EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000008382 (Gene tree)
Gene ID: 102183993
Gene Symbol: SBNO1
Alias: FLJ10701|FLJ10833|MOP3|Sno
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 41984 bases
Position: chr17:18925106-18967089
Accession: 102183993
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000004339	ResIII	PF04851.15	8.8e-08	1	1
ENSCHIP00000004328	ResIII	PF04851.15	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000011755	SBNO1-202	3813	-	ENSCHIP00000004339	1270 (aa)	-	UPI000D194647
ENSCHIT00000011742	SBNO1-201	4179	XM_005691365	ENSCHIP00000004328	1392 (aa)	XP_005691422	UPI0003AF84E5

Gene Model

Click here to download ENSCHIG00000008382's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000008382's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000008382	SBNO1	82	57.427	ENSCHIG00000026127	SBNO2	71	67.574

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000008382	SBNO1	99	98.732	ENSG00000139697	SBNO1	99	97.987	Homo_sapiens
ENSCHIG00000008382	SBNO1	84	83.244	ENSAPOG00000003196	sbno1	98	81.357	Acanthochromis_polyacanthus
ENSCHIG00000008382	SBNO1	99	98.065	ENSAMEG00000015151	SBNO1	99	98.065	Ailuropoda_melanoleuca
ENSCHIG00000008382	SBNO1	99	81.961	ENSACIG00000008088	sbno1	95	81.961	Amphilophus_citrinellus
ENSCHIG00000008382	SBNO1	99	82.531	ENSAOCG00000014859	sbno1	94	82.531	Amphiprion_ocellaris
ENSCHIG00000008382	SBNO1	99	82.531	ENSAPEG00000006069	sbno1	94	82.531	Amphiprion_percula
ENSCHIG00000008382	SBNO1	99	84.838	ENSATEG00000006667	sbno1	95	84.838	Anabas_testudineus
ENSCHIG00000008382	SBNO1	97	95.437	ENSAPLG00000015674	SBNO1	99	92.098	Anas_platyrhynchos
ENSCHIG00000008382	SBNO1	98	93.974	ENSACAG00000015441	SBNO1	84	93.153	Anolis_carolinensis
ENSCHIG00000008382	SBNO1	99	98.188	ENSANAG00000029958	-	99	98.188	Aotus_nancymaae
ENSCHIG00000008382	SBNO1	99	74.429	ENSACLG00000024913	sbno1	100	74.377	Astatotilapia_calliptera
ENSCHIG00000008382	SBNO1	99	86.871	ENSAMXG00000019473	sbno1	95	86.871	Astyanax_mexicanus
ENSCHIG00000008382	SBNO1	100	99.785	ENSBTAG00000020505	SBNO1	100	99.785	Bos_taurus
ENSCHIG00000008382	SBNO1	99	98.551	ENSCJAG00000016599	SBNO1	99	97.773	Callithrix_jacchus
ENSCHIG00000008382	SBNO1	99	98.736	ENSCAFG00000007503	SBNO1	99	98.459	Canis_familiaris
ENSCHIG00000008382	SBNO1	99	98.030	ENSCAFG00020015363	SBNO1	99	98.030	Canis_lupus_dingo
ENSCHIG00000008382	SBNO1	99	98.913	ENSTSYG00000012749	SBNO1	99	98.348	Carlito_syrichta
ENSCHIG00000008382	SBNO1	97	98.739	ENSCAPG00000000384	SBNO1	99	98.133	Cavia_aperea
