EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000008385 (Gene tree)
Gene ID: 102169904
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 58234 bases
Position: chr1:2237214-2295447
Accession: 102169904
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000004165	RRM_1	PF00076.22	3.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000011540	SCAF4-201	3435	XM_018048224	ENSCHIP00000004165	1144 (aa)	XP_017903713	UPI00084693CF

Gene Model

Click here to download ENSCHIG00000008385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000008385's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000008385	SCAF4	100	91.847	ENSG00000156304	SCAF4	100	91.934	Homo_sapiens
ENSCHIG00000008385	SCAF4	79	51.860	ENSAPOG00000002946	scaf4a	55	57.312	Acanthochromis_polyacanthus
ENSCHIG00000008385	SCAF4	72	93.932	ENSAMEG00000014987	SCAF4	97	93.870	Ailuropoda_melanoleuca
ENSCHIG00000008385	SCAF4	99	75.109	ENSAPLG00000002509	SCAF4	59	82.040	Anas_platyrhynchos
ENSCHIG00000008385	SCAF4	100	63.502	ENSACAG00000002569	SCAF4	52	83.537	Anolis_carolinensis
ENSCHIG00000008385	SCAF4	100	91.594	ENSANAG00000037494	SCAF4	100	91.508	Aotus_nancymaae
ENSCHIG00000008385	SCAF4	93	49.686	ENSAMXG00000008585	scaf4a	60	61.919	Astyanax_mexicanus
ENSCHIG00000008385	SCAF4	100	98.605	ENSBTAG00000018855	SCAF4	100	98.605	Bos_taurus
ENSCHIG00000008385	SCAF4	100	91.436	ENSCJAG00000008993	SCAF4	99	93.445	Callithrix_jacchus
ENSCHIG00000008385	SCAF4	99	93.744	ENSCAFG00000008863	SCAF4	99	93.568	Canis_familiaris
ENSCHIG00000008385	SCAF4	99	92.035	ENSCAFG00020026019	SCAF4	100	92.878	Canis_lupus_dingo
ENSCHIG00000008385	SCAF4	92	92.316	ENSTSYG00000011344	SCAF4	98	92.290	Carlito_syrichta
ENSCHIG00000008385	SCAF4	100	87.759	ENSCPOG00000012443	SCAF4	100	87.565	Cavia_porcellus
ENSCHIG00000008385	SCAF4	100	91.580	ENSCCAG00000033727	SCAF4	100	92.448	Cebus_capucinus
ENSCHIG00000008385	SCAF4	100	90.933	ENSCATG00000030379	SCAF4	100	91.537	Cercocebus_atys
ENSCHIG00000008385	SCAF4	99	89.323	ENSCLAG00000006298	SCAF4	100	88.802	Chinchilla_lanigera
ENSCHIG00000008385	SCAF4	100	91.349	ENSCSAG00000009438	SCAF4	100	91.436	Chlorocebus_sabaeus
ENSCHIG00000008385	SCAF4	100	91.667	ENSCANG00000029847	SCAF4	100	92.188	Colobus_angolensis_palliatus
ENSCHIG00000008385	SCAF4	72	84.946	ENSCGRG00001020821	Scaf4	69	85.305	Cricetulus_griseus_chok1gshd
ENSCHIG00000008385	SCAF4	72	85.096	ENSCGRG00000014360	Scaf4	69	85.457	Cricetulus_griseus_crigri
ENSCHIG00000008385	SCAF4	57	58.423	ENSCSEG00000012808	-	72	58.423	Cynoglossus_semilaevis
ENSCHIG00000008385	SCAF4	79	54.158	ENSDARG00000077093	scaf4a	56	60.606	Danio_rerio
ENSCHIG00000008385	SCAF4	100	89.616	ENSDNOG00000019014	SCAF4	94	89.878	Dasypus_novemcinctus
ENSCHIG00000008385	SCAF4	96	79.710	ENSETEG00000000583	SCAF4	99	79.729	Echinops_telfairi
ENSCHIG00000008385	SCAF4	100	94.159	ENSEASG00005007756	SCAF4	100	94.246	Equus_asinus_asinus
ENSCHIG00000008385	SCAF4	100	94.077	ENSECAG00000014248	SCAF4	100	94.251	Equus_caballus
ENSCHIG00000008385	SCAF4	58	52.921	ENSELUG00000002779	SCAF8	61	68.841	Esox_lucius
