EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000007847 (Gene tree)
Gene ID: 102170283
Gene Symbol: VARS2
Alias: DKFZP434L1435|G7a|KIAA1885|VARS2L|VARSL
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 11654 bases
Position: chr23:21834486-21846139
Accession: 102170283
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000003753	tRNA-synt_1g	PF09334.11	5.8e-14	1	1
ENSCHIP00000003753	Anticodon_1	PF08264.13	1.1e-30	1	1
ENSCHIP00000003753	tRNA-synt_1	PF00133.22	2.3e-180	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000010915	VARS2-201	3198	XM_005696633	ENSCHIP00000003753	1065 (aa)	XP_005696690	UPI000847A978

Gene Model

Click here to download ENSCHIG00000007847's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000007847's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000007847	VARS2	91	52.362	ENSCHIG00000011008	VARS	81	51.013

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000007847	VARS2	93	51.562	ENSAPOG00000007396	vars2	99	50.511	Acanthochromis_polyacanthus
ENSCHIG00000007847	VARS2	99	87.736	ENSAMEG00000012997	VARS2	97	87.951	Ailuropoda_melanoleuca
ENSCHIG00000007847	VARS2	98	51.601	ENSACIG00000004344	vars2	97	51.653	Amphilophus_citrinellus
ENSCHIG00000007847	VARS2	94	51.610	ENSAOCG00000000476	vars2	99	50.093	Amphiprion_ocellaris
ENSCHIG00000007847	VARS2	93	51.267	ENSAPEG00000008646	vars2	96	50.000	Amphiprion_percula
ENSCHIG00000007847	VARS2	91	53.575	ENSATEG00000012291	vars2	96	52.363	Anabas_testudineus
ENSCHIG00000007847	VARS2	97	59.104	ENSACAG00000022093	VARS2	97	59.104	Anolis_carolinensis
ENSCHIG00000007847	VARS2	99	87.453	ENSANAG00000038018	VARS2	99	87.666	Aotus_nancymaae
ENSCHIG00000007847	VARS2	98	50.979	ENSACLG00000018673	vars2	99	50.604	Astatotilapia_calliptera
ENSCHIG00000007847	VARS2	95	52.385	ENSAMXG00000017773	vars2	98	51.673	Astyanax_mexicanus
ENSCHIG00000007847	VARS2	100	97.559	ENSBTAG00000010698	VARS2	100	97.559	Bos_taurus
ENSCHIG00000007847	VARS2	99	87.830	ENSCJAG00000019826	VARS2	99	88.140	Callithrix_jacchus
ENSCHIG00000007847	VARS2	99	86.686	ENSCAFG00000000454	VARS2	99	86.730	Canis_familiaris
ENSCHIG00000007847	VARS2	87	87.257	ENSCAFG00020019387	VARS2	95	87.298	Canis_lupus_dingo
ENSCHIG00000007847	VARS2	99	87.453	ENSTSYG00000009904	VARS2	99	87.666	Carlito_syrichta
ENSCHIG00000007847	VARS2	88	85.209	ENSCAPG00000017770	VARS2	99	85.221	Cavia_aperea
ENSCHIG00000007847	VARS2	99	84.492	ENSCPOG00000021834	VARS2	99	84.499	Cavia_porcellus
ENSCHIG00000007847	VARS2	99	88.113	ENSCCAG00000037907	VARS2	99	88.330	Cebus_capucinus