ENSCHIG00000008382	SBNO1	99	98.732	ENSCPOG00000008109	SBNO1	99	98.732	Cavia_porcellus
ENSCHIG00000008382	SBNO1	99	95.095	ENSCCAG00000035316	SBNO1	99	93.396	Cebus_capucinus
ENSCHIG00000008382	SBNO1	99	98.732	ENSCATG00000008239	SBNO1	98	98.732	Cercocebus_atys
ENSCHIG00000008382	SBNO1	99	98.732	ENSCLAG00000008995	SBNO1	99	98.732	Chinchilla_lanigera
ENSCHIG00000008382	SBNO1	83	98.531	ENSCSAG00000002064	SBNO1	99	98.531	Chlorocebus_sabaeus
ENSCHIG00000008382	SBNO1	95	98.537	ENSCHOG00000008814	SBNO1	96	94.803	Choloepus_hoffmanni
ENSCHIG00000008382	SBNO1	98	95.104	ENSCPBG00000025968	SBNO1	99	92.026	Chrysemys_picta_bellii
ENSCHIG00000008382	SBNO1	99	92.462	ENSCANG00000042688	-	99	92.391	Colobus_angolensis_palliatus
ENSCHIG00000008382	SBNO1	100	97.717	ENSCGRG00001017470	Sbno1	100	97.717	Cricetulus_griseus_chok1gshd
ENSCHIG00000008382	SBNO1	100	97.717	ENSCGRG00000004756	Sbno1	100	97.717	Cricetulus_griseus_crigri
ENSCHIG00000008382	SBNO1	99	83.213	ENSCSEG00000011919	sbno1	96	82.353	Cynoglossus_semilaevis
ENSCHIG00000008382	SBNO1	99	83.154	ENSCVAG00000007038	sbno1	95	83.154	Cyprinodon_variegatus
ENSCHIG00000008382	SBNO1	99	86.570	ENSDARG00000099080	sbno1	95	86.570	Danio_rerio
ENSCHIG00000008382	SBNO1	99	97.531	ENSDNOG00000017147	SBNO1	98	98.253	Dasypus_novemcinctus
ENSCHIG00000008382	SBNO1	99	97.683	ENSDORG00000015261	Sbno1	95	97.683	Dipodomys_ordii
ENSCHIG00000008382	SBNO1	92	99.291	ENSETEG00000005620	SBNO1	88	99.291	Echinops_telfairi
ENSCHIG00000008382	SBNO1	72	84.729	ENSEBUG00000013823	sbno1	85	84.729	Eptatretus_burgeri
ENSCHIG00000008382	SBNO1	54	97.222	ENSEASG00005012595	-	93	97.222	Equus_asinus_asinus
ENSCHIG00000008382	SBNO1	99	98.851	ENSECAG00000006127	SBNO1	99	98.888	Equus_caballus
ENSCHIG00000008382	SBNO1	83	97.814	ENSEEUG00000003793	SBNO1	83	97.814	Erinaceus_europaeus
ENSCHIG00000008382	SBNO1	99	86.691	ENSELUG00000002886	sbno1	95	86.691	Esox_lucius
ENSCHIG00000008382	SBNO1	99	98.779	ENSFCAG00000015331	SBNO1	99	98.779	Felis_catus
ENSCHIG00000008382	SBNO1	97	95.437	ENSFALG00000009273	SBNO1	99	92.026	Ficedula_albicollis
ENSCHIG00000008382	SBNO1	100	95.833	ENSFDAG00000014232	SBNO1	100	95.833	Fukomys_damarensis
ENSCHIG00000008382	SBNO1	99	83.333	ENSFHEG00000007360	sbno1	95	83.333	Fundulus_heteroclitus
ENSCHIG00000008382	SBNO1	96	84.587	ENSGMOG00000018229	sbno1	99	78.855	Gadus_morhua
ENSCHIG00000008382	SBNO1	87	96.954	ENSGALG00000003392	SBNO1	99	92.608	Gallus_gallus
ENSCHIG00000008382	SBNO1	99	83.513	ENSGAFG00000003960	sbno1	95	83.513	Gambusia_affinis
ENSCHIG00000008382	SBNO1	96	84.489	ENSGACG00000015633	sbno1	94	84.489	Gasterosteus_aculeatus
