EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000008440 (Gene tree)
Gene ID: 102180038
Gene Symbol: FAM172A
Alias: C5orf21|DKFZP564D172|Toupee
Full Name: family with sequence similarity 172 member A
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 405550 bases
Position: chr7:17059549-17465098
Accession: 102180038
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000004227	Arb2	PF09757.9	1.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000011615	FAM172A-201	1456	XM_018050039	ENSCHIP00000004227	416 (aa)	XP_017905528	UPI0005FAAE15
ENSCHIT00000011628	FAM172A-202	1343	-	ENSCHIP00000004239	352 (aa)	-	UPI00072F84BB

Gene Model

Click here to download ENSCHIG00000008440's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000008440's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000008440	FAM172A	100	97.115	ENSG00000113391	FAM172A	100	98.734	Homo_sapiens
ENSCHIG00000008440	FAM172A	54	38.528	ENSAPLG00000011555	-	97	38.528	Anas_platyrhynchos
ENSCHIG00000008440	FAM172A	100	86.779	ENSAPLG00000004055	FAM172A	97	87.871	Anas_platyrhynchos
ENSCHIG00000008440	FAM172A	91	87.302	ENSACAG00000013305	FAM172A	95	88.798	Anolis_carolinensis
ENSCHIG00000008440	FAM172A	89	88.949	ENSANAG00000035869	FAM172A	86	100.000	Aotus_nancymaae
ENSCHIG00000008440	FAM172A	100	99.760	ENSBTAG00000050195	FAM172A	100	99.760	Bos_taurus
ENSCHIG00000008440	FAM172A	100	97.596	ENSCJAG00000010444	FAM172A	100	97.596	Callithrix_jacchus
ENSCHIG00000008440	FAM172A	89	99.189	ENSCAFG00000008064	FAM172A	99	99.189	Canis_familiaris
ENSCHIG00000008440	FAM172A	100	97.837	ENSCAFG00020006210	FAM172A	100	97.837	Canis_lupus_dingo
ENSCHIG00000008440	FAM172A	64	98.872	ENSTSYG00000006286	FAM172A	85	98.872	Carlito_syrichta
ENSCHIG00000008440	FAM172A	54	86.726	ENSCAPG00000014103	-	100	86.726	Cavia_aperea
ENSCHIG00000008440	FAM172A	100	97.115	ENSCCAG00000023116	FAM172A	100	97.115	Cebus_capucinus
ENSCHIG00000008440	FAM172A	100	88.221	ENSCLAG00000005472	FAM172A	100	98.734	Chinchilla_lanigera
ENSCHIG00000008440	FAM172A	86	43.089	ENSCPBG00000004402	-	96	43.089	Chrysemys_picta_bellii
ENSCHIG00000008440	FAM172A	65	96.667	ENSCANG00000040412	FAM172A	92	96.667	Colobus_angolensis_palliatus
ENSCHIG00000008440	FAM172A	100	98.077	ENSDNOG00000004689	FAM172A	100	98.077	Dasypus_novemcinctus
ENSCHIG00000008440	FAM172A	65	96.667	ENSDORG00000013558	Fam172a	88	96.667	Dipodomys_ordii
ENSCHIG00000008440	FAM172A	79	40.303	ENSEBUG00000016097	-	62	40.303	Eptatretus_burgeri
ENSCHIG00000008440	FAM172A	97	94.815	ENSECAG00000018274	FAM172A	98	96.748	Equus_caballus
ENSCHIG00000008440	FAM172A	100	85.096	ENSEEUG00000002887	FAM172A	100	85.096	Erinaceus_europaeus
ENSCHIG00000008440	FAM172A	98	68.613	ENSELUG00000017647	fam172a	96	68.873	Esox_lucius
ENSCHIG00000008440	FAM172A	100	98.798	ENSFCAG00000025443	FAM172A	100	98.798	Felis_catus
ENSCHIG00000008440	FAM172A	86	43.175	ENSFALG00000006501	-	100	43.175	Ficedula_albicollis
ENSCHIG00000008440	FAM172A	87	87.879	ENSFALG00000009072	FAM172A	97	88.301	Ficedula_albicollis
ENSCHIG00000008440	FAM172A	100	86.779	ENSGALG00000014661	FAM172A	97	88.366	Gallus_gallus
ENSCHIG00000008440	FAM172A	100	90.144	ENSGAGG00000003839	FAM172A	97	91.089	Gopherus_agassizii
ENSCHIG00000008440	FAM172A	84	44.193	ENSGAGG00000022828	-	93	44.193	Gopherus_agassizii
ENSCHIG00000008440	FAM172A	100	96.875	ENSGGOG00000010296	FAM172A	100	96.875	Gorilla_gorilla
ENSCHIG00000008440	FAM172A	97	94.815	ENSHGLG00000011178	FAM172A	100	97.468	Heterocephalus_glaber_female
ENSCHIG00000008440	FAM172A	89	97.019	ENSHGLG00100013340	FAM172A	100	97.468	Heterocephalus_glaber_male