ENSCHIG00000007847	VARS2	99	89.245	ENSCATG00000032554	VARS2	99	89.469	Cercocebus_atys
ENSCHIG00000007847	VARS2	99	84.920	ENSCLAG00000002889	VARS2	99	84.929	Chinchilla_lanigera
ENSCHIG00000007847	VARS2	99	88.962	ENSCSAG00000008327	VARS2	99	89.184	Chlorocebus_sabaeus
ENSCHIG00000007847	VARS2	91	62.769	ENSCPBG00000021502	VARS2	96	63.440	Chrysemys_picta_bellii
ENSCHIG00000007847	VARS2	99	89.340	ENSCANG00000014991	VARS2	98	89.564	Colobus_angolensis_palliatus
ENSCHIG00000007847	VARS2	98	83.254	ENSCGRG00001021535	Vars2	99	83.302	Cricetulus_griseus_chok1gshd
ENSCHIG00000007847	VARS2	98	83.254	ENSCGRG00000014112	Vars2	99	83.302	Cricetulus_griseus_crigri
ENSCHIG00000007847	VARS2	82	56.659	ENSCSEG00000015432	vars2	84	68.000	Cynoglossus_semilaevis
ENSCHIG00000007847	VARS2	63	53.166	ENSCVAG00000017765	vars2	94	53.166	Cyprinodon_variegatus
ENSCHIG00000007847	VARS2	98	50.988	ENSDARG00000056717	vars2	99	50.894	Danio_rerio
ENSCHIG00000007847	VARS2	78	86.396	ENSDORG00000008516	Vars2	93	86.555	Dipodomys_ordii
ENSCHIG00000007847	VARS2	99	76.909	ENSETEG00000014844	VARS2	99	77.040	Echinops_telfairi
ENSCHIG00000007847	VARS2	99	91.124	ENSEASG00005019997	VARS2	99	88.626	Equus_asinus_asinus
ENSCHIG00000007847	VARS2	99	92.162	ENSECAG00000018202	VARS2	99	92.133	Equus_caballus
ENSCHIG00000007847	VARS2	69	83.495	ENSEEUG00000012591	-	68	83.495	Erinaceus_europaeus
ENSCHIG00000007847	VARS2	93	52.031	ENSELUG00000017824	vars2	97	51.643	Esox_lucius
ENSCHIG00000007847	VARS2	99	88.385	ENSFCAG00000010531	VARS2	99	88.436	Felis_catus
ENSCHIG00000007847	VARS2	99	85.066	ENSFDAG00000017216	VARS2	99	85.038	Fukomys_damarensis
ENSCHIG00000007847	VARS2	84	52.902	ENSFHEG00000013932	vars2	93	51.480	Fundulus_heteroclitus
ENSCHIG00000007847	VARS2	88	56.034	ENSGMOG00000018960	vars2	99	56.034	Gadus_morhua
ENSCHIG00000007847	VARS2	85	48.749	ENSGAFG00000004737	vars2	89	50.251	Gambusia_affinis
ENSCHIG00000007847	VARS2	92	54.462	ENSGACG00000001464	vars2	99	54.462	Gasterosteus_aculeatus
ENSCHIG00000007847	VARS2	91	62.677	ENSGAGG00000011652	VARS2	98	63.196	Gopherus_agassizii
ENSCHIG00000007847	VARS2	99	89.245	ENSGGOG00000014587	VARS2	99	89.469	Gorilla_gorilla
ENSCHIG00000007847	VARS2	90	52.280	ENSHBUG00000002448	vars2	93	52.337	Haplochromis_burtoni
ENSCHIG00000007847	VARS2	99	82.941	ENSHGLG00000012886	VARS2	96	83.033	Heterocephalus_glaber_female
ENSCHIG00000007847	VARS2	99	82.846	ENSHGLG00100016535	VARS2	99	82.938	Heterocephalus_glaber_male
ENSCHIG00000007847	VARS2	69	49.535	ENSHCOG00000017907	vars2	94	51.408	Hippocampus_comes