ENSCHIG00000008385	SCAF4	100	94.143	ENSFCAG00000002228	SCAF4	100	94.056	Felis_catus
ENSCHIG00000008385	SCAF4	99	87.414	ENSFDAG00000017780	SCAF4	100	87.166	Fukomys_damarensis
ENSCHIG00000008385	SCAF4	100	76.476	ENSGALG00000033965	SCAF4	59	82.576	Gallus_gallus
ENSCHIG00000008385	SCAF4	91	89.193	ENSGGOG00000015557	SCAF4	100	92.133	Gorilla_gorilla
ENSCHIG00000008385	SCAF4	100	89.948	ENSHGLG00000010582	SCAF4	100	90.295	Heterocephalus_glaber_female
ENSCHIG00000008385	SCAF4	99	89.825	ENSHGLG00100009441	SCAF4	100	90.175	Heterocephalus_glaber_male
ENSCHIG00000008385	SCAF4	70	58.270	ENSIPUG00000011285	scaf4	63	62.182	Ictalurus_punctatus
ENSCHIG00000008385	SCAF4	99	85.878	ENSSTOG00000004450	SCAF4	100	86.055	Ictidomys_tridecemlineatus
ENSCHIG00000008385	SCAF4	99	87.807	ENSJJAG00000019447	Scaf4	99	87.969	Jaculus_jaculus
ENSCHIG00000008385	SCAF4	97	60.805	ENSLACG00000013913	SCAF4	59	65.569	Latimeria_chalumnae
ENSCHIG00000008385	SCAF4	99	56.496	ENSLOCG00000009162	scaf4a	59	67.010	Lepisosteus_oculatus
ENSCHIG00000008385	SCAF4	99	92.588	ENSLAFG00000010710	SCAF4	100	91.923	Loxodonta_africana
ENSCHIG00000008385	SCAF4	100	91.214	ENSMFAG00000037668	SCAF4	100	90.698	Macaca_fascicularis
ENSCHIG00000008385	SCAF4	100	91.128	ENSMMUG00000001712	SCAF4	100	90.612	Macaca_mulatta
ENSCHIG00000008385	SCAF4	100	90.964	ENSMNEG00000032966	SCAF4	100	90.878	Macaca_nemestrina
ENSCHIG00000008385	SCAF4	99	91.036	ENSMLEG00000039674	SCAF4	100	91.036	Mandrillus_leucophaeus
ENSCHIG00000008385	SCAF4	99	76.174	ENSMGAG00000014515	SCAF4	59	82.827	Meleagris_gallopavo
ENSCHIG00000008385	SCAF4	99	87.566	ENSMAUG00000013307	Scaf4	100	87.975	Mesocricetus_auratus
ENSCHIG00000008385	SCAF4	100	91.906	ENSMICG00000005256	SCAF4	100	92.776	Microcebus_murinus
ENSCHIG00000008385	SCAF4	100	84.448	ENSMOCG00000012087	Scaf4	100	85.752	Microtus_ochrogaster
ENSCHIG00000008385	SCAF4	100	84.394	ENSMODG00000021040	SCAF4	100	83.784	Monodelphis_domestica
ENSCHIG00000008385	SCAF4	100	82.219	MGP_CAROLIEiJ_G0020944	Scaf4	95	89.103	Mus_caroli
ENSCHIG00000008385	SCAF4	100	82.570	ENSMUSG00000022983	Scaf4	95	89.046	Mus_musculus
ENSCHIG00000008385	SCAF4	100	80.941	MGP_PahariEiJ_G0016649	Scaf4	97	85.385	Mus_pahari
ENSCHIG00000008385	SCAF4	100	82.855	MGP_SPRETEiJ_G0021850	Scaf4	96	89.161	Mus_spretus
ENSCHIG00000008385	SCAF4	100	90.603	ENSMPUG00000001078	SCAF4	100	90.603	Mustela_putorius_furo
ENSCHIG00000008385	SCAF4	99	78.000	ENSMLUG00000011472	SCAF4	79	82.524	Myotis_lucifugus
ENSCHIG00000008385	SCAF4	99	89.229	ENSNGAG00000005214	Scaf4	99	89.501	Nannospalax_galili
ENSCHIG00000008385	SCAF4	100	91.500	ENSNLEG00000003569	SCAF4	100	92.108	Nomascus_leucogenys
ENSCHIG00000008385	SCAF4	78	90.761	ENSOPRG00000007016	SCAF4	77	90.217	Ochotona_princeps
ENSCHIG00000008385	SCAF4	100	87.329	ENSODEG00000002718	SCAF4	100	87.586	Octodon_degus
ENSCHIG00000008385	SCAF4	71	57.143	ENSONIG00000004687	scaf4a	62	56.112	Oreochromis_niloticus
ENSCHIG00000008385	SCAF4	100	87.024	ENSOCUG00000008336	SCAF4	100	87.111	Oryctolagus_cuniculus
