118	Monopterus_albus
ENSCHIG00000007030	TRNT1	99	91.475	MGP_CAROLIEiJ_G0028698	Trnt1	100	91.475	Mus_caroli
ENSCHIG00000007030	TRNT1	99	91.475	ENSMUSG00000013736	Trnt1	100	91.475	Mus_musculus
ENSCHIG00000007030	TRNT1	99	90.783	MGP_PahariEiJ_G0022449	Trnt1	100	90.783	Mus_pahari
ENSCHIG00000007030	TRNT1	99	91.475	MGP_SPRETEiJ_G0029726	Trnt1	100	91.475	Mus_spretus
ENSCHIG00000007030	TRNT1	99	91.475	ENSMPUG00000017017	TRNT1	99	91.475	Mustela_putorius_furo
ENSCHIG00000007030	TRNT1	89	87.824	ENSMLUG00000011864	TRNT1	100	87.824	Myotis_lucifugus
ENSCHIG00000007030	TRNT1	99	89.862	ENSNGAG00000000537	Trnt1	100	89.862	Nannospalax_galili
ENSCHIG00000007030	TRNT1	79	66.667	ENSNBRG00000023606	trnt1	99	66.667	Neolamprologus_brichardi
ENSCHIG00000007030	TRNT1	99	91.935	ENSNLEG00000003226	TRNT1	100	91.935	Nomascus_leucogenys
ENSCHIG00000007030	TRNT1	99	82.258	ENSMEUG00000004684	TRNT1	100	82.258	Notamacropus_eugenii
ENSCHIG00000007030	TRNT1	88	79.634	ENSOPRG00000015067	TRNT1	99	79.634	Ochotona_princeps
ENSCHIG00000007030	TRNT1	99	90.531	ENSODEG00000007597	TRNT1	99	90.531	Octodon_degus
ENSCHIG00000007030	TRNT1	97	66.824	ENSONIG00000020273	trnt1	98	66.824	Oreochromis_niloticus
ENSCHIG00000007030	TRNT1	99	74.306	ENSOANG00000007514	TRNT1	99	74.306	Ornithorhynchus_anatinus
ENSCHIG00000007030	TRNT1	99	85.253	ENSOCUG00000008580	TRNT1	99	85.253	Oryctolagus_cuniculus
ENSCHIG00000007030	TRNT1	97	64.929	ENSORLG00000003165	trnt1	99	64.929	Oryzias_latipes
ENSCHIG00000007030	TRNT1	97	65.166	ENSORLG00020022060	trnt1	99	65.166	Oryzias_latipes_hni
ENSCHIG00000007030	TRNT1	97	64.455	ENSORLG00015018915	trnt1	99	64.455	Oryzias_latipes_hsok
ENSCHIG00000007030	TRNT1	94	64.078	ENSOMEG00000003331	trnt1	97	64.078	Oryzias_melastigma
ENSCHIG00000007030	TRNT1	100	99.771	ENSOARG00000008631	TRNT1	100	99.771	Ovis_aries
ENSCHIG00000007030	TRNT1	99	91.014	ENSPPAG00000043566	TRNT1	100	91.014	Pan_paniscus
ENSCHIG00000007030	TRNT1	99	91.224	ENSPPRG00000001327	TRNT1	99	91.224	Panthera_pardus
ENSCHIG00000007030	TRNT1	99	91.475	ENSPTIG00000011448	TRNT1	99	91.475	Panthera_tigris_altaica
ENSCHIG00000007030	TRNT1	99	91.014	ENSPTRG00000014564	TRNT1	100	91.014	Pan_troglodytes
ENSCHIG00000007030	TRNT1	99	91.224	ENSPANG00000025944	TRNT1	99	91.224	Papio_anubis
ENSCHIG00000007030	TRNT1	94	69.682	ENSPKIG00000020015	trnt1	95	69.682	Paramormyrops_kingsleyae
ENSCHIG00000007030	TRNT1	91	79.345	ENSPSIG00000017356	TRNT1	99	80.556	Pelodiscus_sinensis
ENSCHIG00000007030	TRNT1	97	65.882	ENSPMGG00000008888	trnt1	98	65.882	Periophthalmus_magnuspinnatus
ENSCHIG00000007030	TRNT1	99	91.705	ENSPEMG00000019845	Trnt1	100	91.705	Peromyscus_maniculatus_bairdii
ENSCHIG00000007030	TRNT1	99	82.719	ENSPCIG00000030436	TRNT1	100	82.719	Phascolarctos_cinereus
ENSCHIG00000007030	TRNT1	95	66.986	ENSPFOG00000006194	trnt1	98	66.986	Poecilia_formosa
ENSCHIG00000007030	TRNT1	95	66.986	ENSPLAG00000015623	trnt1	99	67.990	Poecilia_latipinna