ENSCHIG00000007847	VARS2	91	54.427	ENSIPUG00000015573	Vars2	98	52.528	Ictalurus_punctatus
ENSCHIG00000007847	VARS2	99	87.947	ENSSTOG00000009924	VARS2	99	88.140	Ictidomys_tridecemlineatus
ENSCHIG00000007847	VARS2	99	83.160	ENSJJAG00000011144	Vars2	99	83.302	Jaculus_jaculus
ENSCHIG00000007847	VARS2	94	51.591	ENSKMAG00000001393	vars2	96	51.238	Kryptolebias_marmoratus
ENSCHIG00000007847	VARS2	94	51.451	ENSLBEG00000011949	vars2	96	51.048	Labrus_bergylta
ENSCHIG00000007847	VARS2	52	63.063	ENSLBEG00000005480	-	81	63.043	Labrus_bergylta
ENSCHIG00000007847	VARS2	95	51.873	ENSLACG00000001576	-	99	52.119	Latimeria_chalumnae
ENSCHIG00000007847	VARS2	99	87.689	ENSLAFG00000015183	VARS2	99	87.761	Loxodonta_africana
ENSCHIG00000007847	VARS2	99	88.679	ENSMFAG00000042367	VARS2	99	88.899	Macaca_fascicularis
ENSCHIG00000007847	VARS2	99	88.774	ENSMMUG00000018609	VARS2	99	88.994	Macaca_mulatta
ENSCHIG00000007847	VARS2	99	89.151	ENSMNEG00000043163	VARS2	99	89.374	Macaca_nemestrina
ENSCHIG00000007847	VARS2	99	89.340	ENSMLEG00000041728	VARS2	96	89.564	Mandrillus_leucophaeus
ENSCHIG00000007847	VARS2	95	51.437	ENSMAMG00000020339	vars2	97	50.800	Mastacembelus_armatus
ENSCHIG00000007847	VARS2	98	50.885	ENSMZEG00005017669	vars2	99	50.511	Maylandia_zebra
ENSCHIG00000007847	VARS2	99	83.664	ENSMAUG00000018946	Vars2	99	83.791	Mesocricetus_auratus
ENSCHIG00000007847	VARS2	84	88.453	ENSMICG00000005365	VARS2	100	88.453	Microcebus_murinus
ENSCHIG00000007847	VARS2	93	86.545	ENSMOCG00000014607	Vars2	99	86.545	Microtus_ochrogaster
ENSCHIG00000007847	VARS2	91	52.679	ENSMMOG00000012122	vars2	97	51.003	Mola_mola
ENSCHIG00000007847	VARS2	99	74.647	ENSMODG00000015848	VARS2	98	74.693	Monodelphis_domestica
ENSCHIG00000007847	VARS2	92	52.495	ENSMALG00000009217	vars2	97	52.610	Monopterus_albus
ENSCHIG00000007847	VARS2	99	84.499	MGP_CAROLIEiJ_G0021529	Vars2	99	84.630	Mus_caroli
ENSCHIG00000007847	VARS2	99	84.594	ENSMUSG00000038838	Vars2	99	84.725	Mus_musculus
ENSCHIG00000007847	VARS2	99	85.066	MGP_PahariEiJ_G0020523	Vars2	99	85.199	Mus_pahari
ENSCHIG00000007847	VARS2	99	84.310	MGP_SPRETEiJ_G0022436	Vars2	99	84.440	Mus_spretus
ENSCHIG00000007847	VARS2	99	88.208	ENSMPUG00000011643	VARS2	99	88.341	Mustela_putorius_furo
ENSCHIG00000007847	VARS2	99	86.155	ENSMLUG00000002356	VARS2	96	86.265	Myotis_lucifugus
ENSCHIG00000007847	VARS2	98	77.693	ENSNGAG00000020607	Vars2	99	77.526	Nannospalax_galili
ENSCHIG00000007847	VARS2	61	51.240	ENSNBRG00000001624	vars2	58	53.444	Neolamprologus_brichardi
