EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000007262 (Gene tree)
Gene ID: 102169953
Gene Symbol: SAFB
Alias: HET|SAFB1
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 65436 bases
Position: chr7:91841985-91907420
Accession: 102169953
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000003434	RRM_5	PF13893.6	9.2e-07	1	1
ENSCHIP00000003336	RRM_5	PF13893.6	9.3e-07	1	1
ENSCHIP00000003424	RRM_5	PF13893.6	9.6e-07	1	1
ENSCHIP00000003291	RRM_1	PF00076.22	8.4e-14	1	1
ENSCHIP00000003305	RRM_1	PF00076.22	8.4e-14	1	1
ENSCHIP00000003322	RRM_1	PF00076.22	8.4e-14	1	1
ENSCHIP00000003434	RRM_1	PF00076.22	3.8e-13	1	1
ENSCHIP00000003424	RRM_1	PF00076.22	3.9e-13	1	1
ENSCHIP00000003336	RRM_1	PF00076.22	4e-13	1	1
ENSCHIP00000003370	SAP	PF02037.27	1.3e-10	1	1
ENSCHIP00000003291	SAP	PF02037.27	7e-10	1	1
ENSCHIP00000003305	SAP	PF02037.27	7e-10	1	1
ENSCHIP00000003322	SAP	PF02037.27	7e-10	1	1
ENSCHIP00000003434	SAP	PF02037.27	7.5e-10	1	1
ENSCHIP00000003336	SAP	PF02037.27	7.6e-10	1	1
ENSCHIP00000003424	SAP	PF02037.27	7.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000010106	SAFB-203	2703	-	ENSCHIP00000003322	900 (aa)	-	UPI000D194F4E
ENSCHIT00000010364	SAFB-207	2700	XM_018050904	ENSCHIP00000003434	899 (aa)	XP_017906393	UPI000D18DF78
ENSCHIT00000010350	SAFB-206	2742	-	ENSCHIP00000003424	913 (aa)	-	UPI000D192785
ENSCHIT00000010059	SAFB-202	2703	-	ENSCHIP00000003305	900 (aa)	-	UPI000D194F4E
ENSCHIT00000010242	SAFB-205	1084	-	ENSCHIP00000003370	215 (aa)	-	UPI000D1958B8
ENSCHIT00000010146	SAFB-204	2703	-	ENSCHIP00000003336	900 (aa)	-	UPI000D193C1E
ENSCHIT00000010020	SAFB-201	7697	-	ENSCHIP00000003291	900 (aa)	-	UPI000D194F4E

Gene Model

Click here to download ENSCHIG00000007262's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000007262's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000007262	SAFB	100	63.836	ENSCHIG00000024547	SAFB2	98	68.906

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000007262	SAFB	98	92.453	ENSG00000160633	SAFB	100	87.459	Homo_sapiens
ENSCHIG00000007262	SAFB	91	43.728	ENSAPOG00000022508	safb	95	43.842	Acanthochromis_polyacanthus
ENSCHIG00000007262	SAFB	100	88.587	ENSAMEG00000012254	SAFB	98	89.397	Ailuropoda_melanoleuca
ENSCHIG00000007262	SAFB	95	39.274	ENSACIG00000006247	safb	99	40.247	Amphilophus_citrinellus
ENSCHIG00000007262	SAFB	93	43.464	ENSAOCG00000006308	safb	98	44.191	Amphiprion_ocellaris
ENSCHIG00000007262	SAFB	91	43.986	ENSAPEG00000023342	safb	95	44.094	Amphiprion_percula
ENSCHIG00000007262	SAFB	95	42.217	ENSATEG00000004998	safb	95	43.660	Anabas_testudineus
ENSCHIG00000007262	SAFB	93	63.268	ENSAPLG00000005780	-	100	63.152	Anas_platyrhynchos
ENSCHIG00000007262	SAFB	65	65.248	ENSAPLG00000006355	-	99	63.464	Anas_platyrhynchos
ENSCHIG00000007262	SAFB	78	50.068	ENSACAG00000016893	-	95	50.800	Anolis_carolinensis