ENSCHIG00000008385	SCAF4	52	57.874	ENSORLG00000003420	scaf4b	67	59.072	Oryzias_latipes
ENSCHIG00000008385	SCAF4	99	86.505	ENSOGAG00000014653	SCAF4	95	91.337	Otolemur_garnettii
ENSCHIG00000008385	SCAF4	99	99.124	ENSOARG00000013894	SCAF4	99	99.124	Ovis_aries
ENSCHIG00000008385	SCAF4	100	91.847	ENSPPAG00000028535	SCAF4	100	91.934	Pan_paniscus
ENSCHIG00000008385	SCAF4	99	93.474	ENSPPRG00000000635	SCAF4	100	93.651	Panthera_pardus
ENSCHIG00000008385	SCAF4	99	90.837	ENSPTIG00000021578	SCAF4	99	87.219	Panthera_tigris_altaica
ENSCHIG00000008385	SCAF4	100	91.847	ENSPTRG00000013848	SCAF4	100	91.934	Pan_troglodytes
ENSCHIG00000008385	SCAF4	100	91.128	ENSPANG00000017332	SCAF4	100	91.473	Papio_anubis
ENSCHIG00000008385	SCAF4	65	63.041	ENSPKIG00000022408	scaf4a	90	65.727	Paramormyrops_kingsleyae
ENSCHIG00000008385	SCAF4	99	76.491	ENSPSIG00000014242	SCAF4	57	83.538	Pelodiscus_sinensis
ENSCHIG00000008385	SCAF4	61	86.591	ENSPCIG00000028183	SCAF4	91	81.586	Phascolarctos_cinereus
ENSCHIG00000008385	SCAF4	100	91.941	ENSPPYG00000011355	SCAF4	100	92.114	Pongo_abelii
ENSCHIG00000008385	SCAF4	100	82.183	ENSPCAG00000009998	SCAF4	100	80.279	Procavia_capensis
ENSCHIG00000008385	SCAF4	100	91.522	ENSPCOG00000018710	SCAF4	100	91.522	Propithecus_coquereli
ENSCHIG00000008385	SCAF4	100	93.444	ENSPVAG00000005220	SCAF4	100	93.531	Pteropus_vampyrus
ENSCHIG00000008385	SCAF4	77	57.478	ENSPNAG00000016892	scaf4a	60	62.815	Pygocentrus_nattereri
ENSCHIG00000008385	SCAF4	98	85.333	ENSRNOG00000002104	Scaf4	99	84.359	Rattus_norvegicus
ENSCHIG00000008385	SCAF4	99	89.658	ENSRBIG00000040007	SCAF4	99	88.860	Rhinopithecus_bieti
ENSCHIG00000008385	SCAF4	100	92.615	ENSRROG00000029488	SCAF4	100	92.528	Rhinopithecus_roxellana
ENSCHIG00000008385	SCAF4	100	83.246	ENSSHAG00000001581	SCAF4	100	82.635	Sarcophilus_harrisii
ENSCHIG00000008385	SCAF4	87	48.528	ENSSFOG00015006338	scaf4a	54	57.692	Scleropages_formosus
ENSCHIG00000008385	SCAF4	65	58.273	ENSSMAG00000003738	scaf4b	54	72.152	Scophthalmus_maximus
ENSCHIG00000008385	SCAF4	80	52.142	ENSSMAG00000017901	scaf4a	53	53.061	Scophthalmus_maximus
ENSCHIG00000008385	SCAF4	57	62.007	ENSSDUG00000012380	scaf4b	54	70.886	Seriola_dumerili
ENSCHIG00000008385	SCAF4	57	62.007	ENSSLDG00000023152	-	54	70.886	Seriola_lalandi_dorsalis
ENSCHIG00000008385	SCAF4	100	88.611	ENSSARG00000009994	SCAF4	100	88.956	Sorex_araneus
ENSCHIG00000008385	SCAF4	100	89.810	ENSSSCG00000021023	SCAF4	100	89.896	Sus_scrofa
ENSCHIG00000008385	SCAF4	75	70.923	ENSTGUG00000013464	SCAF4	57	85.714	Taeniopygia_guttata
ENSCHIG00000008385	SCAF4	50	59.489	ENSTRUG00000009536	-	66	57.664	Takifugu_rubripes
ENSCHIG00000008385	SCAF4	99	92.599	ENSTTRG00000010963	SCAF4	100	92.335	Tursiops_truncatus
ENSCHIG00000008385	SCAF4	100	91.783	ENSUAMG00000008860	SCAF4	100	91.696	Ursus_americanus
ENSCHIG00000008385	SCAF4	99	90.973	ENSUMAG00000016962	SCAF4	100	91.770	Ursus_maritimus
ENSCHIG00000008385	SCAF4	99	93.805	ENSVVUG00000002953	SCAF4	100	93.628	Vulpes_vulpes
ENSCHIG00000008385	SCAF4	99	54.734	ENSXETG00000007351	scaf4	63	62.625	Xenopus_tropicalis