ENSCHIG00000007847	VARS2	99	85.566	ENSNLEG00000005625	VARS2	97	85.769	Nomascus_leucogenys
ENSCHIG00000007847	VARS2	78	73.167	ENSMEUG00000014475	VARS2	90	73.167	Notamacropus_eugenii
ENSCHIG00000007847	VARS2	89	83.628	ENSOPRG00000000682	VARS2	89	83.628	Ochotona_princeps
ENSCHIG00000007847	VARS2	99	82.736	ENSODEG00000017965	VARS2	99	82.860	Octodon_degus
ENSCHIG00000007847	VARS2	92	38.610	ENSONIG00000004734	vars2	98	38.588	Oreochromis_niloticus
ENSCHIG00000007847	VARS2	82	61.910	ENSOANG00000000398	-	99	61.850	Ornithorhynchus_anatinus
ENSCHIG00000007847	VARS2	99	80.186	ENSOCUG00000021496	VARS2	64	80.410	Oryctolagus_cuniculus
ENSCHIG00000007847	VARS2	92	52.731	ENSORLG00000010632	vars2	94	51.675	Oryzias_latipes
ENSCHIG00000007847	VARS2	93	51.996	ENSORLG00020018584	vars2	97	51.272	Oryzias_latipes_hni
ENSCHIG00000007847	VARS2	94	51.503	ENSORLG00015010408	vars2	96	50.902	Oryzias_latipes_hsok
ENSCHIG00000007847	VARS2	91	53.561	ENSOMEG00000008360	vars2	97	51.789	Oryzias_melastigma
ENSCHIG00000007847	VARS2	99	87.124	ENSOGAG00000006087	VARS2	96	87.311	Otolemur_garnettii
ENSCHIG00000007847	VARS2	100	96.998	ENSOARG00000010844	VARS2	99	96.998	Ovis_aries
ENSCHIG00000007847	VARS2	99	89.151	ENSPPAG00000041141	VARS2	99	89.374	Pan_paniscus
ENSCHIG00000007847	VARS2	99	87.913	ENSPPRG00000006751	VARS2	97	88.057	Panthera_pardus
ENSCHIG00000007847	VARS2	99	87.819	ENSPTIG00000017799	VARS2	97	89.170	Panthera_tigris_altaica
ENSCHIG00000007847	VARS2	99	89.151	ENSPTRG00000034497	VARS2	99	89.374	Pan_troglodytes
ENSCHIG00000007847	VARS2	99	89.340	ENSPANG00000018481	VARS2	100	89.255	Papio_anubis
ENSCHIG00000007847	VARS2	94	54.403	ENSPKIG00000011372	vars2	96	54.203	Paramormyrops_kingsleyae
ENSCHIG00000007847	VARS2	59	67.670	ENSPSIG00000006206	VARS2	92	67.130	Pelodiscus_sinensis
ENSCHIG00000007847	VARS2	96	52.691	ENSPMGG00000000465	vars2	98	52.691	Periophthalmus_magnuspinnatus
ENSCHIG00000007847	VARS2	99	84.166	ENSPEMG00000014691	Vars2	99	84.535	Peromyscus_maniculatus_bairdii
ENSCHIG00000007847	VARS2	99	76.087	ENSPCIG00000015040	VARS2	99	76.209	Phascolarctos_cinereus
ENSCHIG00000007847	VARS2	92	52.574	ENSPFOG00000017616	vars2	95	51.946	Poecilia_formosa
ENSCHIG00000007847	VARS2	92	52.122	ENSPLAG00000019778	vars2	96	51.503	Poecilia_latipinna
ENSCHIG00000007847	VARS2	92	52.221	ENSPMEG00000011123	vars2	95	51.600	Poecilia_mexicana
ENSCHIG00000007847	VARS2	89	47.551	ENSPREG00000014998	vars2	94	47.006	Poecilia_reticulata
ENSCHIG00000007847	VARS2	99	89.057	ENSPPYG00000016424	VARS2	99	89.374	Pongo_abelii
