EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000008208 (Gene tree)
Gene ID: 102177923
Gene Symbol: ARL5C
Alias: ARL12
Full Name: ADP ribosylation factor like GTPase 5C
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 5804 bases
Position: chr19:39308425-39314228
Accession: 102177923
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000004007	MMR_HSR1	PF01926.23	1.3e-06	1	1
ENSCHIP00000004001	MMR_HSR1	PF01926.23	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000011325	ARL5C-201	540	XM_005693735	ENSCHIP00000004001	179 (aa)	XP_005693792	UPI0003AF5D42
ENSCHIT00000011336	ARL5C-202	531	-	ENSCHIP00000004007	176 (aa)	-	UPI000D18F0DE

Gene Model

Click here to download ENSCHIG00000008208's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000008208's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000008208	ARL5C	90	38.125	ENSCHIG00000006468	ARL14	83	38.125
ENSCHIG00000008208	ARL5C	100	45.556	ENSCHIG00000019252	-	99	45.556
ENSCHIG00000008208	ARL5C	98	46.591	ENSCHIG00000027099	-	97	46.591
ENSCHIG00000008208	ARL5C	98	46.591	ENSCHIG00000010924	ARF1	97	46.591
ENSCHIG00000008208	ARL5C	98	72.571	ENSCHIG00000025329	ARL5A	98	72.571
ENSCHIG00000008208	ARL5C	88	34.375	ENSCHIG00000005944	ARL4D	80	34.375
ENSCHIG00000008208	ARL5C	91	48.765	ENSCHIG00000024524	ARL1	95	48.765
ENSCHIG00000008208	ARL5C	98	77.143	ENSCHIG00000026796	ARL5B	97	77.143
ENSCHIG00000008208	ARL5C	100	43.333	ENSCHIG00000017997	-	100	43.333
ENSCHIG00000008208	ARL5C	93	41.566	ENSCHIG00000012000	ARL3	91	41.566
ENSCHIG00000008208	ARL5C	94	36.932	ENSCHIG00000010007	ARFRP1	88	36.932
ENSCHIG00000008208	ARL5C	100	43.333	ENSCHIG00000005883	-	100	43.333
ENSCHIG00000008208	ARL5C	93	40.964	ENSCHIG00000021231	ARL2-SNX15	90	40.964
ENSCHIG00000008208	ARL5C	100	43.889	ENSCHIG00000018906	ARF5	100	43.889
ENSCHIG00000008208	ARL5C	86	40.506	ENSCHIG00000011984	ARL4A	79	40.506
ENSCHIG00000008208	ARL5C	86	42.767	ENSCHIG00000008457	ARL4C	82	42.767
ENSCHIG00000008208	ARL5C	98	39.779	ENSCHIG00000017792	ARL6	98	39.779