ENSCHIG00000008382	SBNO1	98	95.292	ENSGAGG00000001065	SBNO1	99	94.384	Gopherus_agassizii
ENSCHIG00000008382	SBNO1	99	98.732	ENSGGOG00000015000	SBNO1	99	98.188	Gorilla_gorilla
ENSCHIG00000008382	SBNO1	99	68.777	ENSHBUG00000011910	sbno1	100	68.746	Haplochromis_burtoni
ENSCHIG00000008382	SBNO1	99	98.919	ENSHGLG00000014165	-	99	98.913	Heterocephalus_glaber_female
ENSCHIG00000008382	SBNO1	93	84.980	ENSHCOG00000003246	sbno1	95	84.980	Hippocampus_comes
ENSCHIG00000008382	SBNO1	99	86.413	ENSIPUG00000015830	Sbno1	93	89.247	Ictalurus_punctatus
ENSCHIG00000008382	SBNO1	99	98.818	ENSSTOG00000023221	SBNO1	99	99.275	Ictidomys_tridecemlineatus
ENSCHIG00000008382	SBNO1	99	97.629	ENSJJAG00000001741	Sbno1	99	97.629	Jaculus_jaculus
ENSCHIG00000008382	SBNO1	99	83.935	ENSKMAG00000009696	sbno1	96	83.096	Kryptolebias_marmoratus
ENSCHIG00000008382	SBNO1	100	84.821	ENSLBEG00000007623	sbno1	95	85.740	Labrus_bergylta
ENSCHIG00000008382	SBNO1	100	81.442	ENSLACG00000017227	SBNO1	99	90.885	Latimeria_chalumnae
ENSCHIG00000008382	SBNO1	99	88.689	ENSLOCG00000005725	sbno1	95	88.689	Lepisosteus_oculatus
ENSCHIG00000008382	SBNO1	99	97.326	ENSLAFG00000002135	SBNO1	99	97.270	Loxodonta_africana
ENSCHIG00000008382	SBNO1	99	97.773	ENSMFAG00000031429	SBNO1	99	97.773	Macaca_fascicularis
ENSCHIG00000008382	SBNO1	99	97.843	ENSMMUG00000011496	SBNO1	99	97.843	Macaca_mulatta
ENSCHIG00000008382	SBNO1	99	98.732	ENSMLEG00000033260	SBNO1	99	98.732	Mandrillus_leucophaeus
ENSCHIG00000008382	SBNO1	99	84.838	ENSMAMG00000005473	sbno1	95	84.838	Mastacembelus_armatus
ENSCHIG00000008382	SBNO1	97	95.817	ENSMGAG00000003274	SBNO1	99	92.526	Meleagris_gallopavo
ENSCHIG00000008382	SBNO1	52	98.033	ENSMAUG00000004834	-	99	98.033	Mesocricetus_auratus
ENSCHIG00000008382	SBNO1	99	97.198	ENSMICG00000006573	-	99	97.198	Microcebus_murinus
ENSCHIG00000008382	SBNO1	100	97.717	ENSMOCG00000009390	Sbno1	100	97.717	Microtus_ochrogaster
ENSCHIG00000008382	SBNO1	99	83.957	ENSMMOG00000008691	sbno1	94	83.957	Mola_mola
ENSCHIG00000008382	SBNO1	99	94.971	ENSMODG00000012470	SBNO1	98	94.971	Monodelphis_domestica
ENSCHIG00000008382	SBNO1	99	83.333	ENSMALG00000001056	sbno1	100	75.577	Monopterus_albus
ENSCHIG00000008382	SBNO1	99	98.551	MGP_CAROLIEiJ_G0027749	Sbno1	99	98.033	Mus_caroli
ENSCHIG00000008382	SBNO1	99	97.556	ENSMUSG00000038095	Sbno1	99	98.336	Mus_musculus
ENSCHIG00000008382	SBNO1	99	97.628	MGP_PahariEiJ_G0024329	Sbno1	100	97.078	Mus_pahari
ENSCHIG00000008382	SBNO1	99	98.551	MGP_SPRETEiJ_G0028747	Sbno1	99	98.336	Mus_spretus