ENSCHIG00000007262	SAFB	98	92.925	ENSANAG00000028821	SAFB	100	88.004	Aotus_nancymaae
ENSCHIG00000007262	SAFB	94	41.639	ENSACLG00000001926	safb	95	43.964	Astatotilapia_calliptera
ENSCHIG00000007262	SAFB	95	43.736	ENSAMXG00000018154	safb	98	44.530	Astyanax_mexicanus
ENSCHIG00000007262	SAFB	100	98.228	ENSBTAG00000007875	SAFB	100	98.228	Bos_taurus
ENSCHIG00000007262	SAFB	85	92.350	ENSBTAG00000051794	-	91	95.580	Bos_taurus
ENSCHIG00000007262	SAFB	99	92.523	ENSCJAG00000017081	SAFB	100	93.868	Callithrix_jacchus
ENSCHIG00000007262	SAFB	98	92.925	ENSCAFG00000018803	SAFB	87	89.869	Canis_familiaris
ENSCHIG00000007262	SAFB	98	92.925	ENSCAFG00020018943	SAFB	100	89.869	Canis_lupus_dingo
ENSCHIG00000007262	SAFB	58	74.388	ENSTSYG00000001851	-	100	74.200	Carlito_syrichta
ENSCHIG00000007262	SAFB	98	89.623	ENSCPOG00000026322	SAFB	100	82.784	Cavia_porcellus
ENSCHIG00000007262	SAFB	98	92.453	ENSCCAG00000020193	SAFB	100	88.126	Cebus_capucinus
ENSCHIG00000007262	SAFB	98	91.981	ENSCATG00000029994	SAFB	100	87.786	Cercocebus_atys
ENSCHIG00000007262	SAFB	98	91.981	ENSCLAG00000007734	SAFB	100	84.632	Chinchilla_lanigera
ENSCHIG00000007262	SAFB	98	91.981	ENSCSAG00000009949	SAFB	100	87.677	Chlorocebus_sabaeus
ENSCHIG00000007262	SAFB	87	79.920	ENSCHOG00000003208	SAFB	93	80.556	Choloepus_hoffmanni
ENSCHIG00000007262	SAFB	91	63.170	ENSCPBG00000010928	-	99	63.744	Chrysemys_picta_bellii
ENSCHIG00000007262	SAFB	91	60.226	ENSCPBG00000010936	-	99	60.565	Chrysemys_picta_bellii
ENSCHIG00000007262	SAFB	100	82.443	ENSCANG00000019754	-	100	82.443	Colobus_angolensis_palliatus
ENSCHIG00000007262	SAFB	98	92.453	ENSCANG00000004774	-	100	88.889	Colobus_angolensis_palliatus
ENSCHIG00000007262	SAFB	100	79.766	ENSCGRG00001002254	Safb	100	79.766	Cricetulus_griseus_chok1gshd
ENSCHIG00000007262	SAFB	90	77.090	ENSCGRG00000011529	Safb	96	77.090	Cricetulus_griseus_crigri
ENSCHIG00000007262	SAFB	95	40.957	ENSCSEG00000019870	safb	98	40.345	Cynoglossus_semilaevis
ENSCHIG00000007262	SAFB	95	39.773	ENSCVAG00000002226	safb	63	45.855	Cyprinodon_variegatus
ENSCHIG00000007262	SAFB	91	41.965	ENSDARG00000020467	safb	99	44.077	Danio_rerio
ENSCHIG00000007262	SAFB	98	92.925	ENSDNOG00000015746	SAFB	95	88.668	Dasypus_novemcinctus
ENSCHIG00000007262	SAFB	98	86.792	ENSDORG00000016200	Safb	100	79.702	Dipodomys_ordii
ENSCHIG00000007262	SAFB	73	81.349	ENSETEG00000018679	SAFB	76	84.615	Echinops_telfairi
ENSCHIG00000007262	SAFB	100	84.599	ENSEASG00005023019	SAFB	100	83.297	Equus_asinus_asinus
ENSCHIG00000007262	SAFB	100	86.587	ENSECAG00000018659	SAFB	89	86.696	Equus_caballus
ENSCHIG00000007262	SAFB	96	42.354	ENSELUG00000022327	safb	98	45.246	Esox_lucius
ENSCHIG00000007262	SAFB	98	91.509	ENSFCAG00000011835	SAFB	100	89.434	Felis_catus
ENSCHIG00000007262	SAFB	58	58.824	ENSFALG00000013881	-	99	60.815	Ficedula_albicollis
ENSCHIG00000007262	SAFB	100	63.351	ENSFALG00000013882	-	89	63.951	Ficedula_albicollis