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000008208	ARL5C	100	85.475	ENSAMEG00000004195	ARL5C	99	85.475	Ailuropoda_melanoleuca
ENSCHIG00000008208	ARL5C	100	81.006	ENSACAG00000003879	-	100	81.006	Anolis_carolinensis
ENSCHIG00000008208	ARL5C	100	90.503	ENSCAFG00000016525	ARL5C	100	90.503	Canis_familiaris
ENSCHIG00000008208	ARL5C	60	91.509	ENSCHOG00000013232	-	100	91.509	Choloepus_hoffmanni
ENSCHIG00000008208	ARL5C	99	80.226	ENSCGRG00001000695	Arl5c	99	80.226	Cricetulus_griseus_chok1gshd
ENSCHIG00000008208	ARL5C	99	80.791	ENSCGRG00000007376	Arl5c	99	80.791	Cricetulus_griseus_crigri
ENSCHIG00000008208	ARL5C	99	89.888	ENSDNOG00000019741	ARL5C	99	89.888	Dasypus_novemcinctus
ENSCHIG00000008208	ARL5C	100	87.709	ENSDORG00000016304	Arl5c	100	87.709	Dipodomys_ordii
ENSCHIG00000008208	ARL5C	93	90.854	ENSEASG00005001922	ARL5C	76	91.463	Equus_asinus_asinus
ENSCHIG00000008208	ARL5C	100	90.503	ENSECAG00000009024	ARL5C	100	90.503	Equus_caballus
ENSCHIG00000008208	ARL5C	100	91.061	ENSFCAG00000009962	ARL5C	100	91.061	Felis_catus
ENSCHIG00000008208	ARL5C	100	91.620	ENSSTOG00000011104	ARL5C	100	91.620	Ictidomys_tridecemlineatus
ENSCHIG00000008208	ARL5C	99	78.090	ENSLACG00000015332	ARL5C	99	78.090	Latimeria_chalumnae
ENSCHIG00000008208	ARL5C	100	89.944	ENSLAFG00000018248	ARL5C	99	89.944	Loxodonta_africana
ENSCHIG00000008208	ARL5C	99	76.271	ENSMAUG00000012845	Arl5c	87	76.271	Mesocricetus_auratus
ENSCHIG00000008208	ARL5C	100	89.385	ENSMICG00000002661	ARL5C	100	89.385	Microcebus_murinus
ENSCHIG00000008208	ARL5C	99	77.401	ENSMOCG00000000234	Arl5c	99	77.401	Microtus_ochrogaster
ENSCHIG00000008208	ARL5C	100	88.268	MGP_CAROLIEiJ_G0017071	Arl5c	100	88.268	Mus_caroli
ENSCHIG00000008208	ARL5C	100	87.709	ENSMUSG00000038352	Arl5c	100	87.709	Mus_musculus
ENSCHIG00000008208	ARL5C	99	89.266	MGP_PahariEiJ_G0018200	Arl5c	99	89.266	Mus_pahari
ENSCHIG00000008208	ARL5C	100	88.268	MGP_SPRETEiJ_G0017917	Arl5c	100	88.268	Mus_spretus
ENSCHIG00000008208	ARL5C	100	89.944	ENSMLUG00000030149	ARL5C	99	89.944	Myotis_lucifugus
ENSCHIG00000008208	ARL5C	100	86.592	ENSOGAG00000005894	ARL5C	100	86.592	Otolemur_garnettii
ENSCHIG00000008208	ARL5C	100	99.441	ENSOARG00000010377	ARL5C	99	99.441	Ovis_aries
ENSCHIG00000008208	ARL5C	100	91.061	ENSPPRG00000000975	ARL5C	100	91.061	Panthera_pardus
ENSCHIG00000008208	ARL5C	100	89.944	ENSPTIG00000017487	ARL5C	100	89.944	Panthera_tigris_altaica
ENSCHIG00000008208	ARL5C	100	87.709	ENSPEMG00000008932	Arl5c	100	87.709	Peromyscus_maniculatus_bairdii
ENSCHIG00000008208	ARL5C	100	90.503	ENSPCOG00000028489	ARL5C	100	90.503	Propithecus_coquereli
ENSCHIG00000008208	ARL5C	94	89.881	ENSPVAG00000008495	ARL5C	99	89.881	Pteropus_vampyrus
ENSCHIG00000008208	ARL5C	99	86.441	ENSRNOG00000036880	Arl5c	99	86.441	Rattus_norvegicus
ENSCHIG00000008208	ARL5C	98	76.136	ENSSBOG00000021022	ARL5C	100	76.136	Saimiri_boliviensis_boliviensis
ENSCHIG00000008208	ARL5C	96	80.117	ENSSPUG00000007555	ARL5C	100	82.209	Sphenodon_punctatus
ENSCHIG00000008208	ARL5C	99	89.326	ENSTBEG00000007274	ARL5C	99	89.326	Tupaia_belangeri
ENSCHIG00000008208	ARL5C	100	88.268	ENSUAMG00000012299	ARL5C	100	88.268	Ursus_americanus
ENSCHIG00000008208	ARL5C	100	88.827	ENSUMAG00000017197	ARL5C	100	88.827	Ursus_maritimus
ENSCHIG00000008208	ARL5C	100	76.536	ENSXETG00000023713	arl5c	92	76.536	Xenopus_tropicalis