ENSCHIG00000008440	FAM172A	100	97.837	ENSSTOG00000009918	FAM172A	100	97.837	Ictidomys_tridecemlineatus
ENSCHIG00000008440	FAM172A	90	47.368	ENSLACG00000001532	si:ch73-41e3.7	100	47.368	Latimeria_chalumnae
ENSCHIG00000008440	FAM172A	100	74.940	ENSLOCG00000001629	fam172a	97	76.790	Lepisosteus_oculatus
ENSCHIG00000008440	FAM172A	65	96.667	ENSMFAG00000001171	FAM172A	92	96.667	Macaca_fascicularis
ENSCHIG00000008440	FAM172A	92	97.375	ENSMNEG00000039938	FAM172A	92	96.667	Macaca_nemestrina
ENSCHIG00000008440	FAM172A	100	98.077	ENSMICG00000030403	FAM172A	100	98.077	Microcebus_murinus
ENSCHIG00000008440	FAM172A	89	95.135	ENSMOCG00000003613	Fam172a	100	95.135	Microtus_ochrogaster
ENSCHIG00000008440	FAM172A	100	89.904	ENSMODG00000020131	FAM172A	97	90.594	Monodelphis_domestica
ENSCHIG00000008440	FAM172A	75	96.203	MGP_PahariEiJ_G0015818	Fam172a	100	96.203	Mus_pahari
ENSCHIG00000008440	FAM172A	89	98.108	ENSNGAG00000019570	Fam172a	100	98.108	Nannospalax_galili
ENSCHIG00000008440	FAM172A	65	96.667	ENSNLEG00000013903	FAM172A	89	96.667	Nomascus_leucogenys
ENSCHIG00000008440	FAM172A	89	89.189	ENSOANG00000011068	FAM172A	97	90.331	Ornithorhynchus_anatinus
ENSCHIG00000008440	FAM172A	97	97.037	ENSOCUG00000007299	FAM172A	96	97.037	Oryctolagus_cuniculus
ENSCHIG00000008440	FAM172A	100	96.154	ENSOGAG00000015189	FAM172A	100	96.154	Otolemur_garnettii
ENSCHIG00000008440	FAM172A	92	96.867	ENSOARG00000016711	FAM172A	87	96.867	Ovis_aries
ENSCHIG00000008440	FAM172A	65	97.037	ENSPPAG00000030542	FAM172A	92	97.037	Pan_paniscus
ENSCHIG00000008440	FAM172A	100	98.798	ENSPPRG00000006653	FAM172A	100	98.798	Panthera_pardus
ENSCHIG00000008440	FAM172A	100	98.798	ENSPTIG00000012681	FAM172A	100	98.798	Panthera_tigris_altaica
ENSCHIG00000008440	FAM172A	65	97.037	ENSPTRG00000017074	FAM172A	92	97.037	Pan_troglodytes
ENSCHIG00000008440	FAM172A	65	96.667	ENSPANG00000011687	FAM172A	92	96.667	Papio_anubis
ENSCHIG00000008440	FAM172A	97	72.660	ENSPKIG00000012314	fam172a	96	83.516	Paramormyrops_kingsleyae
ENSCHIG00000008440	FAM172A	100	94.952	ENSPEMG00000009604	-	100	98.734	Peromyscus_maniculatus_bairdii
ENSCHIG00000008440	FAM172A	100	89.663	ENSPCIG00000028612	FAM172A	97	90.594	Phascolarctos_cinereus
ENSCHIG00000008440	FAM172A	55	97.380	ENSPCOG00000024072	FAM172A	93	97.380	Propithecus_coquereli
ENSCHIG00000008440	FAM172A	65	93.680	ENSRNOG00000013844	Fam172a	99	93.680	Rattus_norvegicus
ENSCHIG00000008440	FAM172A	65	96.667	ENSRROG00000023807	FAM172A	92	96.667	Rhinopithecus_roxellana
ENSCHIG00000008440	FAM172A	100	97.356	ENSSBOG00000019860	FAM172A	100	97.356	Saimiri_boliviensis_boliviensis
ENSCHIG00000008440	FAM172A	100	89.423	ENSSHAG00000013743	FAM172A	97	90.099	Sarcophilus_harrisii
ENSCHIG00000008440	FAM172A	100	86.779	ENSSPUG00000008161	FAM172A	97	88.119	Sphenodon_punctatus
ENSCHIG00000008440	FAM172A	100	98.317	ENSSSCG00000027608	FAM172A	100	98.378	Sus_scrofa
ENSCHIG00000008440	FAM172A	80	46.726	ENSTGUG00000013623	-	100	46.726	Taeniopygia_guttata
ENSCHIG00000008440	FAM172A	91	86.579	ENSTGUG00000000715	FAM172A	100	86.579	Taeniopygia_guttata
ENSCHIG00000008440	FAM172A	78	56.970	ENSTNIG00000009902	fam172a	99	59.337	Tetraodon_nigroviridis
ENSCHIG00000008440	FAM172A	100	95.192	ENSTTRG00000001521	FAM172A	97	95.309	Tursiops_truncatus
ENSCHIG00000008440	FAM172A	100	98.798	ENSUMAG00000005442	FAM172A	100	98.798	Ursus_maritimus
ENSCHIG00000008440	FAM172A	100	97.837	ENSVVUG00000022112	FAM172A	100	97.837	Vulpes_vulpes
ENSCHIG00000008440	FAM172A	98	81.707	ENSXETG00000011592	fam172a	96	81.773	Xenopus_tropicalis
ENSCHIG00000008440	FAM172A	92	42.597	ENSXETG00000033027	-	100	42.597	Xenopus_tropicalis