ENSCHIG00000007262	SAFB	98	89.623	ENSFDAG00000020306	SAFB	100	84.351	Fukomys_damarensis
ENSCHIG00000007262	SAFB	54	55.462	ENSFHEG00000004219	safb	63	46.372	Fundulus_heteroclitus
ENSCHIG00000007262	SAFB	95	40.565	ENSGMOG00000014280	safb	98	40.909	Gadus_morhua
ENSCHIG00000007262	SAFB	94	60.488	ENSGALG00000001948	-	97	62.513	Gallus_gallus
ENSCHIG00000007262	SAFB	100	63.312	ENSGALG00000013365	-	97	63.911	Gallus_gallus
ENSCHIG00000007262	SAFB	95	38.022	ENSGAFG00000016162	safb	98	39.893	Gambusia_affinis
ENSCHIG00000007262	SAFB	95	42.431	ENSGACG00000011385	safb	95	42.158	Gasterosteus_aculeatus
ENSCHIG00000007262	SAFB	99	59.916	ENSGAGG00000008424	-	97	62.625	Gopherus_agassizii
ENSCHIG00000007262	SAFB	73	57.481	ENSGAGG00000017702	-	100	57.738	Gopherus_agassizii
ENSCHIG00000007262	SAFB	98	92.453	ENSGGOG00000015109	SAFB	100	87.241	Gorilla_gorilla
ENSCHIG00000007262	SAFB	95	39.629	ENSHBUG00000009218	safb	97	40.893	Haplochromis_burtoni
ENSCHIG00000007262	SAFB	98	90.566	ENSHGLG00000015883	SAFB	100	84.582	Heterocephalus_glaber_female
ENSCHIG00000007262	SAFB	93	38.908	ENSHCOG00000001705	safb	99	39.359	Hippocampus_comes
ENSCHIG00000007262	SAFB	65	57.241	ENSIPUG00000024869	safb2	98	45.494	Ictalurus_punctatus
ENSCHIG00000007262	SAFB	93	85.632	ENSSTOG00000002783	SAFB	100	85.632	Ictidomys_tridecemlineatus
ENSCHIG00000007262	SAFB	98	82.710	ENSJJAG00000009021	Safb	98	81.461	Jaculus_jaculus
ENSCHIG00000007262	SAFB	91	42.640	ENSKMAG00000022308	safb	95	42.081	Kryptolebias_marmoratus
ENSCHIG00000007262	SAFB	95	42.018	ENSLBEG00000006015	safb	95	44.667	Labrus_bergylta
ENSCHIG00000007262	SAFB	86	50.769	ENSLACG00000018090	SAFB	100	52.792	Latimeria_chalumnae
ENSCHIG00000007262	SAFB	96	47.228	ENSLOCG00000003613	safb	99	48.347	Lepisosteus_oculatus
ENSCHIG00000007262	SAFB	98	91.080	ENSLAFG00000003840	SAFB	98	85.967	Loxodonta_africana
ENSCHIG00000007262	SAFB	98	91.981	ENSMFAG00000003885	SAFB	100	87.691	Macaca_fascicularis
ENSCHIG00000007262	SAFB	98	91.981	ENSMMUG00000017970	SAFB	100	87.786	Macaca_mulatta
ENSCHIG00000007262	SAFB	95	91.220	ENSMNEG00000035637	SAFB	100	84.632	Macaca_nemestrina
ENSCHIG00000007262	SAFB	95	91.220	ENSMLEG00000038637	SAFB	100	82.604	Mandrillus_leucophaeus
ENSCHIG00000007262	SAFB	97	41.139	ENSMAMG00000003357	safb	89	43.506	Mastacembelus_armatus
ENSCHIG00000007262	SAFB	94	41.804	ENSMZEG00005009120	safb	95	44.196	Maylandia_zebra
ENSCHIG00000007262	SAFB	85	65.217	ENSMGAG00000001051	-	100	61.212	Meleagris_gallopavo
ENSCHIG00000007262	SAFB	97	61.814	ENSMGAG00000001101	-	100	61.926	Meleagris_gallopavo
ENSCHIG00000007262	SAFB	52	84.805	ENSMAUG00000005013	Safb	100	84.805	Mesocricetus_auratus
ENSCHIG00000007262	SAFB	98	88.679	ENSMICG00000008739	-	100	85.963	Microcebus_murinus
ENSCHIG00000007262	SAFB	91	81.218	ENSMICG00000046795	-	98	89.362	Microcebus_murinus