ENSCHIG00000008382	SBNO1	99	98.563	ENSMPUG00000001658	SBNO1	99	98.563	Mustela_putorius_furo
ENSCHIG00000008382	SBNO1	99	98.132	ENSMLUG00000017159	SBNO1	99	98.132	Myotis_lucifugus
ENSCHIG00000008382	SBNO1	99	97.917	ENSNGAG00000012620	Sbno1	98	99.408	Nannospalax_galili
ENSCHIG00000008382	SBNO1	99	74.518	ENSNBRG00000019189	sbno1	100	74.467	Neolamprologus_brichardi
ENSCHIG00000008382	SBNO1	99	94.959	ENSNLEG00000001502	SBNO1	99	94.177	Nomascus_leucogenys
ENSCHIG00000008382	SBNO1	60	96.774	ENSMEUG00000008768	-	93	88.608	Notamacropus_eugenii
ENSCHIG00000008382	SBNO1	99	97.288	ENSOPRG00000011054	SBNO1	99	94.329	Ochotona_princeps
ENSCHIG00000008382	SBNO1	99	99.099	ENSODEG00000009997	SBNO1	99	98.266	Octodon_degus
ENSCHIG00000008382	SBNO1	99	83.154	ENSONIG00000015348	sbno1	95	83.154	Oreochromis_niloticus
ENSCHIG00000008382	SBNO1	98	96.569	ENSOCUG00000002441	SBNO1	95	96.569	Oryctolagus_cuniculus
ENSCHIG00000008382	SBNO1	99	82.852	ENSORLG00000001593	sbno1	95	82.852	Oryzias_latipes
ENSCHIG00000008382	SBNO1	99	82.852	ENSORLG00020015216	sbno1	95	82.852	Oryzias_latipes_hni
ENSCHIG00000008382	SBNO1	99	83.032	ENSORLG00015002726	sbno1	95	83.032	Oryzias_latipes_hsok
ENSCHIG00000008382	SBNO1	99	83.303	ENSOMEG00000019313	sbno1	99	74.947	Oryzias_melastigma
ENSCHIG00000008382	SBNO1	52	95.310	ENSOGAG00000010781	-	99	95.310	Otolemur_garnettii
ENSCHIG00000008382	SBNO1	100	99.785	ENSOARG00000004404	SBNO1	100	99.785	Ovis_aries
ENSCHIG00000008382	SBNO1	99	98.551	ENSPPAG00000024635	SBNO1	99	98.266	Pan_paniscus
ENSCHIG00000008382	SBNO1	99	98.779	ENSPPRG00000022092	SBNO1	99	98.779	Panthera_pardus
ENSCHIG00000008382	SBNO1	99	98.563	ENSPTIG00000017803	SBNO1	99	98.563	Panthera_tigris_altaica
ENSCHIG00000008382	SBNO1	99	98.732	ENSPTRG00000005597	SBNO1	99	98.345	Pan_troglodytes
ENSCHIG00000008382	SBNO1	99	98.732	ENSPANG00000011640	SBNO1	99	98.732	Papio_anubis
ENSCHIG00000008382	SBNO1	99	86.176	ENSPKIG00000001441	sbno1	95	86.176	Paramormyrops_kingsleyae
ENSCHIG00000008382	SBNO1	98	94.896	ENSPSIG00000009572	-	99	91.124	Pelodiscus_sinensis
ENSCHIG00000008382	SBNO1	91	91.441	ENSPSIG00000009256	-	100	88.103	Pelodiscus_sinensis
ENSCHIG00000008382	SBNO1	100	97.480	ENSPEMG00000016087	Sbno1	100	97.480	Peromyscus_maniculatus_bairdii
ENSCHIG00000008382	SBNO1	99	96.014	ENSPCIG00000010985	SBNO1	99	94.329	Phascolarctos_cinereus
ENSCHIG00000008382	SBNO1	99	83.513	ENSPFOG00000005069	sbno1	95	83.513	Poecilia_formosa
ENSCHIG00000008382	SBNO1	99	83.513	ENSPLAG00000015015	sbno1	95	83.513	Poecilia_latipinna
ENSCHIG00000008382	SBNO1	99	83.513	ENSPMEG00000021212	sbno1	95	83.513	Poecilia_mexicana