ENSCHIG00000007030	TRNT1	95	66.986	ENSPMEG00000012216	trnt1	99	67.990	Poecilia_mexicana
ENSCHIG00000007030	TRNT1	95	66.430	ENSPREG00000021470	trnt1	99	66.430	Poecilia_reticulata
ENSCHIG00000007030	TRNT1	99	91.475	ENSPPYG00000013702	TRNT1	100	91.475	Pongo_abelii
ENSCHIG00000007030	TRNT1	88	89.817	ENSPCAG00000001951	TRNT1	100	89.817	Procavia_capensis
ENSCHIG00000007030	TRNT1	99	92.166	ENSPCOG00000022228	TRNT1	100	92.166	Propithecus_coquereli
ENSCHIG00000007030	TRNT1	88	90.365	ENSPVAG00000008784	TRNT1	100	90.365	Pteropus_vampyrus
ENSCHIG00000007030	TRNT1	97	66.353	ENSPNYG00000003120	trnt1	99	66.353	Pundamilia_nyererei
ENSCHIG00000007030	TRNT1	98	66.977	ENSPNAG00000000565	trnt1	99	66.977	Pygocentrus_nattereri
ENSCHIG00000007030	TRNT1	99	91.014	ENSRNOG00000006432	Trnt1	100	91.014	Rattus_norvegicus
ENSCHIG00000007030	TRNT1	99	88.710	ENSRBIG00000042632	TRNT1	100	88.710	Rhinopithecus_bieti
ENSCHIG00000007030	TRNT1	99	91.014	ENSRROG00000036866	TRNT1	100	91.014	Rhinopithecus_roxellana
ENSCHIG00000007030	TRNT1	99	91.475	ENSSBOG00000021208	TRNT1	100	91.475	Saimiri_boliviensis_boliviensis
ENSCHIG00000007030	TRNT1	99	82.719	ENSSHAG00000018861	TRNT1	100	82.719	Sarcophilus_harrisii
ENSCHIG00000007030	TRNT1	99	67.512	ENSSFOG00015020844	trnt1	99	67.757	Scleropages_formosus
ENSCHIG00000007030	TRNT1	97	67.059	ENSSMAG00000015432	trnt1	97	67.059	Scophthalmus_maximus
ENSCHIG00000007030	TRNT1	97	66.353	ENSSDUG00000012320	trnt1	99	66.353	Seriola_dumerili
ENSCHIG00000007030	TRNT1	97	66.353	ENSSLDG00000009325	trnt1	99	66.353	Seriola_lalandi_dorsalis
ENSCHIG00000007030	TRNT1	55	64.017	ENSSLDG00000016463	-	91	64.017	Seriola_lalandi_dorsalis
ENSCHIG00000007030	TRNT1	88	80.990	ENSSPUG00000014153	TRNT1	100	80.990	Sphenodon_punctatus
ENSCHIG00000007030	TRNT1	97	66.118	ENSSPAG00000021005	trnt1	99	66.118	Stegastes_partitus
ENSCHIG00000007030	TRNT1	99	94.931	ENSSSCG00000011529	TRNT1	100	94.931	Sus_scrofa
ENSCHIG00000007030	TRNT1	93	75.062	ENSTGUG00000010192	TRNT1	99	75.062	Taeniopygia_guttata
ENSCHIG00000007030	TRNT1	97	66.824	ENSTRUG00000001088	trnt1	99	66.824	Takifugu_rubripes
ENSCHIG00000007030	TRNT1	98	67.290	ENSTNIG00000007363	trnt1	99	67.290	Tetraodon_nigroviridis
ENSCHIG00000007030	TRNT1	70	74.157	ENSTBEG00000006367	TRNT1	100	74.157	Tupaia_belangeri
ENSCHIG00000007030	TRNT1	99	95.853	ENSTTRG00000007803	TRNT1	100	95.853	Tursiops_truncatus
ENSCHIG00000007030	TRNT1	99	90.323	ENSUAMG00000022574	TRNT1	99	90.323	Ursus_americanus
ENSCHIG00000007030	TRNT1	99	90.783	ENSUMAG00000024092	TRNT1	99	90.783	Ursus_maritimus
ENSCHIG00000007030	TRNT1	99	91.244	ENSVVUG00000012810	TRNT1	99	91.244	Vulpes_vulpes
ENSCHIG00000007030	TRNT1	97	63.636	ENSXETG00000025091	trnt1	99	65.920	Xenopus_tropicalis
ENSCHIG00000007030	TRNT1	95	66.903	ENSXCOG00000010150	trnt1	99	66.903	Xiphophorus_couchianus
ENSCHIG00000007030	TRNT1	95	66.667	ENSXMAG00000002227	trnt1	99	66.667	Xiphophorus_maculatus