ENSCHIG00000007847	VARS2	84	83.200	ENSPCAG00000006946	VARS2	83	83.951	Procavia_capensis
ENSCHIG00000007847	VARS2	99	87.523	ENSPCOG00000014839	VARS2	97	87.713	Propithecus_coquereli
ENSCHIG00000007847	VARS2	99	88.407	ENSPVAG00000004197	VARS2	99	88.710	Pteropus_vampyrus
ENSCHIG00000007847	VARS2	83	60.753	ENSPNYG00000010314	vars2	98	60.753	Pundamilia_nyererei
ENSCHIG00000007847	VARS2	94	53.861	ENSPNAG00000026793	vars2	94	53.861	Pygocentrus_nattereri
ENSCHIG00000007847	VARS2	99	83.648	ENSRNOG00000000833	Vars2	99	83.871	Rattus_norvegicus
ENSCHIG00000007847	VARS2	99	89.245	ENSRBIG00000032725	VARS2	99	89.469	Rhinopithecus_bieti
ENSCHIG00000007847	VARS2	99	89.057	ENSRROG00000043847	VARS2	99	89.279	Rhinopithecus_roxellana
ENSCHIG00000007847	VARS2	99	85.767	ENSSBOG00000033240	VARS2	97	85.967	Saimiri_boliviensis_boliviensis
ENSCHIG00000007847	VARS2	99	75.898	ENSSHAG00000009307	VARS2	99	76.019	Sarcophilus_harrisii
ENSCHIG00000007847	VARS2	96	52.476	ENSSFOG00015016187	vars2	98	51.914	Scleropages_formosus
ENSCHIG00000007847	VARS2	92	53.194	ENSSMAG00000020842	vars2	98	51.894	Scophthalmus_maximus
ENSCHIG00000007847	VARS2	93	52.446	ENSSDUG00000011598	vars2	97	51.754	Seriola_dumerili
ENSCHIG00000007847	VARS2	91	53.279	ENSSLDG00000015492	vars2	95	51.344	Seriola_lalandi_dorsalis
ENSCHIG00000007847	VARS2	57	92.701	ENSSARG00000003786	-	69	92.701	Sorex_araneus
ENSCHIG00000007847	VARS2	88	59.703	ENSSPUG00000014700	VARS2	94	60.021	Sphenodon_punctatus
ENSCHIG00000007847	VARS2	93	50.199	ENSSPAG00000004654	vars2	96	48.864	Stegastes_partitus
ENSCHIG00000007847	VARS2	99	92.170	ENSSSCG00000001384	VARS2	99	92.133	Sus_scrofa
ENSCHIG00000007847	VARS2	94	52.830	ENSTRUG00000005264	vars2	98	51.671	Takifugu_rubripes
ENSCHIG00000007847	VARS2	99	51.493	ENSTNIG00000005916	vars2	99	51.859	Tetraodon_nigroviridis
ENSCHIG00000007847	VARS2	52	92.537	ENSTBEG00000007976	-	52	92.537	Tupaia_belangeri
ENSCHIG00000007847	VARS2	93	93.274	ENSTTRG00000012243	VARS2	93	93.274	Tursiops_truncatus
ENSCHIG00000007847	VARS2	99	87.276	ENSUAMG00000026124	VARS2	99	88.950	Ursus_americanus
ENSCHIG00000007847	VARS2	99	88.019	ENSUMAG00000019894	VARS2	99	88.140	Ursus_maritimus
ENSCHIG00000007847	VARS2	99	87.063	ENSVVUG00000010754	VARS2	94	87.109	Vulpes_vulpes
ENSCHIG00000007847	VARS2	89	54.621	ENSXETG00000003036	vars2	99	54.621	Xenopus_tropicalis
ENSCHIG00000007847	VARS2	89	53.782	ENSXCOG00000003455	vars2	97	51.701	Xiphophorus_couchianus
ENSCHIG00000007847	VARS2	92	52.320	ENSXMAG00000013523	vars2	98	50.139	Xiphophorus_maculatus