ENSCHIG00000008382	SBNO1	99	83.154	ENSPREG00000017746	sbno1	95	83.154	Poecilia_reticulata
ENSCHIG00000008382	SBNO1	99	98.732	ENSPPYG00000005084	SBNO1	99	97.628	Pongo_abelii
ENSCHIG00000008382	SBNO1	89	93.141	ENSPCAG00000008634	SBNO1	88	93.113	Procavia_capensis
ENSCHIG00000008382	SBNO1	99	98.276	ENSPCOG00000024277	SBNO1	99	98.361	Propithecus_coquereli
ENSCHIG00000008382	SBNO1	92	98.807	ENSPVAG00000015304	SBNO1	87	98.807	Pteropus_vampyrus
ENSCHIG00000008382	SBNO1	99	83.154	ENSPNYG00000004291	sbno1	95	83.154	Pundamilia_nyererei
ENSCHIG00000008382	SBNO1	99	87.433	ENSPNAG00000015622	sbno1	95	87.433	Pygocentrus_nattereri
ENSCHIG00000008382	SBNO1	100	97.272	ENSRNOG00000001064	Sbno1	100	97.509	Rattus_norvegicus
ENSCHIG00000008382	SBNO1	99	98.732	ENSRROG00000034230	SBNO1	99	98.732	Rhinopithecus_roxellana
ENSCHIG00000008382	SBNO1	96	92.628	ENSSBOG00000015422	SBNO1	99	92.628	Saimiri_boliviensis_boliviensis
ENSCHIG00000008382	SBNO1	99	86.355	ENSSFOG00015019025	sbno1	95	86.355	Scleropages_formosus
ENSCHIG00000008382	SBNO1	99	83.574	ENSSMAG00000013640	sbno1	95	83.574	Scophthalmus_maximus
ENSCHIG00000008382	SBNO1	99	84.657	ENSSDUG00000023480	sbno1	95	84.657	Seriola_dumerili
ENSCHIG00000008382	SBNO1	99	84.657	ENSSLDG00000007928	sbno1	95	84.657	Seriola_lalandi_dorsalis
ENSCHIG00000008382	SBNO1	91	98.039	ENSSARG00000002594	SBNO1	89	98.865	Sorex_araneus
ENSCHIG00000008382	SBNO1	98	94.307	ENSSPUG00000012640	SBNO1	99	89.009	Sphenodon_punctatus
ENSCHIG00000008382	SBNO1	99	82.975	ENSSPAG00000016244	sbno1	95	82.975	Stegastes_partitus
ENSCHIG00000008382	SBNO1	99	98.923	ENSSSCG00000009776	SBNO1	99	98.778	Sus_scrofa
ENSCHIG00000008382	SBNO1	97	95.627	ENSTGUG00000005380	SBNO1	99	91.954	Taeniopygia_guttata
ENSCHIG00000008382	SBNO1	99	84.783	ENSTRUG00000018490	sbno1	95	84.783	Takifugu_rubripes
ENSCHIG00000008382	SBNO1	56	70.654	ENSTNIG00000013506	sbno1	99	70.720	Tetraodon_nigroviridis
ENSCHIG00000008382	SBNO1	99	98.491	ENSUAMG00000019671	SBNO1	99	98.491	Ursus_americanus
ENSCHIG00000008382	SBNO1	99	98.491	ENSUMAG00000004002	SBNO1	99	98.491	Ursus_maritimus
ENSCHIG00000008382	SBNO1	95	95.556	ENSVPAG00000007024	SBNO1	95	95.556	Vicugna_pacos
ENSCHIG00000008382	SBNO1	99	98.491	ENSVVUG00000027807	SBNO1	99	98.491	Vulpes_vulpes
ENSCHIG00000008382	SBNO1	99	91.281	ENSXETG00000031930	SBNO1	95	91.281	Xenopus_tropicalis
ENSCHIG00000008382	SBNO1	86	85.827	ENSXCOG00000011607	sbno1	90	85.602	Xiphophorus_couchianus
ENSCHIG00000008382	SBNO1	99	83.154	ENSXMAG00000002140	sbno1	95	83.154	Xiphophorus_maculatus