ENSCHIG00000007262	SAFB	100	79.872	ENSMOCG00000014040	Safb	100	79.872	Microtus_ochrogaster
ENSCHIG00000007262	SAFB	60	49.242	ENSMMOG00000020366	-	65	51.200	Mola_mola
ENSCHIG00000007262	SAFB	98	76.744	ENSMODG00000001236	SAFB	98	72.410	Monodelphis_domestica
ENSCHIG00000007262	SAFB	93	41.918	ENSMALG00000020330	safb	98	44.332	Monopterus_albus
ENSCHIG00000007262	SAFB	100	79.787	MGP_CAROLIEiJ_G0021780	Safb	100	79.787	Mus_caroli
ENSCHIG00000007262	SAFB	100	79.787	ENSMUSG00000071054	Safb	100	79.787	Mus_musculus
ENSCHIG00000007262	SAFB	98	82.547	MGP_PahariEiJ_G0020769	Safb	100	79.702	Mus_pahari
ENSCHIG00000007262	SAFB	98	91.981	ENSMPUG00000006123	SAFB	94	88.671	Mustela_putorius_furo
ENSCHIG00000007262	SAFB	98	91.981	ENSMLUG00000001081	SAFB	100	88.453	Myotis_lucifugus
ENSCHIG00000007262	SAFB	100	78.762	ENSNGAG00000019882	Safb	100	78.442	Nannospalax_galili
ENSCHIG00000007262	SAFB	98	91.981	ENSNLEG00000013551	SAFB	100	88.510	Nomascus_leucogenys
ENSCHIG00000007262	SAFB	89	79.853	ENSOPRG00000011561	-	100	81.327	Ochotona_princeps
ENSCHIG00000007262	SAFB	98	91.038	ENSODEG00000014838	SAFB	100	84.845	Octodon_degus
ENSCHIG00000007262	SAFB	94	41.574	ENSONIG00000002318	safb	95	43.870	Oreochromis_niloticus
ENSCHIG00000007262	SAFB	90	77.163	ENSOCUG00000014628	SAFB	100	75.837	Oryctolagus_cuniculus
ENSCHIG00000007262	SAFB	91	43.089	ENSORLG00000016989	safb	98	42.549	Oryzias_latipes
ENSCHIG00000007262	SAFB	95	41.647	ENSORLG00020000404	safb	60	47.004	Oryzias_latipes_hni
ENSCHIG00000007262	SAFB	95	42.603	ENSORLG00015010733	safb	60	49.472	Oryzias_latipes_hsok
ENSCHIG00000007262	SAFB	94	39.537	ENSOMEG00000009066	safb	59	48.763	Oryzias_melastigma
ENSCHIG00000007262	SAFB	98	88.208	ENSOGAG00000027769	SAFB	100	85.512	Otolemur_garnettii
ENSCHIG00000007262	SAFB	98	98.585	ENSOARG00000007662	-	100	94.137	Ovis_aries
ENSCHIG00000007262	SAFB	79	91.011	ENSOARG00000007856	-	100	90.616	Ovis_aries
ENSCHIG00000007262	SAFB	98	92.453	ENSPPAG00000035129	SAFB	100	87.255	Pan_paniscus
ENSCHIG00000007262	SAFB	98	91.509	ENSPPRG00000017197	SAFB	100	89.434	Panthera_pardus
ENSCHIG00000007262	SAFB	98	92.453	ENSPTRG00000010335	SAFB	100	87.255	Pan_troglodytes
ENSCHIG00000007262	SAFB	98	91.981	ENSPANG00000007770	SAFB	100	87.582	Papio_anubis
ENSCHIG00000007262	SAFB	91	42.630	ENSPKIG00000009902	safb	98	44.879	Paramormyrops_kingsleyae
ENSCHIG00000007262	SAFB	100	60.737	ENSPSIG00000011679	-	100	62.458	Pelodiscus_sinensis
ENSCHIG00000007262	SAFB	98	64.789	ENSPSIG00000009367	-	97	61.589	Pelodiscus_sinensis
ENSCHIG00000007262	SAFB	100	80.790	ENSPEMG00000020428	Safb	100	80.790	Peromyscus_maniculatus_bairdii
ENSCHIG00000007262	SAFB	58	75.461	ENSPCIG00000009504	-	99	77.355	Phascolarctos_cinereus
ENSCHIG00000007262	SAFB	95	38.864	ENSPFOG00000007745	safb	99	42.638	Poecilia_formosa
ENSCHIG00000007262	SAFB	95	38.312	ENSPLAG00000001614	safb	98	40.924	Poecilia_latipinna
ENSCHIG00000007262	SAFB	95	38.636	ENSPMEG00000021023	safb	98	41.724	Poecilia_mexicana
ENSCHIG00000007262	SAFB	95	38.462	ENSPREG00000012496	safb	98	40.642	Poecilia_reticulata
ENSCHIG00000007262	SAFB	98	92.453	ENSPPYG00000009428	SAFB	100	87.459	Pongo_abelii
ENSCHIG00000007262	SAFB	98	91.038	ENSPCAG00000006475	SAFB	100	80.932	Procavia_capensis
ENSCHIG00000007262	SAFB	100	81.453	ENSPCOG00000014090	SAFB	100	79.545	Propithecus_coquereli
ENSCHIG00000007262	SAFB	100	81.066	ENSPVAG00000004913	SAFB	100	81.502	Pteropus_vampyrus
ENSCHIG00000007262	SAFB	95	42.632	ENSPNAG00000021838	safb	98	45.158	Pygocentrus_nattereri
ENSCHIG00000007262	SAFB	98	81.132	ENSRNOG00000050543	Safb	100	79.745	Rattus_norvegicus
ENSCHIG00000007262	SAFB	100	88.426	ENSRBIG00000042509	SAFB	100	79.433	Rhinopithecus_bieti
ENSCHIG00000007262	SAFB	98	92.453	ENSRROG00000029278	SAFB	100	87.800	Rhinopithecus_roxellana
ENSCHIG00000007262	SAFB	98	92.453	ENSSBOG00000026291	SAFB	100	88.222	Saimiri_boliviensis_boliviensis
ENSCHIG00000007262	SAFB	96	43.370	ENSSFOG00015008156	safb	98	44.865	Scleropages_formosus
ENSCHIG00000007262	SAFB	93	41.096	ENSSMAG00000009316	safb	98	42.889	Scophthalmus_maximus
ENSCHIG00000007262	SAFB	95	40.632	ENSSDUG00000009652	safb	97	41.991	Seriola_dumerili
ENSCHIG00000007262	SAFB	95	43.237	ENSSLDG00000001670	safb	95	43.561	Seriola_lalandi_dorsalis
ENSCHIG00000007262	SAFB	93	80.819	ENSSARG00000010475	SAFB	100	81.520	Sorex_araneus
ENSCHIG00000007262	SAFB	55	61.983	ENSSPUG00000009747	-	99	58.365	Sphenodon_punctatus
ENSCHIG00000007262	SAFB	53	55.233	ENSSPUG00000009820	-	99	60.848	Sphenodon_punctatus
ENSCHIG00000007262	SAFB	94	40.438	ENSSPAG00000015682	safb	97	39.954	Stegastes_partitus
ENSCHIG00000007262	SAFB	98	91.509	ENSSSCG00000013522	SAFB	99	91.517	Sus_scrofa
ENSCHIG00000007262	SAFB	97	64.077	ENSTGUG00000000502	-	97	64.849	Taeniopygia_guttata
ENSCHIG00000007262	SAFB	94	63.592	ENSTGUG00000000489	-	97	64.906	Taeniopygia_guttata
ENSCHIG00000007262	SAFB	93	40.852	ENSTRUG00000003567	safb	95	43.148	Takifugu_rubripes
ENSCHIG00000007262	SAFB	89	43.952	ENSTNIG00000015470	safb	100	42.991	Tetraodon_nigroviridis
ENSCHIG00000007262	SAFB	94	73.399	ENSTBEG00000013124	-	66	90.769	Tupaia_belangeri
ENSCHIG00000007262	SAFB	92	92.063	ENSTTRG00000013588	SAFB	92	92.063	Tursiops_truncatus
ENSCHIG00000007262	SAFB	78	90.541	ENSUAMG00000024543	SAFB	100	90.541	Ursus_americanus
ENSCHIG00000007262	SAFB	95	91.707	ENSUMAG00000009734	SAFB	95	93.092	Ursus_maritimus
ENSCHIG00000007262	SAFB	72	89.565	ENSVPAG00000012043	SAFB	78	89.489	Vicugna_pacos
ENSCHIG00000007262	SAFB	98	92.925	ENSVVUG00000013720	SAFB	87	89.869	Vulpes_vulpes
ENSCHIG00000007262	SAFB	94	43.627	ENSXETG00000008755	safb	97	53.828	Xenopus_tropicalis
ENSCHIG00000007262	SAFB	96	38.376	ENSXMAG00000003458	safb	92	42.180	Xiphophorus_maculatus